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The map label for this gene is ytfH [H]

Identifier: 13472337

GI number: 13472337

Start: 2103017

End: 2103385

Strand: Direct

Name: ytfH [H]

Synonym: mlr2600

Alternate gene names: 13472337

Gene position: 2103017-2103385 (Clockwise)

Preceding gene: 13472334

Following gene: 13472341

Centisome position: 29.89

GC content: 62.6

Gene sequence:

>369_bases
TTGTTACTGAGGCACCCGCATAACACCGAAGACTGTCGCGCGATTTCGGAAATCCTGCAGCGCGTGGGTGACAAATGGAC
CGTGCTCGTGGTCGGCAAGCTCGGCCACGGACCGCTGCGTTTCAACGAGCTGCGCGCCGCTGTCGGCGGCATCTCGCAGA
AGATGTTGACCACAACCTTGCGCGGCCTGGAACGCGACGGCTTCGTCACCCGCACCGTGTTTCCGACCATTCCGCCGCGC
GTCGACTACGAACTGACCGAACTCGGGCACGAACTGTTGATCCCGGTCAGCGCGCTTGGCGAATGGGCGCGCAGGAACAC
GCAGCGTGTGCGGGAGGCACGCGAAAAATTCGACGGCATGCATGGTTGA

Upstream 100 bases:

>100_bases
CTTTGACATGGGGGCTCTCCATTCCAGTAAAAAGCTGGTATCGTTTAGATACCGGCGCTATATGAGATACTGTCAACTGC
CGACGCAAGGAGGCACCGTT

Downstream 100 bases:

>100_bases
AGCCCTTGCGTGGCAAGGGATCCGAAGTTTTGCGTTGAGCGGAATTGCCTGGACGGCAATTAGAGTCGTGGTTCTCAAAA
CGCGATCCGGCAATGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MLLRHPHNTEDCRAISEILQRVGDKWTVLVVGKLGHGPLRFNELRAAVGGISQKMLTTTLRGLERDGFVTRTVFPTIPPR
VDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDGMHG

Sequences:

>Translated_122_residues
MLLRHPHNTEDCRAISEILQRVGDKWTVLVVGKLGHGPLRFNELRAAVGGISQKMLTTTLRGLERDGFVTRTVFPTIPPR
VDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDGMHG
>Mature_122_residues
MLLRHPHNTEDCRAISEILQRVGDKWTVLVVGKLGHGPLRFNELRAAVGGISQKMLTTTLRGLERDGFVTRTVFPTIPPR
VDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDGMHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=108, Percent_Identity=39.8148148148148, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13838; Mature: 13838

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRHPHNTEDCRAISEILQRVGDKWTVLVVGKLGHGPLRFNELRAAVGGISQKMLTTTL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGLERDGFVTRTVFPTIPPRVDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDGM
HHHCCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HG
CC
>Mature Secondary Structure
MLLRHPHNTEDCRAISEILQRVGDKWTVLVVGKLGHGPLRFNELRAAVGGISQKMLTTTL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
RGLERDGFVTRTVFPTIPPRVDYELTELGHELLIPVSALGEWARRNTQRVREAREKFDGM
HHHCCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]