Click here to switch to the map view.

The map label for this gene is 13471499

Identifier: 13471499

GI number: 13471499

Start: 1238264

End: 1238743

Strand: Direct

Name: 13471499

Synonym: mlr1489

Alternate gene names: NA

Gene position: 1238264-1238743 (Clockwise)

Preceding gene: 13471496

Following gene: 13471500

Centisome position: 17.6

GC content: 61.46

Gene sequence:

>480_bases
ATGTCCATCCCCGCCCCCTTCGTCTCCAAGCCCATGGACATCGAGAAGGACTGGATCGACTACAACGGCCATCTCAACAT
GGCCTATTACAACGTGCTGTTCGACCGCTGCTCGGACGAGGCCTTCGAGGCGATGGGCATGGGGCTGGACTATGTGAAAC
AGCGCCGTCTCACCATCTACACCGCCGAAGTCCATGTCTGCTACGTCCAGGAACTGCATCTGGACCACAAGGTCCAGGTG
TCCTTCCAGCTCATCGACCATGACGAGAAGCGGCTCAGGGCCTACCAGGAAATCCGCCATATCGACGGCTGGCTCGCCGC
CACCTCCGAGACGCTGTCGCTGCATGTCGACATGTCGGGGCCGAAGGTCGCGCCCTTCCCCGCCGATGTGATGGCCAAGG
TCGAAGCCATGCGCGCCGCCCATTCAGTGCTGCCGATGCCCGAGCGGGCCGGCCGTTCGATCGGTATCAAACGCAAATAG

Upstream 100 bases:

>100_bases
ATTCCTCCGCGAATGGACCAGCGTCCACGCTTGTTATGCGATTATGGATGCGTAGTCTCACCCACCAGGCCGTGTCCAGC
ACCAGAACAAGGAAGTTTCC

Downstream 100 bases:

>100_bases
GGCGAAGCCGACACCGCTCCGAACAGAGTGACGGGACCTCAAAGCCACACCGGCAAGCCAAAATCGCGGAACCCTCAAAT
CGGCCGGCGCCAGTGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily Protein; Thioesterase-Like Protein; 3-Hydroxyacyl-CoA Dehydrogenase C-Terminal Domain Family; Thioesterase Family Protein; 3-Hydroxyacyl-CoA Dehydrogenase Protein; Thioesterase-Like; 3-Hydroxybutyryl-CoA Dehydrogenase; 3-Hydroxyacyl-CoA Dehydrogenase; Lipolytic G-D-S-L; Thioesterase FcbC-Like; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSIPAPFVSKPMDIEKDWIDYNGHLNMAYYNVLFDRCSDEAFEAMGMGLDYVKQRRLTIYTAEVHVCYVQELHLDHKVQV
SFQLIDHDEKRLRAYQEIRHIDGWLAATSETLSLHVDMSGPKVAPFPADVMAKVEAMRAAHSVLPMPERAGRSIGIKRK

Sequences:

>Translated_159_residues
MSIPAPFVSKPMDIEKDWIDYNGHLNMAYYNVLFDRCSDEAFEAMGMGLDYVKQRRLTIYTAEVHVCYVQELHLDHKVQV
SFQLIDHDEKRLRAYQEIRHIDGWLAATSETLSLHVDMSGPKVAPFPADVMAKVEAMRAAHSVLPMPERAGRSIGIKRK
>Mature_158_residues
SIPAPFVSKPMDIEKDWIDYNGHLNMAYYNVLFDRCSDEAFEAMGMGLDYVKQRRLTIYTAEVHVCYVQELHLDHKVQVS
FQLIDHDEKRLRAYQEIRHIDGWLAATSETLSLHVDMSGPKVAPFPADVMAKVEAMRAAHSVLPMPERAGRSIGIKRK

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18219; Mature: 18088

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPAPFVSKPMDIEKDWIDYNGHLNMAYYNVLFDRCSDEAFEAMGMGLDYVKQRRLTIY
CCCCCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHCCHHHHHHHCCCHHHHHCCEEEEE
TAEVHVCYVQELHLDHKVQVSFQLIDHDEKRLRAYQEIRHIDGWLAATSETLSLHVDMSG
EEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHEECCCEEEEEEECCC
PKVAPFPADVMAKVEAMRAAHSVLPMPERAGRSIGIKRK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIPAPFVSKPMDIEKDWIDYNGHLNMAYYNVLFDRCSDEAFEAMGMGLDYVKQRRLTIY
CCCCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHCCHHHHHHHCCCHHHHHCCEEEEE
TAEVHVCYVQELHLDHKVQVSFQLIDHDEKRLRAYQEIRHIDGWLAATSETLSLHVDMSG
EEEEEEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHEECCCEEEEEEECCC
PKVAPFPADVMAKVEAMRAAHSVLPMPERAGRSIGIKRK
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA