| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471830
Identifier: 13471830
GI number: 13471830
Start: 1587478
End: 1588602
Strand: Reverse
Name: 13471830
Synonym: mll1931
Alternate gene names: NA
Gene position: 1588602-1587478 (Counterclockwise)
Preceding gene: 13471831
Following gene: 13471828
Centisome position: 22.58
GC content: 59.02
Gene sequence:
>1125_bases ATGATGAGACTACCGATCATGGCGGGCCTTGTTCTGGCAGGTTCTCCGGCGTGGGCAGGCGACATACCGTATGCGCCGTC GGCCAATGTCCCCGACTATGTCGCGACGATGACGGTGCAACCATCGGGAAATTCGGCCGGATCCCATACGAGGATCGTCA CACATCATGACGGCTGGGTCCGTGTGGACGAACTGGGGGCGGTCATCTACGGAAATCCGGCAAAGCAAATAACGGTCTCA TTCCTTCGGGATCCAAACTATTCCTCTGTTTCGGTAAACCGTGAGACGTCGACATCCTACGAACGAATTCGCGCAGTAAC GGAAACCGGCCAGACCGAGACGCATGCCGGCGAGCGATGCGACGTGCGGGACGTTGTGCGGCGCGATCCAGACAAGCCGG CCCCTGGACTTCAATGGCTGAGTTGCCTGACGGCTGATGGTATCCAGATCGCCACGAGGGTGTTTGTGAACGGCTCGCTG TTTCAATCGACGGCGATTGTCAGACTCGAACGGCGCCCGGTGTCCGCCGAGGAGGTCGAGCTGCCTGCCAATTTGCTGGA CGTTGCCCAATGGCTGCACTTCGACCATCCGCCACCCCAAGCTGCAACCGCTGTCAAGCGCCCACCGGATTTTGCCATGC ACATGCAATGGCAAGGTGCGGTCAGGGCATTGCGGCGGCACGATCCGTGGACCTACGATGAAATATCGTATCCCGATGGA CGGCGAATCCTAGATATCCGCAACGACCAAACGGGGCAGGCACTATCCTTCAGGGCCGCCAAGGGCGGCGCGTTTGAGCG GCTCTCCATATGCGAGAAATGTCAGTCGGCAGATTCGCCGGCTATTCACCTCGGCCGCAATGTCATCCCGGAGAGCATGG GCCGCACGGACAGTGTTCTCGGCGAGGCGTGCGACTGGTTCGACATGGCTCCGGGTACGTTTGACATAAACCTTTCGCAA TGTCTGACGCCGGATAAAATCCCGCTAAAAATCGGCAGTGGTGGAGCGTGGGGACCCCGTGAGGAATTTGTCGCCGATGA GGTTCAGCGCCGAGAGCTCAAGCCCGAAGAGATTCTTCCACCCAGCGATGTCCTGAACCGGTCGAACTGGGATTTTCCAG GATAG
Upstream 100 bases:
>100_bases AGTAAAAACCAGCGGAGCCCAGTCGCACAGCCGTCGCAAAATCGCCGCTCTTGCAGGGAATCGTACGGTCGGAGCTGCGT GGCACGCGGGGGGAGAAGCC
Downstream 100 bases:
>100_bases GTGGGGAGTTTGGCGAAAACCGGATGACGGCACTTCATTGCCGCCAGGGCGGCTCCGGCGCGAAGCGCTTGCTGATCCAG TCGGCGAAGGCGCGGGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MMRLPIMAGLVLAGSPAWAGDIPYAPSANVPDYVATMTVQPSGNSAGSHTRIVTHHDGWVRVDELGAVIYGNPAKQITVS FLRDPNYSSVSVNRETSTSYERIRAVTETGQTETHAGERCDVRDVVRRDPDKPAPGLQWLSCLTADGIQIATRVFVNGSL FQSTAIVRLERRPVSAEEVELPANLLDVAQWLHFDHPPPQAATAVKRPPDFAMHMQWQGAVRALRRHDPWTYDEISYPDG RRILDIRNDQTGQALSFRAAKGGAFERLSICEKCQSADSPAIHLGRNVIPESMGRTDSVLGEACDWFDMAPGTFDINLSQ CLTPDKIPLKIGSGGAWGPREEFVADEVQRRELKPEEILPPSDVLNRSNWDFPG
Sequences:
>Translated_374_residues MMRLPIMAGLVLAGSPAWAGDIPYAPSANVPDYVATMTVQPSGNSAGSHTRIVTHHDGWVRVDELGAVIYGNPAKQITVS FLRDPNYSSVSVNRETSTSYERIRAVTETGQTETHAGERCDVRDVVRRDPDKPAPGLQWLSCLTADGIQIATRVFVNGSL FQSTAIVRLERRPVSAEEVELPANLLDVAQWLHFDHPPPQAATAVKRPPDFAMHMQWQGAVRALRRHDPWTYDEISYPDG RRILDIRNDQTGQALSFRAAKGGAFERLSICEKCQSADSPAIHLGRNVIPESMGRTDSVLGEACDWFDMAPGTFDINLSQ CLTPDKIPLKIGSGGAWGPREEFVADEVQRRELKPEEILPPSDVLNRSNWDFPG >Mature_374_residues MMRLPIMAGLVLAGSPAWAGDIPYAPSANVPDYVATMTVQPSGNSAGSHTRIVTHHDGWVRVDELGAVIYGNPAKQITVS FLRDPNYSSVSVNRETSTSYERIRAVTETGQTETHAGERCDVRDVVRRDPDKPAPGLQWLSCLTADGIQIATRVFVNGSL FQSTAIVRLERRPVSAEEVELPANLLDVAQWLHFDHPPPQAATAVKRPPDFAMHMQWQGAVRALRRHDPWTYDEISYPDG RRILDIRNDQTGQALSFRAAKGGAFERLSICEKCQSADSPAIHLGRNVIPESMGRTDSVLGEACDWFDMAPGTFDINLSQ CLTPDKIPLKIGSGGAWGPREEFVADEVQRRELKPEEILPPSDVLNRSNWDFPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41275; Mature: 41275
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLPIMAGLVLAGSPAWAGDIPYAPSANVPDYVATMTVQPSGNSAGSHTRIVTHHDGWV CCCCCHHHCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEE RVDELGAVIYGNPAKQITVSFLRDPNYSSVSVNRETSTSYERIRAVTETGQTETHAGERC EHHHCCEEEECCCHHHEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC DVRDVVRRDPDKPAPGLQWLSCLTADGIQIATRVFVNGSLFQSTAIVRLERRPVSAEEVE CHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHCEEEEEEECCCCCHHHHC LPANLLDVAQWLHFDHPPPQAATAVKRPPDFAMHMQWQGAVRALRRHDPWTYDEISYPDG CCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCC RRILDIRNDQTGQALSFRAAKGGAFERLSICEKCQSADSPAIHLGRNVIPESMGRTDSVL CEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCHHCHHHCCCHHHHH GEACDWFDMAPGTFDINLSQCLTPDKIPLKIGSGGAWGPREEFVADEVQRRELKPEEILP HHHHCHHHCCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHCCC PSDVLNRSNWDFPG CHHHHCCCCCCCCC >Mature Secondary Structure MMRLPIMAGLVLAGSPAWAGDIPYAPSANVPDYVATMTVQPSGNSAGSHTRIVTHHDGWV CCCCCHHHCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEE RVDELGAVIYGNPAKQITVSFLRDPNYSSVSVNRETSTSYERIRAVTETGQTETHAGERC EHHHCCEEEECCCHHHEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC DVRDVVRRDPDKPAPGLQWLSCLTADGIQIATRVFVNGSLFQSTAIVRLERRPVSAEEVE CHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHCEEEEEEECCCCCHHHHC LPANLLDVAQWLHFDHPPPQAATAVKRPPDFAMHMQWQGAVRALRRHDPWTYDEISYPDG CCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCC RRILDIRNDQTGQALSFRAAKGGAFERLSICEKCQSADSPAIHLGRNVIPESMGRTDSVL CEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHCCHHCHHHCCCHHHHH GEACDWFDMAPGTFDINLSQCLTPDKIPLKIGSGGAWGPREEFVADEVQRRELKPEEILP HHHHCHHHCCCCEEEEEHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHCCC PSDVLNRSNWDFPG CHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA