| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471719
Identifier: 13471719
GI number: 13471719
Start: 1479000
End: 1479425
Strand: Reverse
Name: 13471719
Synonym: mll1779
Alternate gene names: NA
Gene position: 1479425-1479000 (Counterclockwise)
Preceding gene: 13471723
Following gene: 13471716
Centisome position: 21.03
GC content: 65.49
Gene sequence:
>426_bases ATGTCGGACTTCACCCAATCGCCGTGGCAGACCGCGGCCCTTCTCATTGCCCGCCTGATCTTCGCCGCCGTCTTCCTGAT GGCCGTGACCTTCAAATTCATGGGCATGGGTGCCACCGCAGGCTTCATCGCAGCCGCCGGCTTTCCGTTTCCGCTGTTCC TGGCATGGTGCGCGGCGATCCTGGAGGTGGCGCTGGTGCTGTGCTTCCTGAGCGGCGCCTTCTTCACGCAGGCAGCGCTG ATAGCCGCCGCCTATGTGCTGTTCCTCGGCTTCGCCTTCCACGGGCCCAGCCACTGGGCCGGCAACCAGGCCGAGTTCGG CTTCTTCGTCGACCATTTTTCGTTCATGGCCGGACTGCTGTTTGCCGCCGTGCATGGCCCGGGCAGGGTACTGGCGCTGA ACCTGGGCTGGCCGGGCAGGGCGTGA
Upstream 100 bases:
>100_bases GCGCCGGCAGCGCTTGCGGAAAAAATTCCAGGCCGGTGTCGGAACTGCGCGGCATTGCTCGTCCTTGGGTCGATATCCAT TGCAACCCTGGAGAGACAGC
Downstream 100 bases:
>100_bases GGCGAGCAACAAAATTGGAGGCGTTCGCCGTTTCCGCGAAACGGTGAACTGCCCGGGCCTCACAGCTGATCGTTATACGG TTCCTTCATCTGGCCGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAAL IAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA
Sequences:
>Translated_141_residues MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAAL IAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA >Mature_140_residues SDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAALI AAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15033; Mature: 14902
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH LEVALVLCFLSGAFFTQAALIAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH FAAVHGPGRVLALNLGWPGRA HHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure SDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH LEVALVLCFLSGAFFTQAALIAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH FAAVHGPGRVLALNLGWPGRA HHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA