Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471853
Identifier: 13471853
GI number: 13471853
Start: 1611950
End: 1612564
Strand: Reverse
Name: 13471853
Synonym: mll1959
Alternate gene names: NA
Gene position: 1612564-1611950 (Counterclockwise)
Preceding gene: 13471854
Following gene: 13471852
Centisome position: 22.92
GC content: 68.46
Gene sequence:
>615_bases GTGATGAAAGCGGTTCTGGCACTGGTCGCAGGCTTCGTCCTCACCCTTGCGGTCTTTGCCAGCGGGCTGGCTTTCGCCGC CTGGCTGATACTGGCCAAGCCGGTGCATCAGTCCAGGCCCGCCGACAGTGTCTCGCAGCTGTGGACCAAGGACGCACAGC CCGTGGACAAGGCCGCGCCGGGCCTGGAGCGCGTGGCCGCCGCGCAGGCCCCGGCACCCGACGCCGCCGCCAGGGTGCAG TCCGTCGACCCGACCAAGACAGGCGCGGTGGCGCCCGATGCGGACGAGCAGCAGGCCAGGCTGCCGGCTGCTCATGTCAG CTGGTGCGCGGACCGCTACCGCTCCTACAATCCAGACGACAACAGCTACATGTCCTACAGCGGACAGCAGCGCCCCTGCG TCTCGCCCTATCTCGAAACCAGTGCCGACGCCGGCCAGGCCGCGCAGCAGCCCGACGTAGTCAGCTATGTCGAGGGCGGC GCGGCGCCGCTGGTTGCGACAGCGGACCTTTCGGACGACCACGTCCAATCCTGCTTCAGCCGCTACCGCTCCTACCGTCC CGAGGACAACAGCTACCAGCCATACTCCGGTGGACCGAGGCGCCAGTGCGAATAG
Upstream 100 bases:
>100_bases GCGCATCCGCATGCCGCTCCAGTGCTGACCGTGCAATACGCTCGCTCGCCGGAACCAGTCCCGGTGCTCCGCATTCTATT AGCGGGGACGCAAGGAGTGT
Downstream 100 bases:
>100_bases GCGCCGCGCGCCGCTTGCCAATGGAGGATTGGCGAAATGCGAGGTTACAGCCAATCTCCCCCTTGTGAGGGTTGAGAAGT GGTCCGCGTAGCGGACGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MMKAVLALVAGFVLTLAVFASGLAFAAWLILAKPVHQSRPADSVSQLWTKDAQPVDKAAPGLERVAAAQAPAPDAAARVQ SVDPTKTGAVAPDADEQQARLPAAHVSWCADRYRSYNPDDNSYMSYSGQQRPCVSPYLETSADAGQAAQQPDVVSYVEGG AAPLVATADLSDDHVQSCFSRYRSYRPEDNSYQPYSGGPRRQCE
Sequences:
>Translated_204_residues MMKAVLALVAGFVLTLAVFASGLAFAAWLILAKPVHQSRPADSVSQLWTKDAQPVDKAAPGLERVAAAQAPAPDAAARVQ SVDPTKTGAVAPDADEQQARLPAAHVSWCADRYRSYNPDDNSYMSYSGQQRPCVSPYLETSADAGQAAQQPDVVSYVEGG AAPLVATADLSDDHVQSCFSRYRSYRPEDNSYQPYSGGPRRQCE >Mature_204_residues MMKAVLALVAGFVLTLAVFASGLAFAAWLILAKPVHQSRPADSVSQLWTKDAQPVDKAAPGLERVAAAQAPAPDAAARVQ SVDPTKTGAVAPDADEQQARLPAAHVSWCADRYRSYNPDDNSYMSYSGQQRPCVSPYLETSADAGQAAQQPDVVSYVEGG AAPLVATADLSDDHVQSCFSRYRSYRPEDNSYQPYSGGPRRQCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21820; Mature: 21820
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKAVLALVAGFVLTLAVFASGLAFAAWLILAKPVHQSRPADSVSQLWTKDAQPVDKAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCC GLERVAAAQAPAPDAAARVQSVDPTKTGAVAPDADEQQARLPAAHVSWCADRYRSYNPDD HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCC NSYMSYSGQQRPCVSPYLETSADAGQAAQQPDVVSYVEGGAAPLVATADLSDDHVQSCFS CCEECCCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHH RYRSYRPEDNSYQPYSGGPRRQCE HHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKAVLALVAGFVLTLAVFASGLAFAAWLILAKPVHQSRPADSVSQLWTKDAQPVDKAAP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCC GLERVAAAQAPAPDAAARVQSVDPTKTGAVAPDADEQQARLPAAHVSWCADRYRSYNPDD HHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCC NSYMSYSGQQRPCVSPYLETSADAGQAAQQPDVVSYVEGGAAPLVATADLSDDHVQSCFS CCEECCCCCCCCCCCHHHHCCCCCCCHHCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHH RYRSYRPEDNSYQPYSGGPRRQCE HHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA