| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471966
Identifier: 13471966
GI number: 13471966
Start: 1723136
End: 1723702
Strand: Reverse
Name: 13471966
Synonym: mll2106
Alternate gene names: NA
Gene position: 1723702-1723136 (Counterclockwise)
Preceding gene: 13471967
Following gene: 13471964
Centisome position: 24.5
GC content: 60.14
Gene sequence:
>567_bases ATGATCGACTGCGACGCGCGGGTGGCGCGTTCAATCCGGTTTTTGTCCTGCGGCAGTCGGGCCAAGGGGTTCTCCTTCAA TGGCAGCCAAAATGCGCGCCGCGAGGAAATGTTCCGCCGCGAGGGGTGCGAGGGCGAAAATCTCGGAACCGAGAATCGAC ACGGAAGTTGTGGCAAACCTCCAACTTTCGAAAGCATCTTCATGGAAAAGACGTTCAACCGCATGGCCGGCGCGGTCGCT CATGCCACCGGCAGGCCATGGGCCTTCGCCCTGTGCACGGCATCGGTGTTGATCTGGGCGGCAACCGGCCCGGTCTTCCA CTATTCCGAAACCTGGCAGCTGGTCATCAACACCGGGACCACCATCATCACCTTCCTGATGGTCTTTCTCATCCAGAACA CGCAGAACAGGGACGGCGCGGCGATCCAGGTCAAGCTCGACGAACTGATCCGGTCCGGTCTCGGCAAGAATGACTTTATC GGCATAGAGCACCTCACCGAAAGGGAGGTGGAGGCGTTTCGCCGCGCCTGCGAGGCGGCCAAAACCGCCAAGGCAAGTAA AGGCTAG
Upstream 100 bases:
>100_bases CTTGGGCGGGGCGGGCGCGGCCGACGACGGGGCGTCCGAAGAGAGCCGCAGTGCCCGCAGCCGCGCCGTCTTGTCCTCAC GCGCCTGACGCTCTCCGGCA
Downstream 100 bases:
>100_bases GCGTCTGGCTGGGTCGTCTCGTGTGCCGGGGCGGTCGAGGCGCGGTTTTCTACGTTTTTCAGCTCGGCATCGATGGCTTT GGGCGAGGCGTGTTCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MIDCDARVARSIRFLSCGSRAKGFSFNGSQNARREEMFRREGCEGENLGTENRHGSCGKPPTFESIFMEKTFNRMAGAVA HATGRPWAFALCTASVLIWAATGPVFHYSETWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQVKLDELIRSGLGKNDFI GIEHLTEREVEAFRRACEAAKTAKASKG
Sequences:
>Translated_188_residues MIDCDARVARSIRFLSCGSRAKGFSFNGSQNARREEMFRREGCEGENLGTENRHGSCGKPPTFESIFMEKTFNRMAGAVA HATGRPWAFALCTASVLIWAATGPVFHYSETWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQVKLDELIRSGLGKNDFI GIEHLTEREVEAFRRACEAAKTAKASKG >Mature_188_residues MIDCDARVARSIRFLSCGSRAKGFSFNGSQNARREEMFRREGCEGENLGTENRHGSCGKPPTFESIFMEKTFNRMAGAVA HATGRPWAFALCTASVLIWAATGPVFHYSETWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQVKLDELIRSGLGKNDFI GIEHLTEREVEAFRRACEAAKTAKASKG
Specific function: Unknown
COG id: COG5478
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20801; Mature: 20801
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDCDARVARSIRFLSCGSRAKGFSFNGSQNARREEMFRREGCEGENLGTENRHGSCGKP CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PTFESIFMEKTFNRMAGAVAHATGRPWAFALCTASVLIWAATGPVFHYSETWQLVINTGT CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCH TIITFLMVFLIQNTQNRDGAAIQVKLDELIRSGLGKNDFIGIEHLTEREVEAFRRACEAA HHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH KTAKASKG HHHCCCCC >Mature Secondary Structure MIDCDARVARSIRFLSCGSRAKGFSFNGSQNARREEMFRREGCEGENLGTENRHGSCGKP CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PTFESIFMEKTFNRMAGAVAHATGRPWAFALCTASVLIWAATGPVFHYSETWQLVINTGT CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCH TIITFLMVFLIQNTQNRDGAAIQVKLDELIRSGLGKNDFIGIEHLTEREVEAFRRACEAA HHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH KTAKASKG HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA