| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yhhT [H]
Identifier: 13471741
GI number: 13471741
Start: 1498431
End: 1500419
Strand: Reverse
Name: yhhT [H]
Synonym: mll1810
Alternate gene names: 13471741
Gene position: 1500419-1498431 (Counterclockwise)
Preceding gene: 13471742
Following gene: 13471740
Centisome position: 21.32
GC content: 67.07
Gene sequence:
>1989_bases GTGGCGGCCAATCGTCGAAACGAGACGGCGTCCGAGGCGCATGGGTTGGACGATATTCTTTCCGCCGCCGCGCCCCGTCC GCGAACCGCATTGCCCAATGTGGCGACCACCGTGACGACGGTGGCTGCGCTGTATTTCGGCCGCGAGGTGTTCCTGCCGA TCGCGATCGCGCTGCTTTTGACCTTCGCGCTGGCGCCTTTGGTTTCGGCGCTCAAACGGGTCGGCATTCCCCGCATCGCC GCCGTCATCGTCAGTGTGCTGAGCGCATTCGCGGCCCTTGCCCTGTTCAGCTTCGTCGTCGCCACGCAGGTCAGCGAACT GGCGCAGAACATTCCGGTCTATCAGACCAACATCCTGGCCAAGATCCGGTCGCTCAAGGAAACCGGCGTCGGGGGCGGGA TCATCGCCAAATTGAGCAACGTGGTCGAGCGTGTCGGCCAGGAGATCGACCGGCAGGACGCCACGCTGCCGGCCGCCACG CCCGACAAGCAGCCGCGCGAGCCGGTGCCGGTCGAGATCGTGGCGCGCGAAAGGCCGCTCGAAGTCCTGCAGAACATCGT CGGTCCGCTGATCAGCCCGCTGGGATCGGCCGGACTGATCATCGTCGTCGTCATCTTCATGCTGCTCGAGCGGGAGGATT TGCGCGACCGCTTCATCCGGCTTGTCGGCTATGGCGACCTTCATCGCACCACCGAGGCGCTTCAAGATGCAGCCAAGCGC GTGGGCCGCTACCTGCTCATGCAATTGGTGGTCAACATCGTCTACGCCATACCGATTGCGATCGGGCTGTGGATCCTCGG CATTCCCAATGCGCTGCTGTGGGGGCTGCTGGCGCTGGCGCTGCGTTTCGTTCCCTATATCGGTCCGGCCATCGGCATGC TTTTGCCGCTGTTCCTGGCGCTGGCCGTGGCGCCCGGCTGGTCGCTCGTGCTGTGGACGGCGGCCCTGTTCGTGGTGATG GAACTGGTCACCGGCAACGTCGTGGAGCCCTGGCTGTACGGCTCGCGAACCGGACTGTCGCCGCTGGCGATCATCGTCGC GGCGATCTTCTGGACGTGGCTGTGGGGGCCGCTCGGGCTCGTCCTGTCGACGCCGCTCACTGTCTGCCTGGTGGTGCTTG GCAGGCACGTGCCGCAGTTTGAATTCCTCGACGTGCTGTTCGGCAACGAGCCGGTGCTCGAACCGCATGCGCGGCTCTAC CAGCGGCTCCTGGCCGGCGATCCGGACGAAGCCACCGACCATGCCGAGGAAATGCTCGAGGAGAAATATCTGGTCGAATT CTACGACAAGGTGGCCATCCCGGCCCTTTTGCTGGGCGAGCGCGACCGTGCGCGCGGCGTCATGGGCGACCAGCAGAGAC GGCAAGTGGCGGCCAGTGCGCTTGCGCTGGTGGCCAATCTCGAAGACGACGCGAAGGAGGAGGCGGACGGGGACGATGCG CCGCATGTCGCCGAGGCGGAGGGCGAACCCGGCGACGCCGTTGAAGAGGAGGCGACCGAACTGCCCGACGGCACCGGCCT GTCGGTGCTGTGCGCCGGCGGGCGCGGCGACCTCGACGATGCCGCCGCGGCGATGCTGGCACAGGTGCTGGAGGTCCAGG GGGCGACCGCGTCGAAGGCGGGTTTTGCCGAGATGGAACCGGCGAGCATCCGCCGCCTCGAGCTCGAGACCATCGACACC GTGGTGGTCGGCTTCCTGAACCGCGATTCCGTCAAGCACGCCCGCTTCCTGGTTCGGCGGCTGAAGCGGGCGAAGGCGGC ATTGCGGGTGGGCATCGTGTTCTGGTCGGAAACCGGCAACGGGGACAAGGAAGCGGCGGCCAAGCTCGCCCAGGACATCA ACGCGGATTTCGTCGCCCACGGCATGGTCGACGCCGTGACAGACGCGCTGTCGCACGAGCCGCCGGTGGCGCTGAAGCTC GTCGCCAAACGGCGCATGCGCCGGCCGCGCGCTGCGCCAAGGAAGGTGCCGGCCGCGGCGGCGGGATAG
Upstream 100 bases:
>100_bases ACCCTCCCGGAATTGAAGGGTAACCAGCGGTCTGCCGGCAAATGTTGCACGCCGGCTCAATATATCGGACCATGGCCGCT GGCAGGGGGAGAGACAGCAA
Downstream 100 bases:
>100_bases GAGCGGATGCCGATCATTGCGAGCGCTGGTTCGACCTGCCGGTAAAGGCGCTTATAACGGCTTTGCACCGTATCCCGGTT GTCGGCGCCAGCGGATCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MAANRRNETASEAHGLDDILSAAAPRPRTALPNVATTVTTVAALYFGREVFLPIAIALLLTFALAPLVSALKRVGIPRIA AVIVSVLSAFAALALFSFVVATQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPAAT PDKQPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKR VGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLALALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVM ELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLY QRLLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGERDRARGVMGDQQRRQVAASALALVANLEDDAKEEADGDDA PHVAEAEGEPGDAVEEEATELPDGTGLSVLCAGGRGDLDDAAAAMLAQVLEVQGATASKAGFAEMEPASIRRLELETIDT VVVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGNGDKEAAAKLAQDINADFVAHGMVDAVTDALSHEPPVALKL VAKRRMRRPRAAPRKVPAAAAG
Sequences:
>Translated_662_residues MAANRRNETASEAHGLDDILSAAAPRPRTALPNVATTVTTVAALYFGREVFLPIAIALLLTFALAPLVSALKRVGIPRIA AVIVSVLSAFAALALFSFVVATQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPAAT PDKQPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKR VGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLALALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVM ELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLY QRLLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGERDRARGVMGDQQRRQVAASALALVANLEDDAKEEADGDDA PHVAEAEGEPGDAVEEEATELPDGTGLSVLCAGGRGDLDDAAAAMLAQVLEVQGATASKAGFAEMEPASIRRLELETIDT VVVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGNGDKEAAAKLAQDINADFVAHGMVDAVTDALSHEPPVALKL VAKRRMRRPRAAPRKVPAAAAG >Mature_661_residues AANRRNETASEAHGLDDILSAAAPRPRTALPNVATTVTTVAALYFGREVFLPIAIALLLTFALAPLVSALKRVGIPRIAA VIVSVLSAFAALALFSFVVATQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPAATP DKQPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKRV GRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLALALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVME LVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQ RLLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGERDRARGVMGDQQRRQVAASALALVANLEDDAKEEADGDDAP HVAEAEGEPGDAVEEEATELPDGTGLSVLCAGGRGDLDDAAAAMLAQVLEVQGATASKAGFAEMEPASIRRLELETIDTV VVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGNGDKEAAAKLAQDINADFVAHGMVDAVTDALSHEPPVALKLV AKRRMRRPRAAPRKVPAAAAG
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
Organism=Escherichia coli, GI87082271, Length=340, Percent_Identity=25.2941176470588, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1787885, Length=137, Percent_Identity=36.4963503649635, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 71172; Mature: 71041
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANRRNETASEAHGLDDILSAAAPRPRTALPNVATTVTTVAALYFGREVFLPIAIALLL CCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFALAPLVSALKRVGIPRIAAVIVSVLSAFAALALFSFVVATQVSELAQNIPVYQTNILA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPAATPDKQPREPVPVEIVARERPL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCH EVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLALALRFVPYIGPAIGMLLPLFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVAPGWSLVLWTAALFVVMELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGL HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRLLAGDPDEATDHAEEMLE HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH EKYLVEFYDKVAIPALLLGERDRARGVMGDQQRRQVAASALALVANLEDDAKEEADGDDA HHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC PHVAEAEGEPGDAVEEEATELPDGTGLSVLCAGGRGDLDDAAAAMLAQVLEVQGATASKA CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC GFAEMEPASIRRLELETIDTVVVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC GDKEAAAKLAQDINADFVAHGMVDAVTDALSHEPPVALKLVAKRRMRRPRAAPRKVPAAA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC AG CC >Mature Secondary Structure AANRRNETASEAHGLDDILSAAAPRPRTALPNVATTVTTVAALYFGREVFLPIAIALLL CCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFALAPLVSALKRVGIPRIAAVIVSVLSAFAALALFSFVVATQVSELAQNIPVYQTNILA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH KIRSLKETGVGGGIIAKLSNVVERVGQEIDRQDATLPAATPDKQPREPVPVEIVARERPL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCH EVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGLLALALRFVPYIGPAIGMLLPLFLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVAPGWSLVLWTAALFVVMELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGL HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRLLAGDPDEATDHAEEMLE HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH EKYLVEFYDKVAIPALLLGERDRARGVMGDQQRRQVAASALALVANLEDDAKEEADGDDA HHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC PHVAEAEGEPGDAVEEEATELPDGTGLSVLCAGGRGDLDDAAAAMLAQVLEVQGATASKA CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC GFAEMEPASIRRLELETIDTVVVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC GDKEAAAKLAQDINADFVAHGMVDAVTDALSHEPPVALKLVAKRRMRRPRAAPRKVPAAA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]