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The map label for this gene is omp31 [H]

Identifier: 13471933

GI number: 13471933

Start: 1687070

End: 1687732

Strand: Reverse

Name: omp31 [H]

Synonym: mll2060

Alternate gene names: 13471933

Gene position: 1687732-1687070 (Counterclockwise)

Preceding gene: 13471934

Following gene: 13471929

Centisome position: 23.99

GC content: 57.62

Gene sequence:

>663_bases
ATGAAGCTCGCACTGCTGTGTTCCGTTGCATTTCTTGCAGCCGCGTCTCCGGTTCTGGCGGCGGATATCGTCGAACCTGT
CGCCGCCATGCCTTTTTCCTGGACCGGGTTTTATGGCGGTGTCCAGGCGGGCGGTGGCTGGAACGACAGTCGCTGGTCGG
GCGCCACGTTCGACAGTTTCAACACAAACGGGTCTGGCGGCATTTTCGGCGGCCAGATCGGCTACAACTACCAGATCAAC
CAATTCGTCATCGGCATTGAGGGCGACCTTGCGGGCTCGACCGTGAAGGGCGACGGTCAATGCTCTACTGCCCTGGGCAC
AACTTGCGAGACCAAGCAGGATTATCTGGGCTCGGTGCGTGGCCGCCTGGGATATGCGATCGACCGGATCCTGATTTATG
GCGATGCCGGTGTCGCCTTCACCAAGTATAAAATCGCTGAGGTCGACGGTTTTCACCAGTCATTTGGCGGGGGATCCCGG
GTCGGCTGGACGGCAGGCCTGGGCGCCGAATATGCATTGACCGACCATTGGACCGCCGGCGTCGAATGGAATTATTATGA
TTTTGGCACGAAAAGCGGCGAAAGCGACACAATTCCGGGCTTCTTCGTCGACAATCGCAACACGGAAAATGTCGTGGTCG
GCAAGATCAACTACAAATTCTGA

Upstream 100 bases:

>100_bases
ACGCTCGCCTGAAACTTTCCGTTCTTTCAGTTACAGCCGGCGATCGGTCTTGTGGTATCGATGTGACGCGGGGGGAAGGG
CGACTGATGCGGAGATATCG

Downstream 100 bases:

>100_bases
GGCGACAGGCCGGTTCTCGGCGGCGGCCGCCGCAATCTTTGATGATGCATGACGGCCGCGCAGGGCCTTATCAATCGACC
GCCCTGTGATCGGCCGCCTG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKLALLCSVAFLAAASPVLAADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQIN
QFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVRGRLGYAIDRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSR
VGWTAGLGAEYALTDHWTAGVEWNYYDFGTKSGESDTIPGFFVDNRNTENVVVGKINYKF

Sequences:

>Translated_220_residues
MKLALLCSVAFLAAASPVLAADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQIN
QFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVRGRLGYAIDRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSR
VGWTAGLGAEYALTDHWTAGVEWNYYDFGTKSGESDTIPGFFVDNRNTENVVVGKINYKF
>Mature_220_residues
MKLALLCSVAFLAAASPVLAADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSFNTNGSGGIFGGQIGYNYQIN
QFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVRGRLGYAIDRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSR
VGWTAGLGAEYALTDHWTAGVEWNYYDFGTKSGESDTIPGFFVDNRNTENVVVGKINYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 23339; Mature: 23339

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALLCSVAFLAAASPVLAADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTNGSGGIFGGQIGYNYQINQFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVR
CCCCCCCEECCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCHHCCCCCCCHHHHHHHHH
GRLGYAIDRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSRVGWTAGLGAEYALTDHWTAG
HHHHHEEEEEEEEECCCCEEEEEEEEECCCHHHHCCCCCCCCEEECCCCCEEECCCEECC
VEWNYYDFGTKSGESDTIPGFFVDNRNTENVVVGKINYKF
CEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKLALLCSVAFLAAASPVLAADIVEPVAAMPFSWTGFYGGVQAGGGWNDSRWSGATFDSF
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTNGSGGIFGGQIGYNYQINQFVIGIEGDLAGSTVKGDGQCSTALGTTCETKQDYLGSVR
CCCCCCCEECCCCCCCEEEEEEEEEECCCCCCCEECCCCCCCHHCCCCCCCHHHHHHHHH
GRLGYAIDRILIYGDAGVAFTKYKIAEVDGFHQSFGGGSRVGWTAGLGAEYALTDHWTAG
HHHHHEEEEEEEEECCCCEEEEEEEEECCCHHHHCCCCCCCCEEECCCCCEEECCCEECC
VEWNYYDFGTKSGESDTIPGFFVDNRNTENVVVGKINYKF
CEEEEEECCCCCCCCCCCCEEEECCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]