Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471940
Identifier: 13471940
GI number: 13471940
Start: 1693808
End: 1694452
Strand: Reverse
Name: 13471940
Synonym: mll2072
Alternate gene names: NA
Gene position: 1694452-1693808 (Counterclockwise)
Preceding gene: 13471941
Following gene: 13471939
Centisome position: 24.08
GC content: 63.88
Gene sequence:
>645_bases ATGACCAGCTTCCTCTTCGACGGCTTCGACACCGCTCCCGTCACCATCCTGCTCGCCCACGGCGCCGGCGCATCGATGGA TTCTCCCTCGATGACCGCAACCGCCAAGGCTTTGGCCACGGCCGGTGTCCAGGTCGCGCGCTTCGAATTCCACTATATGG CGGCGCGCCGTTACGGCCACCGCAAGCCGCCGCCGCGCGCCGAGACGGTCAATCCGGAATATATCAAGGCGATCGCTGAC CTCAGGGCCAGGGGCGTGACCGGGAAGCTGATCATCGGCGGCAAGTCGATGGGTGGGCGTGTCGCTTCCATGGTTGCGGA CGAGATGTTCGCCAAGGGGGAGATTTCAGGGCTGGTCTGTCTCGGCTATCCCTTCCATCCGCCTGGAAAGCCCGACCAGC TGCGCACCAAACATTTGACCGGGCTGAAGACGCCGACGCTGATCTTTCAAGGCACGCGAGACGAGTTCGGCACGCGCGAC GAAGTGGCGGGGTATGGGCTGTCGGACCAGATCGAGGTGATCTGGCTGGAGGATGGCGACCACGATCTCAAGCCGCGCAA GGGCATTTCGGGATTCTCCACCGCCGATCATCTGAAGACGCTGGCGGAGACGGTGAAGGCTTGGGCAGGCCGGATCGCCT CCTGA
Upstream 100 bases:
>100_bases TGACTGAAGGCCGGCATTCCTTGGCGCCCCCCTCTGCCCTGCCGGGCATCTCCCCCACGAGGGGGGAGATTGGCAGCGTC ACTGCCGCGCGAGACGTCCC
Downstream 100 bases:
>100_bases TCCAACCATGAAACTCGCCACCTTCAACATCAACAACATCAACAGCCGGCTGGAAAACCTGCTGGCCTGGCTGGCGGCGG CAAAGCCCGATGTCGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTSFLFDGFDTAPVTILLAHGAGASMDSPSMTATAKALATAGVQVARFEFHYMAARRYGHRKPPPRAETVNPEYIKAIAD LRARGVTGKLIIGGKSMGGRVASMVADEMFAKGEISGLVCLGYPFHPPGKPDQLRTKHLTGLKTPTLIFQGTRDEFGTRD EVAGYGLSDQIEVIWLEDGDHDLKPRKGISGFSTADHLKTLAETVKAWAGRIAS
Sequences:
>Translated_214_residues MTSFLFDGFDTAPVTILLAHGAGASMDSPSMTATAKALATAGVQVARFEFHYMAARRYGHRKPPPRAETVNPEYIKAIAD LRARGVTGKLIIGGKSMGGRVASMVADEMFAKGEISGLVCLGYPFHPPGKPDQLRTKHLTGLKTPTLIFQGTRDEFGTRD EVAGYGLSDQIEVIWLEDGDHDLKPRKGISGFSTADHLKTLAETVKAWAGRIAS >Mature_213_residues TSFLFDGFDTAPVTILLAHGAGASMDSPSMTATAKALATAGVQVARFEFHYMAARRYGHRKPPPRAETVNPEYIKAIADL RARGVTGKLIIGGKSMGGRVASMVADEMFAKGEISGLVCLGYPFHPPGKPDQLRTKHLTGLKTPTLIFQGTRDEFGTRDE VAGYGLSDQIEVIWLEDGDHDLKPRKGISGFSTADHLKTLAETVKAWAGRIAS
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI208610009, Length=202, Percent_Identity=27.7227722772277, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23018; Mature: 22886
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFLFDGFDTAPVTILLAHGAGASMDSPSMTATAKALATAGVQVARFEFHYMAARRYGH CCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC RKPPPRAETVNPEYIKAIADLRARGVTGKLIIGGKSMGGRVASMVADEMFAKGEISGLVC CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE LGYPFHPPGKPDQLRTKHLTGLKTPTLIFQGTRDEFGTRDEVAGYGLSDQIEVIWLEDGD ECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHCCCCCCCCEEEEEEECCC HDLKPRKGISGFSTADHLKTLAETVKAWAGRIAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSFLFDGFDTAPVTILLAHGAGASMDSPSMTATAKALATAGVQVARFEFHYMAARRYGH CCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC RKPPPRAETVNPEYIKAIADLRARGVTGKLIIGGKSMGGRVASMVADEMFAKGEISGLVC CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE LGYPFHPPGKPDQLRTKHLTGLKTPTLIFQGTRDEFGTRDEVAGYGLSDQIEVIWLEDGD ECCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCHHCCCCHHHCCCCCCCCEEEEEEECCC HDLKPRKGISGFSTADHLKTLAETVKAWAGRIAS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA