| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471165
Identifier: 13471165
GI number: 13471165
Start: 888896
End: 890014
Strand: Reverse
Name: 13471165
Synonym: mll1060
Alternate gene names: NA
Gene position: 890014-888896 (Counterclockwise)
Preceding gene: 13471168
Following gene: 13471163
Centisome position: 12.65
GC content: 65.5
Gene sequence:
>1119_bases ATGGCGGGCTATTCGACACGGGTCAGATCCGACATTGCGCGGTGGCTTCAGGCAGGCCTGATCGACGCCGCCACGGCCGG TGCGCTGACGCGAGACGTCGAGGCCAATACGCGCAAATCACTGAGCTTCGGTTCGATCCTGGCCATGATGGCGGCCCTGC TGTTTGGCGCGGCCATCCTGATCTTCGTCGCCGCCAACTGGGATGCCATCCCGCGGCTGGCGCGGGTCTCGGCGCTGTTT GCCATCATCCTTGGCGGTTATGTCGGCGGCGCGGTGCTGAAGACGCGCGACCACGCGGCGATCGGCGAAGCGCTGTGGAT CGTGGCTGCCGCTGCCTTCGGCGGTTCGATCGCGCTGATCGGCCAGATGTATCATCTGTCCGGCGACGAGGCTTCCGCGC TGGTGACCTGGGGCGCCGGTACGGCGCTGGCGGCGGTCGCGCTGCGGTCGAACCCGCTGACCGTCGCTTCGGTCGGCATC GCCGACGTCTGGCTGTTCTTGAAGGGGTTCGACTACTACAGCCGCAACAACTTTCCGCATGCTTTCGTCGCCATGGCCAT CGTGCTGTTCGCCGTCTCGTTCTGGACCCGCAGCCAGGCCGCGCGGCACCTGATCATCCTGTCGCTGCTCTTCTATCTCG TGCTGTTGGCCGGGAATCATGCGACGCTGCCGGTGGCGATCCCTCTGGTCATCGTCTCCGCCGCGCTCTTCGCGGCTTCC GTCGTCGCGCCGGAACCGGTCGACAGGATCATGCAGCTCGGCGGTTACTTGCCCCTGCATGCGCTGCTCGGCTTCCTAAC CGGGCTCGCCATCATCCAATTCGAACTGGCCGACGAAAGCACCTACAACAACGGCTTCGCCATTGCCTCGGTCGTCGCGC TGGCCGGCATCGTCGCCGCCATCGTGCTGGCGGGACGGGAGAGCCGCGGCCTGCGCTGGTTTGCCTATCTCGGCTTCGCC TTCGAACTCGCCATGATCTATGTCGTGACCTTGCAGTCGATGCTCGACACGGCCGGCTTCTTCCTTGCCGCCGCGGTGCT GCTCGGCATCCTGGCGATCATCATCATCCGCGTCGAAAAACGCATGAAGGGTCCGGCAACGGGGGGAGCCACCGCATGA
Upstream 100 bases:
>100_bases CTTCACGGACCTGACACAAAGAAGCCAGAATCGGAAAGTGCCGTGGCGTCAACGGTTTGGCTGGTTCGGCTGAAAAACGA CCTAGCGGGGGAGGCAGGGC
Downstream 100 bases:
>100_bases TGACCGGAAAGAAGCTTGTTATCTCGGCGCTGGTGCTGGCACTTGTCCAGATCGGGTTCCTGAGCTGGATCATCGCCGGC CGGGCGGCGATCCTGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MAGYSTRVRSDIARWLQAGLIDAATAGALTRDVEANTRKSLSFGSILAMMAALLFGAAILIFVAANWDAIPRLARVSALF AIILGGYVGGAVLKTRDHAAIGEALWIVAAAAFGGSIALIGQMYHLSGDEASALVTWGAGTALAAVALRSNPLTVASVGI ADVWLFLKGFDYYSRNNFPHAFVAMAIVLFAVSFWTRSQAARHLIILSLLFYLVLLAGNHATLPVAIPLVIVSAALFAAS VVAPEPVDRIMQLGGYLPLHALLGFLTGLAIIQFELADESTYNNGFAIASVVALAGIVAAIVLAGRESRGLRWFAYLGFA FELAMIYVVTLQSMLDTAGFFLAAAVLLGILAIIIIRVEKRMKGPATGGATA
Sequences:
