Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472073

Identifier: 13472073

GI number: 13472073

Start: 1813287

End: 1813934

Strand: Reverse

Name: 13472073

Synonym: mll2250

Alternate gene names: NA

Gene position: 1813934-1813287 (Counterclockwise)

Preceding gene: 13472074

Following gene: 13472072

Centisome position: 25.78

GC content: 63.12

Gene sequence:

>648_bases
ATGGATCAGGCAGGCGCATCGCTGGCTGTCGATCATCTTCACGGCGACCGTCGTCGCCAATTTCGTCACCATGGCGTTTG
GACAGCCGCCCGCCTGGGTGGTCTATTCGCCACTGCCGCCGCTCTTCCTTATGCTGTTCAGCGGCCTTTATATGTTCGTG
CTGCCCTATGTCGCGAAAGGACGCAACACACAGCGGGTCAACGGATAGGAGGAAAGCGCATGGCCAAATCGACCGCTGCC
AAGGCCGAGCGGAAGCTGCTTTCGGGCGGCAATCCGCAGATCGCCAAGGGTTATGGCGATGCTCCCGTGCAGGCCTATAT
CGCGGCGATGCCGGGCTGGATGCGCGAGATGGGCGGGCGGCTCGACGCACTCATCGAGCGCGCCGTGCCCGGCGTGCACA
AGGCGGTCAAATGGAACTCGCCGCTCTATGGTATCGAAGGCGAGGGCTGGTTCCTCGGCCTCCATTGCCTCACAGGATAT
ATCAAGGTGGCCTTCTTTCGCGGCGCGTCGCTGAAGCCGGCGCCGCCGGGCGAATCCCGAAGCCGGGACACGCGCTACCT
CGACATCCATGAGGACGACGCGTTCGACGAGGCGCAATTCAGCGCCTGGGTAAAGCAGGCCAGCCAATTGCCTGGCGAGC
GCATGTGA

Upstream 100 bases:

>100_bases
AACGACGGCTGCGGCAATCTCATCCAGATCACGCAACTGGCGCGCTGGTAGCGCCCCCGGTTTCACACGTTTCACGGGAG
GTCATCTTGGACTGGAGCAC

Downstream 100 bases:

>100_bases
GCGCGCTATTGTTCATGTTTTGAGGAGAAGCAGCATGACCGGATTGCAGGAGAGCAAATCTCCCTCCGAACTGATCGACG
GCAGGATCATGGAACTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA
KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY
IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM

Sequences:

>Translated_215_residues
MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA
KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY
IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM
>Mature_215_residues
MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA
KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY
IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM

Specific function: Unknown

COG id: COG5649

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23593; Mature: 23593

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRER
CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TQHTAGQRIGGKRMAKSTAAKAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGR
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCHHHHHHCCH
LDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGYIKVAFFRGASLKPAPPGESR
HHHHHHHHCCHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRER
CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TQHTAGQRIGGKRMAKSTAAKAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGR
HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCHHHHHHCCH
LDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGYIKVAFFRGASLKPAPPGESR
HHHHHHHHCCHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA