| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471990
Identifier: 13471990
GI number: 13471990
Start: 1742192
End: 1743577
Strand: Reverse
Name: 13471990
Synonym: mll2144
Alternate gene names: NA
Gene position: 1743577-1742192 (Counterclockwise)
Preceding gene: 13471992
Following gene: 13471986
Centisome position: 24.78
GC content: 64.43
Gene sequence:
>1386_bases GTGACACCCATGACATCCCGGCATTGCACCGAGGAGGTGCGCGGCCGTTTCCCGGCCCGGTTGCAAAACGATCGGGCCTT GCTAGAAAGGCCTGGGGCGGGTGGCATCGTGAGAGACCTCATGTTTGCCGATATCATCAGGCCGACCAGCTTGAGTTTTT CGCTGCTGCGGCGCTTCTGGCCGCAGCTCGTCGCGCTGGTGCTGGCCGGGGTGCTGGCCGGCGATCTGTTGCTGCAGCTG GCGGCGAAAGTGGCGCTCGCCAATCATTTCGCCGGGCTCGCCATGCTGACGCTGGTGGCGTTGGCGCAGCTGGTGGTGAC GGTGGCGATGTTCCATGTGCTGCGCCCCGGCTTGCCGCATCTCTTGGCCGCGCAGCGCGGCGCGGACAAGGCCGCCGAGG AGCAGGAGACTGCCGATCGTCGCGGCTCGCGGCTGGTGCGTATGGTCACCATCGCCCTCTTGCCGTTCTTTGCCTATTAC GCGGCCTGGGGGTTCCTCGGCGATATCGTGCGGCAATATTCGCGCGCCACGCTCGACCAGGCCGGTTTCGGCCAGAGCGC TGATGTGCTCGACGTGCTGGATTCGCGCTGGCTGCTGATCTCGGTGGCGGTGTCCTGGCTGATCCGCCGGGTGGCCAAGT TCATGCAGACGAAAACCAAGACCGCCTCGTTCTGGCAGATCGTCGTGGTGATCTGCGAGACCAACTGGATCTTCGTCGGT CTCTATGTGATCAGCCGCTGGAAGGATACGGCGCTGCAATGGCTGATGAGCCGCTCCTTCTGGTCGGTGCTGGAGGCGAC GGCCGACGGGCTGGCGAGCCCGGTGCCGGTGGCGAACGCGGCCCTGATGGTGCCGGTCGAGCTCACCTCGGTCGCGCCCT CGACGGTCGCCATCAACCTGTTCTTCTACATGCTCCTGCCGCTGATCTGGCTGGTCATGGCGGCGCTGATCTACGGCTAT GACGTGCGCGACGATGCCGCCTTGATGCGCGTACACAATCGGGTGGAGCGCTTCGGCAAGCGCTATGCCGGCCTGCCGAA ATTCCTGCGCGACTTCGTCGAGCATTTCATCGCCGGCTACCGCTCGCGCTACCTGCCGATCGCCAATGGCGTGCGGCTGA CGGTGAGCTCCAGCCTTCTGCTTCTGTGCACGCTGATCATCGGCTATCGCCTCATCGACTGGGGCGCTGCCTGGCTGTGG CTCGGCGCGACGCGGCTGATCGGCCCGCACGAACTCGATGTCTGGCAGATCCTCTCCCATGGCGTGACGCTGCTGTTCGG CAGCCCGTTCCAGGATTCCTCGACCGGCATTTTGATCGAGCCGATCAGGATATGTTTTCTCGCCGCCGTGCTGGAGATAG CGTTTTCGCTGTCAAAGGGTAGATGA
Upstream 100 bases:
>100_bases TCATCCACAGGGCGGCGAGAACAAGGCGTTTCATGGCGGTCCTTCCAGCGGTTTTCGAGGCCATCAATCAGCGCAGCAAT TCGACGGAATCAGGGCTGGC
Downstream 100 bases:
>100_bases GTTCCCTTCTCCCCGTGAACGGGGAGAAGGACGCTGTTATTTCGGCGGCCGCCGAAAGCGCAGATACCATGGGCGCTCAC TGCCAAGCCCCACGGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTPMTSRHCTEEVRGRFPARLQNDRALLERPGAGGIVRDLMFADIIRPTSLSFSLLRRFWPQLVALVLAGVLAGDLLLQL AAKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPHLLAAQRGADKAAEEQETADRRGSRLVRMVTIALLPFFAYY AAWGFLGDIVRQYSRATLDQAGFGQSADVLDVLDSRWLLISVAVSWLIRRVAKFMQTKTKTASFWQIVVVICETNWIFVG LYVISRWKDTALQWLMSRSFWSVLEATADGLASPVPVANAALMVPVELTSVAPSTVAINLFFYMLLPLIWLVMAALIYGY DVRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGYRSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLW LGATRLIGPHELDVWQILSHGVTLLFGSPFQDSSTGILIEPIRICFLAAVLEIAFSLSKGR
Sequences:
>Translated_461_residues MTPMTSRHCTEEVRGRFPARLQNDRALLERPGAGGIVRDLMFADIIRPTSLSFSLLRRFWPQLVALVLAGVLAGDLLLQL AAKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPHLLAAQRGADKAAEEQETADRRGSRLVRMVTIALLPFFAYY AAWGFLGDIVRQYSRATLDQAGFGQSADVLDVLDSRWLLISVAVSWLIRRVAKFMQTKTKTASFWQIVVVICETNWIFVG LYVISRWKDTALQWLMSRSFWSVLEATADGLASPVPVANAALMVPVELTSVAPSTVAINLFFYMLLPLIWLVMAALIYGY DVRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGYRSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLW LGATRLIGPHELDVWQILSHGVTLLFGSPFQDSSTGILIEPIRICFLAAVLEIAFSLSKGR >Mature_460_residues TPMTSRHCTEEVRGRFPARLQNDRALLERPGAGGIVRDLMFADIIRPTSLSFSLLRRFWPQLVALVLAGVLAGDLLLQLA AKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPHLLAAQRGADKAAEEQETADRRGSRLVRMVTIALLPFFAYYA AWGFLGDIVRQYSRATLDQAGFGQSADVLDVLDSRWLLISVAVSWLIRRVAKFMQTKTKTASFWQIVVVICETNWIFVGL YVISRWKDTALQWLMSRSFWSVLEATADGLASPVPVANAALMVPVELTSVAPSTVAINLFFYMLLPLIWLVMAALIYGYD VRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGYRSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLWL GATRLIGPHELDVWQILSHGVTLLFGSPFQDSSTGILIEPIRICFLAAVLEIAFSLSKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51346; Mature: 51215
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPMTSRHCTEEVRGRFPARLQNDRALLERPGAGGIVRDLMFADIIRPTSLSFSLLRRFW CCCCCCHHHHHHHHCCCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH PQLVALVLAGVLAGDLLLQLAAKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLAAQRGADKAAEEQETADRRGSRLVRMVTIALLPFFAYYAAWGFLGDIVRQYSRATLDQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGQSADVLDVLDSRWLLISVAVSWLIRRVAKFMQTKTKTASFWQIVVVICETNWIFVG CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHH LYVISRWKDTALQWLMSRSFWSVLEATADGLASPVPVANAALMVPVELTSVAPSTVAINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCHHHHHHH FFYMLLPLIWLVMAALIYGYDVRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGY HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLWLGATRLIGPHELDVWQILSH HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GVTLLFGSPFQDSSTGILIEPIRICFLAAVLEIAFSLSKGR CCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPMTSRHCTEEVRGRFPARLQNDRALLERPGAGGIVRDLMFADIIRPTSLSFSLLRRFW CCCCCHHHHHHHHCCCCCHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH PQLVALVLAGVLAGDLLLQLAAKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LLAAQRGADKAAEEQETADRRGSRLVRMVTIALLPFFAYYAAWGFLGDIVRQYSRATLDQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFGQSADVLDVLDSRWLLISVAVSWLIRRVAKFMQTKTKTASFWQIVVVICETNWIFVG CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHH LYVISRWKDTALQWLMSRSFWSVLEATADGLASPVPVANAALMVPVELTSVAPSTVAINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCHHHHHHH FFYMLLPLIWLVMAALIYGYDVRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGY HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLWLGATRLIGPHELDVWQILSH HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC GVTLLFGSPFQDSSTGILIEPIRICFLAAVLEIAFSLSKGR CCEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA