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The map label for this gene is 13471832

Identifier: 13471832

GI number: 13471832

Start: 1589459

End: 1590880

Strand: Reverse

Name: 13471832

Synonym: mll1933

Alternate gene names: NA

Gene position: 1590880-1589459 (Counterclockwise)

Preceding gene: 13471833

Following gene: 13471831

Centisome position: 22.61

GC content: 68.21

Gene sequence:

>1422_bases
GTGTCCTTCGCGCGGGTGGCCCTTCTTGCCGCGGCTTTTGTCGCCGTGGCTGCATTTTCTCCCCTCTCTTCGGCTGGGAG
CGAGAAGGTTGCGCTGAGCGTCGCCATTGACGGCGCAATCGGGCCGGCGAGCACCAGGCAACTCGAGGAAGCGCTCGATG
TCGCCGCCAAGCGGGACGCCACGGTCCTCATCCTGCAACTCGATACGCCCGGCGGGCTGGTCACCTCGATGCGCGAGATG
ATCGCCGACATCCTGGCTTCGCCAGTGCCCGTCATCGGCTATGTCGCGCCGGCCGGCGGCCATGCGGCGAGCGCCGGCAC
CTATATCCTCTACGCTACCCATGTCGCGGCGATGGCGCCCGGCACCAATCTCGGCGCCGCGACGCCGGTCGAGATCGGCG
GGCTGCCGTCGCTCCCGGGCGGCGACAAGGGTGATCAGAAGACTCAGGGCGAGCAGAAGACTCAGGGCGACCAGAAGAAC
CAGGGCGACCAGAAGGGTGAGGACGGTCGGCCGGCGGGCGACGCGATGATGGCCAAGGTGACCAATGACGCGGTCGCCCT
GATCCGCTCGCTCGCCGAACTGCGCGGGCGCAATGGTGACTGGGGCGAGAAGGCGGTGCGCGAGGCGGCAAGCCTGTCGG
CCAATGCGGCGCTGCAGGAGCATGTCATCGACTTCGTCGCCCACGACACCACCGAGCTGTTGCAACTGGCCGACGGGCGC
ACCGTCGACGTGGCCGGCAAAAAAGTGGTGCTGGCGACCAAGGGGCTGCCGGTCGAGACGCTGGAGCCCGGCTGGTTCAT
CCGGCTGCTTGCCGTCATCACCGATCCGAACATCGCGGTCATCCTGATGCTGGTCGGCGTCTATGGCATCGTCTTCGAGT
TCACCAGTCCCGGCGCGGTCGCGCCCGGCGTCATCGGCACCATCTGCCTCGTGCTCGGCCTCTACGCGCTCGACCTCCTG
CCGATCAACTATACCGGCCTTGCGCTGATGCTGCTCGGCATCGCCTTCCTCGTCATCGAGGCCCTCAATCCCACCGTCGT
GCTCGGCGTAAGCGGCGTGGCCGCCTTTCTGTTCGGCGCCGCCATGCTGCTGCGGGTAGAGGGGCCGGGCTTTGCCATGT
CATGGGCCGTCATCGGTCCCGCCGCCGCGCTGACGCTTGGGCTGGCGCTGCTGACCGGCACCTATGTCTGGGCGGCACGC
AAGAACCCGCCGCGCGTCGGTGGCGACGCGATGCGCGGCCTGCCGGTCGAGATCCTCGACTGGCAAGGCGGCGAGGGTCA
TGTGCTGGCCCTGGGCGAGCGCTGGCGGGCAAAGGCAGCCGAACCGATCGTGGCCGGCGACAGCGTCGAGGTGACTGACA
TCAGCGACCTCGTGCTCACCGTGCGGCGGCGCGATCCGGGAAGGAATGGAGCAAGGCAATGA

Upstream 100 bases:

>100_bases
GCGGCGCGTTCCATGACAATTCCAGTGCCAGCCGACGGCATCAACTCCCCATTGGACTTCGCTGGGACACCACCCATATT
GAGTCCATGGAGCGTTGAGC

Downstream 100 bases:

>100_bases
TGGTTGGTTATGTGGCCTATCTGGTCGTTGCGCTGGTCGTGATCATGTTCTTGTCCGCGGCCGTCCGTATCCTCCGGGAA
TATCAGCGCGGCGTGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-Bound Serine Protease; Nodulation Protein NfeD; NfeD Protein; Nodulation Efficiency Protein D; Nodulation Competitiveness Protein NfeD; Membrane Bound Peptidase; Transmembrane Protein; NfeD Family Protein; Serine Protease; Membrane-Bound Serine Protease-Like Protein; Nodulation Efficiency Family Protein; Membrane-Bound Serine Protease ClpP Class; NfeD Nodulation Like Protein Membrane Protein; Nodulation Efficiency Protein Nfed; Nodulation Protein; Membrane-Bound Protease; NfeD-Like Family; Protease/Transporter; Membrane-Bound ClpP-Class Protease; S49 Family Serine Protease; Short-Chain Alcohol Dehydrogenase; Membrane-Bound Serine Protease NfeD-Like Protein; NfeD-Like Membrane-Bound Serine Protease; Nfed Family Protein; Nodulation Protein Nfed; Membrane-Bound Serine Protease Protein

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSFARVALLAAAFVAVAAFSPLSSAGSEKVALSVAIDGAIGPASTRQLEEALDVAAKRDATVLILQLDTPGGLVTSMREM
IADILASPVPVIGYVAPAGGHAASAGTYILYATHVAAMAPGTNLGAATPVEIGGLPSLPGGDKGDQKTQGEQKTQGDQKN
QGDQKGEDGRPAGDAMMAKVTNDAVALIRSLAELRGRNGDWGEKAVREAASLSANAALQEHVIDFVAHDTTELLQLADGR
TVDVAGKKVVLATKGLPVETLEPGWFIRLLAVITDPNIAVILMLVGVYGIVFEFTSPGAVAPGVIGTICLVLGLYALDLL
PINYTGLALMLLGIAFLVIEALNPTVVLGVSGVAAFLFGAAMLLRVEGPGFAMSWAVIGPAAALTLGLALLTGTYVWAAR
KNPPRVGGDAMRGLPVEILDWQGGEGHVLALGERWRAKAAEPIVAGDSVEVTDISDLVLTVRRRDPGRNGARQ

Sequences:

>Translated_473_residues
MSFARVALLAAAFVAVAAFSPLSSAGSEKVALSVAIDGAIGPASTRQLEEALDVAAKRDATVLILQLDTPGGLVTSMREM
IADILASPVPVIGYVAPAGGHAASAGTYILYATHVAAMAPGTNLGAATPVEIGGLPSLPGGDKGDQKTQGEQKTQGDQKN
QGDQKGEDGRPAGDAMMAKVTNDAVALIRSLAELRGRNGDWGEKAVREAASLSANAALQEHVIDFVAHDTTELLQLADGR
TVDVAGKKVVLATKGLPVETLEPGWFIRLLAVITDPNIAVILMLVGVYGIVFEFTSPGAVAPGVIGTICLVLGLYALDLL
PINYTGLALMLLGIAFLVIEALNPTVVLGVSGVAAFLFGAAMLLRVEGPGFAMSWAVIGPAAALTLGLALLTGTYVWAAR
KNPPRVGGDAMRGLPVEILDWQGGEGHVLALGERWRAKAAEPIVAGDSVEVTDISDLVLTVRRRDPGRNGARQ
>Mature_472_residues
SFARVALLAAAFVAVAAFSPLSSAGSEKVALSVAIDGAIGPASTRQLEEALDVAAKRDATVLILQLDTPGGLVTSMREMI
ADILASPVPVIGYVAPAGGHAASAGTYILYATHVAAMAPGTNLGAATPVEIGGLPSLPGGDKGDQKTQGEQKTQGDQKNQ
GDQKGEDGRPAGDAMMAKVTNDAVALIRSLAELRGRNGDWGEKAVREAASLSANAALQEHVIDFVAHDTTELLQLADGRT
VDVAGKKVVLATKGLPVETLEPGWFIRLLAVITDPNIAVILMLVGVYGIVFEFTSPGAVAPGVIGTICLVLGLYALDLLP
INYTGLALMLLGIAFLVIEALNPTVVLGVSGVAAFLFGAAMLLRVEGPGFAMSWAVIGPAAALTLGLALLTGTYVWAARK
NPPRVGGDAMRGLPVEILDWQGGEGHVLALGERWRAKAAEPIVAGDSVEVTDISDLVLTVRRRDPGRNGARQ

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48747; Mature: 48616

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFARVALLAAAFVAVAAFSPLSSAGSEKVALSVAIDGAIGPASTRQLEEALDVAAKRDA
CCHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
TVLILQLDTPGGLVTSMREMIADILASPVPVIGYVAPAGGHAASAGTYILYATHVAAMAP
EEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHCC
GTNLGAATPVEIGGLPSLPGGDKGDQKTQGEQKTQGDQKNQGDQKGEDGRPAGDAMMAKV
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
TNDAVALIRSLAELRGRNGDWGEKAVREAASLSANAALQEHVIDFVAHDTTELLQLADGR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
TVDVAGKKVVLATKGLPVETLEPGWFIRLLAVITDPNIAVILMLVGVYGIVFEFTSPGAV
EEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCC
APGVIGTICLVLGLYALDLLPINYTGLALMLLGIAFLVIEALNPTVVLGVSGVAAFLFGA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AMLLRVEGPGFAMSWAVIGPAAALTLGLALLTGTYVWAARKNPPRVGGDAMRGLPVEILD
HEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHCCCCEEEEE
WQGGEGHVLALGERWRAKAAEPIVAGDSVEVTDISDLVLTVRRRDPGRNGARQ
CCCCCCCEEEECCHHHHHCCCCEECCCCEEEEEHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SFARVALLAAAFVAVAAFSPLSSAGSEKVALSVAIDGAIGPASTRQLEEALDVAAKRDA
CHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
TVLILQLDTPGGLVTSMREMIADILASPVPVIGYVAPAGGHAASAGTYILYATHVAAMAP
EEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHCC
GTNLGAATPVEIGGLPSLPGGDKGDQKTQGEQKTQGDQKNQGDQKGEDGRPAGDAMMAKV
CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
TNDAVALIRSLAELRGRNGDWGEKAVREAASLSANAALQEHVIDFVAHDTTELLQLADGR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
TVDVAGKKVVLATKGLPVETLEPGWFIRLLAVITDPNIAVILMLVGVYGIVFEFTSPGAV
EEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCC
APGVIGTICLVLGLYALDLLPINYTGLALMLLGIAFLVIEALNPTVVLGVSGVAAFLFGA
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AMLLRVEGPGFAMSWAVIGPAAALTLGLALLTGTYVWAARKNPPRVGGDAMRGLPVEILD
HEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHCCCCEEEEE
WQGGEGHVLALGERWRAKAAEPIVAGDSVEVTDISDLVLTVRRRDPGRNGARQ
CCCCCCCEEEECCHHHHHCCCCEECCCCEEEEEHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA