Click here to switch to the map view.

The map label for this gene is chaC [H]

Identifier: 13472077

GI number: 13472077

Start: 1815360

End: 1816091

Strand: Reverse

Name: chaC [H]

Synonym: mll2256

Alternate gene names: 13472077

Gene position: 1816091-1815360 (Counterclockwise)

Preceding gene: 13472078

Following gene: 13472076

Centisome position: 25.81

GC content: 68.72

Gene sequence:

>732_bases
ATGAACAAGGCCATTTCCGCCGCACCGGGCAAGTCCGTACCGCGCAAGACGCCGATGGCGCTGACCGAGGCGCTGGTGGC
GCGGACCATGCGGGTGGTCGAGGATGCCGGGCCGACGCCGGGCATGGTCCATATGCTGGACGCCGACTATGCGCGGTTTC
GCGACGAGATCCTGGCCTCGGCACCGCCTGGACCGCTGAAGCTGTTCGCCTATGGCTCGCTGCTGTGGAAGCCGGCCGGC
GAGGTCAGGGGTGGCGAGCGGGCGGTGGCGCGCGGCTGGCACCGGTCATTCTGCTTCACGGTGCAGCGCTTTCGCGGCAC
GCTCGAGCAGCCCGGCCTGATGATGGCGCTCGATCGTGGCGGCCAGTGCCAGGGCATGGTGTTCGAGATCGCCGCGCCGG
TCGCCGAAAATCTGGAAGCGCTGCTGCGCCGCGAGATGACCATTCTGCCCGCCGTCAACGTGCCGCGCTGGCTGCAGGTC
AGCACGGAAGGCGGGGCGAGCCGTGCGCTCGGCTTTGTCGTCGATCCGGCCAATCCGCGCTATGCCGGCAAGCTCGACAA
GTCCGCGGTCGCGGCGACTTTGGCCAGGGCCGTCGGCCACTGGGGCTCGGGCGCGCAATATCTGTTCGAGACGATCCGCC
ACCTTGACGCCTGCGGCATACGCGACCGCAATCTATGGCAGTTGCAGGAACTGGTGGCGCAGGAGATCGGCCGCACCCAT
GCGGCTCCCTAG

Upstream 100 bases:

>100_bases
GTGCCGCGCACGCCCGGCATTGACCGGCGGATTTCGCGCCGGTCGCCCTTGAGAATCCCCCAGCCTTCGGCAACATGGCG
GCAAGGCTGGGAGCGCAAGG

Downstream 100 bases:

>100_bases
CCGCCCGCCGATATTTCGGGCGCTCCGATCTTCCGCTTGACGAACATATATCTCTGCGGTTATACGTAAACCAATAGCCA
ACGGGTTATCGATCTGAGAT

Product: cation transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNKAISAAPGKSVPRKTPMALTEALVARTMRVVEDAGPTPGMVHMLDADYARFRDEILASAPPGPLKLFAYGSLLWKPAG
EVRGGERAVARGWHRSFCFTVQRFRGTLEQPGLMMALDRGGQCQGMVFEIAAPVAENLEALLRREMTILPAVNVPRWLQV
STEGGASRALGFVVDPANPRYAGKLDKSAVAATLARAVGHWGSGAQYLFETIRHLDACGIRDRNLWQLQELVAQEIGRTH
AAP

Sequences:

>Translated_243_residues
MNKAISAAPGKSVPRKTPMALTEALVARTMRVVEDAGPTPGMVHMLDADYARFRDEILASAPPGPLKLFAYGSLLWKPAG
EVRGGERAVARGWHRSFCFTVQRFRGTLEQPGLMMALDRGGQCQGMVFEIAAPVAENLEALLRREMTILPAVNVPRWLQV
STEGGASRALGFVVDPANPRYAGKLDKSAVAATLARAVGHWGSGAQYLFETIRHLDACGIRDRNLWQLQELVAQEIGRTH
AAP
>Mature_243_residues
MNKAISAAPGKSVPRKTPMALTEALVARTMRVVEDAGPTPGMVHMLDADYARFRDEILASAPPGPLKLFAYGSLLWKPAG
EVRGGERAVARGWHRSFCFTVQRFRGTLEQPGLMMALDRGGQCQGMVFEIAAPVAENLEALLRREMTILPAVNVPRWLQV
STEGGASRALGFVVDPANPRYAGKLDKSAVAATLARAVGHWGSGAQYLFETIRHLDACGIRDRNLWQLQELVAQEIGRTH
AAP

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Escherichia coli, GI145693119, Length=164, Percent_Identity=35.9756097560976, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 26398; Mature: 26398

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAISAAPGKSVPRKTPMALTEALVARTMRVVEDAGPTPGMVHMLDADYARFRDEILAS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHC
APPGPLKLFAYGSLLWKPAGEVRGGERAVARGWHRSFCFTVQRFRGTLEQPGLMMALDRG
CCCCCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GQCQGMVFEIAAPVAENLEALLRREMTILPAVNVPRWLQVSTEGGASRALGFVVDPANPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
YAGKLDKSAVAATLARAVGHWGSGAQYLFETIRHLDACGIRDRNLWQLQELVAQEIGRTH
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
AAP
CCC
>Mature Secondary Structure
MNKAISAAPGKSVPRKTPMALTEALVARTMRVVEDAGPTPGMVHMLDADYARFRDEILAS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHC
APPGPLKLFAYGSLLWKPAGEVRGGERAVARGWHRSFCFTVQRFRGTLEQPGLMMALDRG
CCCCCEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GQCQGMVFEIAAPVAENLEALLRREMTILPAVNVPRWLQVSTEGGASRALGFVVDPANPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCCC
YAGKLDKSAVAATLARAVGHWGSGAQYLFETIRHLDACGIRDRNLWQLQELVAQEIGRTH
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
AAP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]