>Translated_372_residues MAGYSTRVRSDIARWLQAGLIDAATAGALTRDVEANTRKSLSFGSILAMMAALLFGAAILIFVAANWDAIPRLARVSALF AIILGGYVGGAVLKTRDHAAIGEALWIVAAAAFGGSIALIGQMYHLSGDEASALVTWGAGTALAAVALRSNPLTVASVGI ADVWLFLKGFDYYSRNNFPHAFVAMAIVLFAVSFWTRSQAARHLIILSLLFYLVLLAGNHATLPVAIPLVIVSAALFAAS VVAPEPVDRIMQLGGYLPLHALLGFLTGLAIIQFELADESTYNNGFAIASVVALAGIVAAIVLAGRESRGLRWFAYLGFA FELAMIYVVTLQSMLDTAGFFLAAAVLLGILAIIIIRVEKRMKGPATGGATA >Mature_371_residues AGYSTRVRSDIARWLQAGLIDAATAGALTRDVEANTRKSLSFGSILAMMAALLFGAAILIFVAANWDAIPRLARVSALFA IILGGYVGGAVLKTRDHAAIGEALWIVAAAAFGGSIALIGQMYHLSGDEASALVTWGAGTALAAVALRSNPLTVASVGIA DVWLFLKGFDYYSRNNFPHAFVAMAIVLFAVSFWTRSQAARHLIILSLLFYLVLLAGNHATLPVAIPLVIVSAALFAASV VAPEPVDRIMQLGGYLPLHALLGFLTGLAIIQFELADESTYNNGFAIASVVALAGIVAAIVLAGRESRGLRWFAYLGFAF ELAMIYVVTLQSMLDTAGFFLAAAVLLGILAIIIIRVEKRMKGPATGGATA
Specific function: Unknown
COG id: COG4872
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39071; Mature: 38939
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGYSTRVRSDIARWLQAGLIDAATAGALTRDVEANTRKSLSFGSILAMMAALLFGAAIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHH IFVAANWDAIPRLARVSALFAIILGGYVGGAVLKTRDHAAIGEALWIVAAAAFGGSIALI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHCCHHHHH GQMYHLSGDEASALVTWGAGTALAAVALRSNPLTVASVGIADVWLFLKGFDYYSRNNFPH HHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHCCCCCCH AFVAMAIVLFAVSFWTRSQAARHLIILSLLFYLVLLAGNHATLPVAIPLVIVSAALFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVAPEPVDRIMQLGGYLPLHALLGFLTGLAIIQFELADESTYNNGFAIASVVALAGIVAA HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH IVLAGRESRGLRWFAYLGFAFELAMIYVVTLQSMLDTAGFFLAAAVLLGILAIIIIRVEK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMKGPATGGATA HHCCCCCCCCCC >Mature Secondary Structure AGYSTRVRSDIARWLQAGLIDAATAGALTRDVEANTRKSLSFGSILAMMAALLFGAAIL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHH IFVAANWDAIPRLARVSALFAIILGGYVGGAVLKTRDHAAIGEALWIVAAAAFGGSIALI HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHHHCCHHHHH GQMYHLSGDEASALVTWGAGTALAAVALRSNPLTVASVGIADVWLFLKGFDYYSRNNFPH HHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHCCCCCCH AFVAMAIVLFAVSFWTRSQAARHLIILSLLFYLVLLAGNHATLPVAIPLVIVSAALFAAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VVAPEPVDRIMQLGGYLPLHALLGFLTGLAIIQFELADESTYNNGFAIASVVALAGIVAA HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH IVLAGRESRGLRWFAYLGFAFELAMIYVVTLQSMLDTAGFFLAAAVLLGILAIIIIRVEK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMKGPATGGATA HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA