| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472049
Identifier: 13472049
GI number: 13472049
Start: 1794612
End: 1795010
Strand: Reverse
Name: 13472049
Synonym: mll2220
Alternate gene names: NA
Gene position: 1795010-1794612 (Counterclockwise)
Preceding gene: 13472050
Following gene: 13472048
Centisome position: 25.51
GC content: 63.16
Gene sequence:
>399_bases ATGGACAAGGCGATGGCGGCCAAGGTCAAATTGAAGCAACTGCCCGGGTCGTACGCGATTTCGCGGCTCGGGGCGGGTGA CGGCATTCCGGGCTGGGCGGACGGGCCGGGCTTCGTCAGCATCACCAGGACCGACGACGAGCTTTCGATCACGTGCCTGC AGGATCGCGTTCCAGGCACGGTCAAGCACGATGGCGACTGGGTCGCCTTCAAATTGCAGGGGCCCTTTGCTTTCGACGAA ACCGGCATCGTGCTGTCGGTCATCCAGCCGCTGTCGGAAAACGGGCTGGGCATCTTCCTGGTGTCCACCTTCGACGGCGA TCATCTGCTGGTGAAAGCGGCGGACCAGGAAGCGGCGCGACAGCATCTGGTCGAGGCAGGACACACGCTGTTGTCGTGA
Upstream 100 bases:
>100_bases CAAAAGGCATGGCTATACGATCAACCGGGAGGAGCCGTTCATGGGCGGCATGACGGTCTATATGAGCAAGAAATTGACGC GATAGCGGACAATCGGAGGC
Downstream 100 bases:
>100_bases GCGAAAAAGGTGCTGACGTGATGCAAGAAGCCGTCCGCGACCTTTGCAGGATTGCTCCCAAGCTGACGGACGACCTCAAT TTCGAGCAAACTACCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS
Sequences:
>Translated_132_residues MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS >Mature_132_residues MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS
Specific function: Unknown
COG id: COG3603
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14030; Mature: 14030
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGT CCCCHHHEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC VKHDGDWVAFKLQGPFAFDETGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAAR EEECCCEEEEEECCCEEECCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEEEECCHHHHH QHLVEAGHTLLS HHHHHHHHHHCC >Mature Secondary Structure MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGT CCCCHHHEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC VKHDGDWVAFKLQGPFAFDETGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAAR EEECCCEEEEEECCCEEECCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEEEECCHHHHH QHLVEAGHTLLS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA