Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471719

Identifier: 13471719

GI number: 13471719

Start: 1479000

End: 1479425

Strand: Reverse

Name: 13471719

Synonym: mll1779

Alternate gene names: NA

Gene position: 1479425-1479000 (Counterclockwise)

Preceding gene: 13471723

Following gene: 13471716

Centisome position: 21.03

GC content: 65.49

Gene sequence:

>426_bases
ATGTCGGACTTCACCCAATCGCCGTGGCAGACCGCGGCCCTTCTCATTGCCCGCCTGATCTTCGCCGCCGTCTTCCTGAT
GGCCGTGACCTTCAAATTCATGGGCATGGGTGCCACCGCAGGCTTCATCGCAGCCGCCGGCTTTCCGTTTCCGCTGTTCC
TGGCATGGTGCGCGGCGATCCTGGAGGTGGCGCTGGTGCTGTGCTTCCTGAGCGGCGCCTTCTTCACGCAGGCAGCGCTG
ATAGCCGCCGCCTATGTGCTGTTCCTCGGCTTCGCCTTCCACGGGCCCAGCCACTGGGCCGGCAACCAGGCCGAGTTCGG
CTTCTTCGTCGACCATTTTTCGTTCATGGCCGGACTGCTGTTTGCCGCCGTGCATGGCCCGGGCAGGGTACTGGCGCTGA
ACCTGGGCTGGCCGGGCAGGGCGTGA

Upstream 100 bases:

>100_bases
GCGCCGGCAGCGCTTGCGGAAAAAATTCCAGGCCGGTGTCGGAACTGCGCGGCATTGCTCGTCCTTGGGTCGATATCCAT
TGCAACCCTGGAGAGACAGC

Downstream 100 bases:

>100_bases
GGCGAGCAACAAAATTGGAGGCGTTCGCCGTTTCCGCGAAACGGTGAACTGCCCGGGCCTCACAGCTGATCGTTATACGG
TTCCTTCATCTGGCCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAAL
IAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA

Sequences:

>Translated_141_residues
MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAAL
IAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA
>Mature_140_residues
SDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAILEVALVLCFLSGAFFTQAALI
AAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLLFAAVHGPGRVLALNLGWPGRA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15033; Mature: 14902

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
LEVALVLCFLSGAFFTQAALIAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FAAVHGPGRVLALNLGWPGRA
HHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SDFTQSPWQTAALLIARLIFAAVFLMAVTFKFMGMGATAGFIAAAGFPFPLFLAWCAAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
LEVALVLCFLSGAFFTQAALIAAAYVLFLGFAFHGPSHWAGNQAEFGFFVDHFSFMAGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
FAAVHGPGRVLALNLGWPGRA
HHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA