| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472029
Identifier: 13472029
GI number: 13472029
Start: 1775708
End: 1776457
Strand: Reverse
Name: 13472029
Synonym: mll2193
Alternate gene names: NA
Gene position: 1776457-1775708 (Counterclockwise)
Preceding gene: 13472030
Following gene: 13472027
Centisome position: 25.25
GC content: 69.07
Gene sequence:
>750_bases ATGCTGAGCGCCGGCTCCATCGCCTGGATCGGCGCGGTCTTCCTCGCCGCCGGTTTCGTCAAGGGGGTCGCCGGCATGGG CCTGCCGACCGTGGCGATGGGCCTGCTGGCGGTGACGATGCCGCCGGCCGAGGCCGCCGCCTTGCTTCTGATCCCGTCGC TGGTCACCAATCTCTGGCAGTTGTTCACCGGCCCCGCCTTCGCCGGCCTGTGCAGGCGGCTGTGGACGATGATGGCCGGC ATCATGCTGGGCGCCGTCGCGGGGGCAGGGGTGCTCACAGGCGCGCATGCGGGCGCGGCCTCTGTGGGGCTTGGGGCGGC GCTGGTGCTTTACGCCATCTTTGGCCTGTTCAAGCTCAGCTTCACCACGCCGGCGCGCCACGAGGCCTTGATGTCACCGC TGGTCGGCGTGGCGACAGGGCTGGTCACCGGCGCCACCGGCGTCTTCGTCATCCCGGCGGTGCCTTATCTGCAATCGCTG CGGCTGGAGAAGGAAGATCTCATCCAGGCGCTCGGCCTCTCCTTCACCGTCTCGACGGCGGCCCTTGCCATCGGCCTGTT CAGGACGGGCGCGCTGGCATCGCCGACGGCGCAGCTGACAGGCTCGATCCTGGCGCTGCTGCCAGCGCTGGCCGGCATGT TCATCGGCCAAGCGCTGCGGCAGGCGATGAGCGTCGAGACTTTTCGAAGGGTGTTTTTTGCGGGGTTGCTGGCGCTGGGA GTGTATCTCGCGCTGGAGGCGCTGCGGTGA
Upstream 100 bases:
>100_bases CGCGGATGCACGACGACTGTTCCCGCCAGCCACAATGCCGTGCCGGCAAAACCGGATGCCGATGCCGCTGACATGCTGCT GCATGATTGATCCCGTGGGC
Downstream 100 bases:
>100_bases GGTTGGCCTCACTCGGCAATGGACCGGATAACCCGCGCCGGGTTTCCGCCGACAAGCGTGTTCGCGGGAACGTCTTTCGT GACCACCGAGCCTGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLSAGSIAWIGAVFLAAGFVKGVAGMGLPTVAMGLLAVTMPPAEAAALLLIPSLVTNLWQLFTGPAFAGLCRRLWTMMAG IMLGAVAGAGVLTGAHAGAASVGLGAALVLYAIFGLFKLSFTTPARHEALMSPLVGVATGLVTGATGVFVIPAVPYLQSL RLEKEDLIQALGLSFTVSTAALAIGLFRTGALASPTAQLTGSILALLPALAGMFIGQALRQAMSVETFRRVFFAGLLALG VYLALEALR
Sequences:
>Translated_249_residues MLSAGSIAWIGAVFLAAGFVKGVAGMGLPTVAMGLLAVTMPPAEAAALLLIPSLVTNLWQLFTGPAFAGLCRRLWTMMAG IMLGAVAGAGVLTGAHAGAASVGLGAALVLYAIFGLFKLSFTTPARHEALMSPLVGVATGLVTGATGVFVIPAVPYLQSL RLEKEDLIQALGLSFTVSTAALAIGLFRTGALASPTAQLTGSILALLPALAGMFIGQALRQAMSVETFRRVFFAGLLALG VYLALEALR >Mature_249_residues MLSAGSIAWIGAVFLAAGFVKGVAGMGLPTVAMGLLAVTMPPAEAAALLLIPSLVTNLWQLFTGPAFAGLCRRLWTMMAG IMLGAVAGAGVLTGAHAGAASVGLGAALVLYAIFGLFKLSFTTPARHEALMSPLVGVATGLVTGATGVFVIPAVPYLQSL RLEKEDLIQALGLSFTVSTAALAIGLFRTGALASPTAQLTGSILALLPALAGMFIGQALRQAMSVETFRRVFFAGLLALG VYLALEALR
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25286; Mature: 25286
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSAGSIAWIGAVFLAAGFVKGVAGMGLPTVAMGLLAVTMPPAEAAALLLIPSLVTNLWQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFTGPAFAGLCRRLWTMMAGIMLGAVAGAGVLTGAHAGAASVGLGAALVLYAIFGLFKLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FTTPARHEALMSPLVGVATGLVTGATGVFVIPAVPYLQSLRLEKEDLIQALGLSFTVSTA CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH ALAIGLFRTGALASPTAQLTGSILALLPALAGMFIGQALRQAMSVETFRRVFFAGLLALG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLALEALR HHHHHHHCC >Mature Secondary Structure MLSAGSIAWIGAVFLAAGFVKGVAGMGLPTVAMGLLAVTMPPAEAAALLLIPSLVTNLWQ CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFTGPAFAGLCRRLWTMMAGIMLGAVAGAGVLTGAHAGAASVGLGAALVLYAIFGLFKLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH FTTPARHEALMSPLVGVATGLVTGATGVFVIPAVPYLQSLRLEKEDLIQALGLSFTVSTA CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH ALAIGLFRTGALASPTAQLTGSILALLPALAGMFIGQALRQAMSVETFRRVFFAGLLALG HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLALEALR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA