Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472049

Identifier: 13472049

GI number: 13472049

Start: 1794612

End: 1795010

Strand: Reverse

Name: 13472049

Synonym: mll2220

Alternate gene names: NA

Gene position: 1795010-1794612 (Counterclockwise)

Preceding gene: 13472050

Following gene: 13472048

Centisome position: 25.51

GC content: 63.16

Gene sequence:

>399_bases
ATGGACAAGGCGATGGCGGCCAAGGTCAAATTGAAGCAACTGCCCGGGTCGTACGCGATTTCGCGGCTCGGGGCGGGTGA
CGGCATTCCGGGCTGGGCGGACGGGCCGGGCTTCGTCAGCATCACCAGGACCGACGACGAGCTTTCGATCACGTGCCTGC
AGGATCGCGTTCCAGGCACGGTCAAGCACGATGGCGACTGGGTCGCCTTCAAATTGCAGGGGCCCTTTGCTTTCGACGAA
ACCGGCATCGTGCTGTCGGTCATCCAGCCGCTGTCGGAAAACGGGCTGGGCATCTTCCTGGTGTCCACCTTCGACGGCGA
TCATCTGCTGGTGAAAGCGGCGGACCAGGAAGCGGCGCGACAGCATCTGGTCGAGGCAGGACACACGCTGTTGTCGTGA

Upstream 100 bases:

>100_bases
CAAAAGGCATGGCTATACGATCAACCGGGAGGAGCCGTTCATGGGCGGCATGACGGTCTATATGAGCAAGAAATTGACGC
GATAGCGGACAATCGGAGGC

Downstream 100 bases:

>100_bases
GCGAAAAAGGTGCTGACGTGATGCAAGAAGCCGTCCGCGACCTTTGCAGGATTGCTCCCAAGCTGACGGACGACCTCAAT
TTCGAGCAAACTACCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE
TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS

Sequences:

>Translated_132_residues
MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE
TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS
>Mature_132_residues
MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGTVKHDGDWVAFKLQGPFAFDE
TGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAARQHLVEAGHTLLS

Specific function: Unknown

COG id: COG3603

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14030; Mature: 14030

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGT
CCCCHHHEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
VKHDGDWVAFKLQGPFAFDETGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAAR
EEECCCEEEEEECCCEEECCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEEEECCHHHHH
QHLVEAGHTLLS
HHHHHHHHHHCC
>Mature Secondary Structure
MDKAMAAKVKLKQLPGSYAISRLGAGDGIPGWADGPGFVSITRTDDELSITCLQDRVPGT
CCCCHHHEEEHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC
VKHDGDWVAFKLQGPFAFDETGIVLSVIQPLSENGLGIFLVSTFDGDHLLVKAADQEAAR
EEECCCEEEEEECCCEEECCCCEEEEEEHHHCCCCCEEEEEEECCCCEEEEEECCHHHHH
QHLVEAGHTLLS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA