BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is fabG [H]

Identifier: 13473519

GI number: 13473519

Start: 3316803

End: 3317573

Strand: Direct

Name: fabG [H]

Synonym: mlr4150

Alternate gene names: 13473519

Gene position: 3316803-3317573 (Clockwise)

Preceding gene: 13473514

Following gene: 13473520

Centisome position: 47.14

GC content: 66.28

Gene sequence:

>771_bases
GTGGTTTCGAAAGCCGAATTCGAAGGCCGCACTGTCGTCGTCACCGGTGCCGGCGGCGGCCTTGGCTCGGCGATCGTCGC
ATTGCTGGCCGGAAGGGGCGCCCGAGTGGTCGGCTGCGACCAGTCGCAGGAGGCGCTGGCAAGCCCGCACCTTGCCTCGC
GCCATGTCTTCAACCTTCTCGACAGGGCTTCGATCGAGGCGGGGATCGCCGCCGTGCTGGACAAGGACGGCGTGCCCGAC
ATCCTGATCAACAATGCCGGCTGGACGCGCGCCGAGACGATTTCCGCGCTCGATGCCGACAGGATCGAACACGAGCTCGA
CCTCAATCTGACCGGGGTGATGATGTTCGCCGACCCTATCGCCAAGGCAATGGCGGCGCGCGGCTCGGGCAGCGTCGTCT
TCATCTCCTCCGTCAACGCCATCGCGCATTTCGGCAATCCGGCCTACGCCGCGGCCAAGGCCGGCATCAACGCCTATGCC
AAATCGATCGCCGTCGAACTCGGCCGCCGTGGCGTACGCGCCAATGTCGTCTGCCCCGGATCGATCCGCACCGCCGCCTG
GGACCATCGCCTGGCCAAGGATCCGGAAATCCTGGGCAAGCTCAAGCGGCTCTACCCACTCGGCCGCATCGTCGACGCCT
CGGAAGTGGCGGAAGCCGTGGCTTTCCTTGCATCCGACCGCGCCTCGGGCATAACAGGCGTGGTGATGCCCGTGGATGCC
GGACTGACCGCCGGCTGCCTGCCGTTCATCGACGACATATTGGGAGCGTGA

Upstream 100 bases:

>100_bases
CGAGGAATTCACGGCATGCAAGCGGATTATCATGTTGCTTAATTACATTCTTTTCAGTAGCCTGCCGGCATCTGCCTGAC
CTGCGGGAGGAGCAAGCGCC

Downstream 100 bases:

>100_bases
CCATGACCGACGTCCTGTTTCGCAACCTGTCGAAATCCTTCGGCCAACACCGGATCCTCGAGGACATCAACCTCGACATC
AAGACCGGCGAGTTCGTGGT

Product: 3-oxoacyl-[acyl-carrier-protein] reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MVSKAEFEGRTVVVTGAGGGLGSAIVALLAGRGARVVGCDQSQEALASPHLASRHVFNLLDRASIEAGIAAVLDKDGVPD
ILINNAGWTRAETISALDADRIEHELDLNLTGVMMFADPIAKAMAARGSGSVVFISSVNAIAHFGNPAYAAAKAGINAYA
KSIAVELGRRGVRANVVCPGSIRTAAWDHRLAKDPEILGKLKRLYPLGRIVDASEVAEAVAFLASDRASGITGVVMPVDA
GLTAGCLPFIDDILGA

Sequences:

>Translated_256_residues
MVSKAEFEGRTVVVTGAGGGLGSAIVALLAGRGARVVGCDQSQEALASPHLASRHVFNLLDRASIEAGIAAVLDKDGVPD
ILINNAGWTRAETISALDADRIEHELDLNLTGVMMFADPIAKAMAARGSGSVVFISSVNAIAHFGNPAYAAAKAGINAYA
KSIAVELGRRGVRANVVCPGSIRTAAWDHRLAKDPEILGKLKRLYPLGRIVDASEVAEAVAFLASDRASGITGVVMPVDA
GLTAGCLPFIDDILGA
>Mature_256_residues
MVSKAEFEGRTVVVTGAGGGLGSAIVALLAGRGARVVGCDQSQEALASPHLASRHVFNLLDRASIEAGIAAVLDKDGVPD
ILINNAGWTRAETISALDADRIEHELDLNLTGVMMFADPIAKAMAARGSGSVVFISSVNAIAHFGNPAYAAAKAGINAYA
KSIAVELGRRGVRANVVCPGSIRTAAWDHRLAKDPEILGKLKRLYPLGRIVDASEVAEAVAFLASDRASGITGVVMPVDA
GLTAGCLPFIDDILGA

