| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472073
Identifier: 13472073
GI number: 13472073
Start: 1813287
End: 1813934
Strand: Reverse
Name: 13472073
Synonym: mll2250
Alternate gene names: NA
Gene position: 1813934-1813287 (Counterclockwise)
Preceding gene: 13472074
Following gene: 13472072
Centisome position: 25.78
GC content: 63.12
Gene sequence:
>648_bases ATGGATCAGGCAGGCGCATCGCTGGCTGTCGATCATCTTCACGGCGACCGTCGTCGCCAATTTCGTCACCATGGCGTTTG GACAGCCGCCCGCCTGGGTGGTCTATTCGCCACTGCCGCCGCTCTTCCTTATGCTGTTCAGCGGCCTTTATATGTTCGTG CTGCCCTATGTCGCGAAAGGACGCAACACACAGCGGGTCAACGGATAGGAGGAAAGCGCATGGCCAAATCGACCGCTGCC AAGGCCGAGCGGAAGCTGCTTTCGGGCGGCAATCCGCAGATCGCCAAGGGTTATGGCGATGCTCCCGTGCAGGCCTATAT CGCGGCGATGCCGGGCTGGATGCGCGAGATGGGCGGGCGGCTCGACGCACTCATCGAGCGCGCCGTGCCCGGCGTGCACA AGGCGGTCAAATGGAACTCGCCGCTCTATGGTATCGAAGGCGAGGGCTGGTTCCTCGGCCTCCATTGCCTCACAGGATAT ATCAAGGTGGCCTTCTTTCGCGGCGCGTCGCTGAAGCCGGCGCCGCCGGGCGAATCCCGAAGCCGGGACACGCGCTACCT CGACATCCATGAGGACGACGCGTTCGACGAGGCGCAATTCAGCGCCTGGGTAAAGCAGGCCAGCCAATTGCCTGGCGAGC GCATGTGA
Upstream 100 bases:
>100_bases AACGACGGCTGCGGCAATCTCATCCAGATCACGCAACTGGCGCGCTGGTAGCGCCCCCGGTTTCACACGTTTCACGGGAG GTCATCTTGGACTGGAGCAC
Downstream 100 bases:
>100_bases GCGCGCTATTGTTCATGTTTTGAGGAGAAGCAGCATGACCGGATTGCAGGAGAGCAAATCTCCCTCCGAACTGATCGACG GCAGGATCATGGAACTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM
Sequences:
>Translated_215_residues MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM >Mature_215_residues MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRERTQHTAGQRIGGKRMAKSTAA KAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGRLDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGY IKVAFFRGASLKPAPPGESRSRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM
Specific function: Unknown
COG id: COG5649
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23593; Mature: 23593
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRER CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQHTAGQRIGGKRMAKSTAAKAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGR HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCHHHHHHCCH LDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGYIKVAFFRGASLKPAPPGESR HHHHHHHHCCHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC SRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDQAGASLAVDHLHGDRRRQFRHHGVWTAARLGGLFATAAALPYAVQRPLYVRAALCRER CCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH TQHTAGQRIGGKRMAKSTAAKAERKLLSGGNPQIAKGYGDAPVQAYIAAMPGWMREMGGR HHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCHHHHHHCCH LDALIERAVPGVHKAVKWNSPLYGIEGEGWFLGLHCLTGYIKVAFFRGASLKPAPPGESR HHHHHHHHCCHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC SRDTRYLDIHEDDAFDEAQFSAWVKQASQLPGERM CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA