| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471786
Identifier: 13471786
GI number: 13471786
Start: 1542610
End: 1543323
Strand: Reverse
Name: 13471786
Synonym: mll1876
Alternate gene names: NA
Gene position: 1543323-1542610 (Counterclockwise)
Preceding gene: 13471789
Following gene: 13471784
Centisome position: 21.93
GC content: 58.54
Gene sequence:
>714_bases ATGACCGACCACATCATCGCGCCTTACTCGGACTGGTTTGAAGCGCATAAATCGCATCTCGTAAAAGAGAAGGCGTTGAC GCGCCAGCGTCAACAACTCGCGGCGGAGCGGCGCGCGCTGCCGTGGCTGCGCATCGACAAGCCCTACGCGTTCGATACGA CCCAGGGAAGGAAATCGCTAGCCGATCTTTTCGAGGGCCGCAGCCAGTTGATCATCTATCACTTCATGTTTCCGCCCAAC GCGGACTATCGCTGCACCGGTTGTTCGTTCCTTTGCGACCACATCGACGCCGCCAACCAGCATCTCAGGCATCACGACGT CTCCCTGGTCGTCTGCGCGCGCGCGCCTCTGGCCGAGCTCATGGATTTCAAGGCGCGGATGAATTGGCAGTTCGATTGGG TTTCGTCATTCGGCAGCGATTTCAATTTCGACTTCCAGGTATCGTTCACCGAGGACCAGATCAGCTCGGGCCAGGTGCTG TTCAATTTCGAAGAGGTCGCGATGACAGGCAGGGATCGCGGTGGCACGACCGTTTTCTACAGGGATGACGATGGCCAGAT CTATTGCACTTTCCAGGTGCGGGGCCGGGGCGGCGAGAACCTGATCGGGACCTATAGCTATCTCGACCTCACTCCCATCG GCCGCAATGAAAACGGGCCGTCGCATACGCTGGGCGATTGGGTCCGCCTTCACGATCAGTACGATGATCGCTGA
Upstream 100 bases:
>100_bases CGAAAATTGTGCAGCCATTGTCGGATCGCGCTTTTCAACGACGTCTTCAAGACGGGCAACGAGGCTGTCAGCATATGCCA GAGTGCGGAAGGAGCACGAC
Downstream 100 bases:
>100_bases CGATCCGATATCGCCGTGCGGTTGCGCAACGCCCCGGCGGGCCATCCTTCAGGAGCTTCGGCGATCATGTTTTCGCCAGA TGTTCGGCCCGCAGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSLADLFEGRSQLIIYHFMFPPN ADYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAELMDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVL FNFEEVAMTGRDRGGTTVFYRDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQYDDR
Sequences:
>Translated_237_residues MTDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSLADLFEGRSQLIIYHFMFPPN ADYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAELMDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVL FNFEEVAMTGRDRGGTTVFYRDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQYDDR >Mature_236_residues TDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSLADLFEGRSQLIIYHFMFPPNA DYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAELMDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVLF NFEEVAMTGRDRGGTTVFYRDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQYDDR
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27449; Mature: 27318
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSL CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHH ADLFEGRSQLIIYHFMFPPNADYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAEL HHHHCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH MDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVLFNFEEVAMTGRDRGGTTVFY HHHHHHCCCEEEEHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHCCCCCCCCEEEEE RDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQYDDR ECCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure TDHIIAPYSDWFEAHKSHLVKEKALTRQRQQLAAERRALPWLRIDKPYAFDTTQGRKSL CCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHHHH ADLFEGRSQLIIYHFMFPPNADYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAEL HHHHCCCCEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH MDFKARMNWQFDWVSSFGSDFNFDFQVSFTEDQISSGQVLFNFEEVAMTGRDRGGTTVFY HHHHHHCCCEEEEHHHCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHCCCCCCCCEEEEE RDDDGQIYCTFQVRGRGGENLIGTYSYLDLTPIGRNENGPSHTLGDWVRLHDQYDDR ECCCCEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA