Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is mocC [H]
Identifier: 13472217
GI number: 13472217
Start: 1982624
End: 1983523
Strand: Direct
Name: mocC [H]
Synonym: mlr2437
Alternate gene names: 13472217
Gene position: 1982624-1983523 (Clockwise)
Preceding gene: 13472216
Following gene: 13472219
Centisome position: 28.18
GC content: 62.78
Gene sequence:
>900_bases GTGACGGTTCGCATCGGCATCAATCCGATCACCTGGACCAATGATGACGTGCCGGAACTCGGCGGCGATACGCCGCTCGA AGTGTGTCTGAGCGAAACCAGACAAGCCGGCTATGCCGGCACCGAACTCGGCGGCAAGTTTCCGCGCTGCTCGGCCGAAC TGAAGCCGATCATGAACCGCTATGGCCTTGCGGTGATTTCCGGCTGGTATGATGGCCGCTGCGACGAGAAGGATGTCGGC GCCGAAATGGATGCGATCAGGCCGCATCTCCAGCTCTTGAAGGATATGGGCTCCACCCATGTCGTCTATGCCGACACCTC GCGCGGGCGCCACAACGCCATCTGGGGACCGATCTCGCAACGCCCGGCCTTGAGCCCGGAAGAATGGCCGGCCTATGGCC GCAAGCTGACCGCACTCGCTGAAAGGATGGCGGATTTCGGCGTGCGCATGGCCTTTCACCACCACATGGGAACCATCGTC GAGACCGATGCCGAGGTCGGCCTGCTGATGCGGCACACCGGCGAGGCGGTCGGCCTGCTCTACGACACCGGCCATTCGAT CTTCTCGGGCGGCGACCCGCTCGCCTTGATCAAGGCGCAGGTCAAACGGGTCGTGCATGTGCATTGCAAGGACGCGCGCA AACCCGTGCTCGAGCGCGCGCGCGCCGAGGACATGAGTTTCATGGGTGCCGTCATGGACGGGATCTTCACCGTGCCCGGC GACGGCGTCATCGACTATCCCGCCATTTTGCGCGTGCTGGCCGACAATGGTTACAGCGGCTGGCTGGTCGTCGAGGCCGA GCAGGATCCCAACAAGGCCAACCCGCTGACCTATGCGACGATGGGATTTAAGAACCTATCGCGCATGGCGAGGCAAGCCG GATTTACCGTCATGGAATGA
Upstream 100 bases:
>100_bases CGGTGCGCAACACGGCCGAGCATGCGCGCCGCGACATGACGCTGCTGGCTGGACTGACCCGCCACCACCTCGACCAATCG AAGCAATCAGGAGTTCGCCC
Downstream 100 bases:
>100_bases TCGAGGCCGCCACGCGGCCTCCAGGGAACCAGTGCTGAGGAATGAAACTGGAAAAGGTGTGTTGAGATTCAGGTCAGGCC GAGCCGAAAATGACGGCTTT
Product: rhizopine catabolism protein MocC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTVRIGINPITWTNDDVPELGGDTPLEVCLSETRQAGYAGTELGGKFPRCSAELKPIMNRYGLAVISGWYDGRCDEKDVG AEMDAIRPHLQLLKDMGSTHVVYADTSRGRHNAIWGPISQRPALSPEEWPAYGRKLTALAERMADFGVRMAFHHHMGTIV ETDAEVGLLMRHTGEAVGLLYDTGHSIFSGGDPLALIKAQVKRVVHVHCKDARKPVLERARAEDMSFMGAVMDGIFTVPG DGVIDYPAILRVLADNGYSGWLVVEAEQDPNKANPLTYATMGFKNLSRMARQAGFTVME
Sequences:
>Translated_299_residues MTVRIGINPITWTNDDVPELGGDTPLEVCLSETRQAGYAGTELGGKFPRCSAELKPIMNRYGLAVISGWYDGRCDEKDVG AEMDAIRPHLQLLKDMGSTHVVYADTSRGRHNAIWGPISQRPALSPEEWPAYGRKLTALAERMADFGVRMAFHHHMGTIV ETDAEVGLLMRHTGEAVGLLYDTGHSIFSGGDPLALIKAQVKRVVHVHCKDARKPVLERARAEDMSFMGAVMDGIFTVPG DGVIDYPAILRVLADNGYSGWLVVEAEQDPNKANPLTYATMGFKNLSRMARQAGFTVME >Mature_298_residues TVRIGINPITWTNDDVPELGGDTPLEVCLSETRQAGYAGTELGGKFPRCSAELKPIMNRYGLAVISGWYDGRCDEKDVGA EMDAIRPHLQLLKDMGSTHVVYADTSRGRHNAIWGPISQRPALSPEEWPAYGRKLTALAERMADFGVRMAFHHHMGTIVE TDAEVGLLMRHTGEAVGLLYDTGHSIFSGGDPLALIKAQVKRVVHVHCKDARKPVLERARAEDMSFMGAVMDGIFTVPGD GVIDYPAILRVLADNGYSGWLVVEAEQDPNKANPLTYATMGFKNLSRMARQAGFTVME
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 32785; Mature: 32654
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRIGINPITWTNDDVPELGGDTPLEVCLSETRQAGYAGTELGGKFPRCSAELKPIMNR CEEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YGLAVISGWYDGRCDEKDVGAEMDAIRPHLQLLKDMGSTHVVYADTSRGRHNAIWGPISQ CCEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCC RPALSPEEWPAYGRKLTALAERMADFGVRMAFHHHMGTIVETDAEVGLLMRHTGEAVGLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEEE YDTGHSIFSGGDPLALIKAQVKRVVHVHCKDARKPVLERARAEDMSFMGAVMDGIFTVPG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC DGVIDYPAILRVLADNGYSGWLVVEAEQDPNKANPLTYATMGFKNLSRMARQAGFTVME CCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVRIGINPITWTNDDVPELGGDTPLEVCLSETRQAGYAGTELGGKFPRCSAELKPIMNR EEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH YGLAVISGWYDGRCDEKDVGAEMDAIRPHLQLLKDMGSTHVVYADTSRGRHNAIWGPISQ CCEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCC RPALSPEEWPAYGRKLTALAERMADFGVRMAFHHHMGTIVETDAEVGLLMRHTGEAVGLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEEE YDTGHSIFSGGDPLALIKAQVKRVVHVHCKDARKPVLERARAEDMSFMGAVMDGIFTVPG EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC DGVIDYPAILRVLADNGYSGWLVVEAEQDPNKANPLTYATMGFKNLSRMARQAGFTVME CCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHHCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]