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=32.2709163346614, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=30.7692307692308, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=28.2157676348548, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI4503301, Length=260, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=26.7206477732794, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=29.1338582677165, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI19923817, Length=254, Percent_Identity=30.3149606299213, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI20149619, Length=199, Percent_Identity=28.643216080402, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=31.9796954314721, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI31542939, Length=252, Percent_Identity=26.5873015873016, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI126723750, Length=260, Percent_Identity=27.3076923076923, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40807363, Length=225, Percent_Identity=29.3333333333333, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=25.8333333333333, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=29.1497975708502, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1787335, Length=242, Percent_Identity=37.603305785124, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=35.3174603174603, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=32.6612903225806, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=31.5573770491803, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=25.1028806584362, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=27.710843373494, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.5573770491803, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=27.6422764227642, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=33.1967213114754, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17555706, Length=241, Percent_Identity=34.0248962655602, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=30.3149606299213, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.3253012048193, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.9160305343511, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=31.8548387096774, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.6259541984733, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=264, Percent_Identity=28.7878787878788, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=30, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=28.735632183908, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=26.4367816091954, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=29.9242424242424, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=242, Percent_Identity=30.1652892561983, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=29.5546558704453, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=26.5384615384615, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=26.865671641791, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=262, Percent_Identity=29.0076335877863, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=27.0992366412214, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=244, Percent_Identity=28.2786885245902, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=26.8939393939394, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=268, Percent_Identity=27.9850746268657, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=242, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=253, Percent_Identity=27.6679841897233, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=27.4131274131274, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=29.4820717131474, Blast_Score=82, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6322861, Length=226, Percent_Identity=27.8761061946903, Blast_Score=69, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=32.9501915708812, Blast_Score=110, Evalue=9e-25,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=34.1463414634146, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28571526, Length=263, Percent_Identity=33.0798479087452, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=32.421875, Blast_Score=104, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=32.1138211382114, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=31.496062992126, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=29.8319327731092, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=28.90625, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18859837, Length=196, Percent_Identity=31.1224489795918, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355631, Length=179, Percent_Identity=30.7262569832402, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26351; Mature: 26351

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKAEFEGRTVVVTGAGGGLGSAIVALLAGRGARVVGCDQSQEALASPHLASRHVFNLL
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCHHHHHHHHHH
DRASIEAGIAAVLDKDGVPDILINNAGWTRAETISALDADRIEHELDLNLTGVMMFADPI
HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEHEEHHHHH
AKAMAARGSGSVVFISSVNAIAHFGNPAYAAAKAGINAYAKSIAVELGRRGVRANVVCPG
HHHHHCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SIRTAAWDHRLAKDPEILGKLKRLYPLGRIVDASEVAEAVAFLASDRASGITGVVMPVDA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
GLTAGCLPFIDDILGA
CCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVSKAEFEGRTVVVTGAGGGLGSAIVALLAGRGARVVGCDQSQEALASPHLASRHVFNLL
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHCCCCHHHHHHHHHH
DRASIEAGIAAVLDKDGVPDILINNAGWTRAETISALDADRIEHELDLNLTGVMMFADPI
HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEHEEHHHHH
AKAMAARGSGSVVFISSVNAIAHFGNPAYAAAKAGINAYAKSIAVELGRRGVRANVVCPG
HHHHHCCCCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SIRTAAWDHRLAKDPEILGKLKRLYPLGRIVDASEVAEAVAFLASDRASGITGVVMPVDA
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECC
GLTAGCLPFIDDILGA
CCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]