| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471458
Identifier: 13471458
GI number: 13471458
Start: 1197846
End: 1199243
Strand: Direct
Name: 13471458
Synonym: mlr1435
Alternate gene names: NA
Gene position: 1197846-1199243 (Clockwise)
Preceding gene: 13471457
Following gene: 13471460
Centisome position: 17.02
GC content: 61.3
Gene sequence:
>1398_bases ATGGGCGCCAAGCATGGCTCGGGCAAGAACCGTCCGACATGGAAGGAAGAGCGCGAGAAGGAGGCGGCCGAGCTCGGCTT CAAGACGCAGCCCTACACGCTCATCATCGGCGGCGGCCAGGGCGGCATCGCGCTCGGCGCGCGGCTGCGGCAGCTCGGTG TGCCGACCATCATCGTCGAGAAGAACGAGCGGGCGGGCGACAGCTGGCGCAAGCGTTACAAGTCGCTCTGCCTGCACGAT CCGGTCTGGTACGACCATCTGCCCTATATCGATTTCCCGAAGAACTGGCCGGTCTTCTCACCCAAGGACAAGATCGGCGA CTGGCTGGAAATGTACACCAAGGTGATGGAGCTGAACTACTGGTCCTCGACGGAGGCCAAGAGCGCCTCCTATGACGACA AGACGAAGGAATGGACCGTCGTCGTCCGCCGCGACGGCAAGGACATCACCTTGAAGCCGAAGCAATTGGTGCTGGCGACC GGACAATCCGGCAAGGCCAATCTGCCGAAATTCAAGGGTATGGAGACCTTCAAGGGCGATCAGCACCACTCCTCGAAGCA CCCCGGCCCCGATGACTATGCCGGGAAAAGAGCCGTCGTCATCGGCTCCAACAATTCCGCCCATGACATCGCGGCGGCCC TTTGGGAGGCCGGCGCCGACGTCACCATGGTGCAACGCTCGAGCACCCATATCTCCAGATCCGACACGTTGATGGAGATC GGACTGGGTTCGCTCTATTCGGAGCAGGCGCTGCAGAATGGTATCACCACGGCCAAGGCCGATCTCATCTTCGCCTCCCT GCCCTACAAGATCCTGCACGAGTTCCAGATCCCGGCCTATGCCGAGATGAAGAAACGCGACGCGGCGTTCTACAAGGGAC TGGAAAAGGCCGGTTTCATGCTCGACTGGGGCGACGACGAGTCCGGCCTGTTCATGAAGTACCTCAGGCGCGGCTCAGGC TATTATATCGACGTCGGCGCCTCCCAGCTGATCATCGATGGCTCAATCAAGCTGAAGAGCGGCGTCGACGTCGAAGAGAT CAAGCAGCATTCGGTTCTGCTCAGTGACGGATCCGAACTGCCCGCGGACCTCATCGTCTACGCCACCGGCTATGGCTCGA TGAACGGCTGGGCCGCCGATCTGATCTCGCGCGAAACCGCCGACAAGGTCGGCAAATGCTGGGGCCTCGGCTCCAACACC ACCAAGGATCCCGGCCCCTGGGAAGGCGAGTTGCGCAACATGTGGAAGCCGACGCAGCAGGAAGCCTTGTGGTTCCATGG CGGCAATCTGCACCAGTCGCGCCACTATTCGCAGTTCCTGTCGCTGCAATTGAAGGCCAGGCATGCCGGCTTGCCAACGC CGGTCTACGGGCTGCAGAAGGTGCATCACAAGGGATAG
Upstream 100 bases:
>100_bases CTTTGGCCATATCAGGCTTAAGGACGGCAAGATCTGGACGCTGCTGACCACCATGGTCGAATTGAAAGGCCACGAGGAAC CGGCCGGCTTCGCACGGCCG
Downstream 100 bases:
>100_bases CCGGCAAGCGCGGGAGGTTTTCCGCCATCCCGCATCGGCAATGAGAAACCCCGCGCGGCATCTCCGCTGCGCGGGGTTTC GTTTCAGTCACGCAGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MGAKHGSGKNRPTWKEEREKEAAELGFKTQPYTLIIGGGQGGIALGARLRQLGVPTIIVEKNERAGDSWRKRYKSLCLHD PVWYDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNYWSSTEAKSASYDDKTKEWTVVVRRDGKDITLKPKQLVLAT GQSGKANLPKFKGMETFKGDQHHSSKHPGPDDYAGKRAVVIGSNNSAHDIAAALWEAGADVTMVQRSSTHISRSDTLMEI GLGSLYSEQALQNGITTAKADLIFASLPYKILHEFQIPAYAEMKKRDAAFYKGLEKAGFMLDWGDDESGLFMKYLRRGSG YYIDVGASQLIIDGSIKLKSGVDVEEIKQHSVLLSDGSELPADLIVYATGYGSMNGWAADLISRETADKVGKCWGLGSNT TKDPGPWEGELRNMWKPTQQEALWFHGGNLHQSRHYSQFLSLQLKARHAGLPTPVYGLQKVHHKG
Sequences:
>Translated_465_residues MGAKHGSGKNRPTWKEEREKEAAELGFKTQPYTLIIGGGQGGIALGARLRQLGVPTIIVEKNERAGDSWRKRYKSLCLHD PVWYDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNYWSSTEAKSASYDDKTKEWTVVVRRDGKDITLKPKQLVLAT GQSGKANLPKFKGMETFKGDQHHSSKHPGPDDYAGKRAVVIGSNNSAHDIAAALWEAGADVTMVQRSSTHISRSDTLMEI GLGSLYSEQALQNGITTAKADLIFASLPYKILHEFQIPAYAEMKKRDAAFYKGLEKAGFMLDWGDDESGLFMKYLRRGSG YYIDVGASQLIIDGSIKLKSGVDVEEIKQHSVLLSDGSELPADLIVYATGYGSMNGWAADLISRETADKVGKCWGLGSNT TKDPGPWEGELRNMWKPTQQEALWFHGGNLHQSRHYSQFLSLQLKARHAGLPTPVYGLQKVHHKG >Mature_464_residues GAKHGSGKNRPTWKEEREKEAAELGFKTQPYTLIIGGGQGGIALGARLRQLGVPTIIVEKNERAGDSWRKRYKSLCLHDP VWYDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNYWSSTEAKSASYDDKTKEWTVVVRRDGKDITLKPKQLVLATG QSGKANLPKFKGMETFKGDQHHSSKHPGPDDYAGKRAVVIGSNNSAHDIAAALWEAGADVTMVQRSSTHISRSDTLMEIG LGSLYSEQALQNGITTAKADLIFASLPYKILHEFQIPAYAEMKKRDAAFYKGLEKAGFMLDWGDDESGLFMKYLRRGSGY YIDVGASQLIIDGSIKLKSGVDVEEIKQHSVLLSDGSELPADLIVYATGYGSMNGWAADLISRETADKVGKCWGLGSNTT KDPGPWEGELRNMWKPTQQEALWFHGGNLHQSRHYSQFLSLQLKARHAGLPTPVYGLQKVHHKG
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503757, Length=212, Percent_Identity=25, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI4503759, Length=358, Percent_Identity=23.463687150838, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI50541965, Length=248, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI50541961, Length=248, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 51790; Mature: 51659
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKHGSGKNRPTWKEEREKEAAELGFKTQPYTLIIGGGQGGIALGARLRQLGVPTIIVE CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEE KNERAGDSWRKRYKSLCLHDPVWYDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNY CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC WSSTEAKSASYDDKTKEWTVVVRRDGKDITLKPKQLVLATGQSGKANLPKFKGMETFKGD CCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCCHHCCCC QHHSSKHPGPDDYAGKRAVVIGSNNSAHDIAAALWEAGADVTMVQRSSTHISRSDTLMEI CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHH GLGSLYSEQALQNGITTAKADLIFASLPYKILHEFQIPAYAEMKKRDAAFYKGLEKAGFM CCCHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE LDWGDDESGLFMKYLRRGSGYYIDVGASQLIIDGSIKLKSGVDVEEIKQHSVLLSDGSEL EECCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCEEECCCCCHHHHHHHEEEEECCCCC PADLIVYATGYGSMNGWAADLISRETADKVGKCWGLGSNTTKDPGPWEGELRNMWKPTQQ CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCC EALWFHGGNLHQSRHYSQFLSLQLKARHAGLPTPVYGLQKVHHKG CEEEEECCCCCHHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure GAKHGSGKNRPTWKEEREKEAAELGFKTQPYTLIIGGGQGGIALGARLRQLGVPTIIVE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEE KNERAGDSWRKRYKSLCLHDPVWYDHLPYIDFPKNWPVFSPKDKIGDWLEMYTKVMELNY CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC WSSTEAKSASYDDKTKEWTVVVRRDGKDITLKPKQLVLATGQSGKANLPKFKGMETFKGD CCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCCCHHCCCC QHHSSKHPGPDDYAGKRAVVIGSNNSAHDIAAALWEAGADVTMVQRSSTHISRSDTLMEI CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHH GLGSLYSEQALQNGITTAKADLIFASLPYKILHEFQIPAYAEMKKRDAAFYKGLEKAGFM CCCHHHHHHHHHCCCCHHHHHEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE LDWGDDESGLFMKYLRRGSGYYIDVGASQLIIDGSIKLKSGVDVEEIKQHSVLLSDGSEL EECCCCCCHHHHHHHHCCCCEEEEECCCEEEEECCEEECCCCCHHHHHHHEEEEECCCCC PADLIVYATGYGSMNGWAADLISRETADKVGKCWGLGSNTTKDPGPWEGELRNMWKPTQQ CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCC EALWFHGGNLHQSRHYSQFLSLQLKARHAGLPTPVYGLQKVHHKG CEEEEECCCCCHHHHHHHHHHHEEEHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA