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The map label for this gene is ynaI [H]

Identifier: 13471089

GI number: 13471089

Start: 795447

End: 796679

Strand: Direct

Name: ynaI [H]

Synonym: mlr0973

Alternate gene names: 13471089

Gene position: 795447-796679 (Clockwise)

Preceding gene: 13471088

Following gene: 13471090

Centisome position: 11.31

GC content: 58.56

Gene sequence:

>1233_bases
TTGCAGGACCTCGTCGTTGGCGTCGTATACGTCGGGGCGTCGCTGTCGATTCTTGCGTTTGTTTTTGGGGTGCCAATCGG
GGCACTGATTGCGACATCTGGTGCGTTTGCAATCGTGCTTGGATTGGCACTCCAGAATACGCTGAGCGACGTGTTTTCCG
GTATCGCGCTTAACCTTGGCCGACCCTATTTGCTCGGCGACTGGATCGTGCTGAGCGACGGCATCGAAGGCCGTGTCGTT
GAGACTGACTGGCGCGCAACGCACTTGCTTACCCCGGCGAATAATGTCGTGGCGCTACCAAACAGTGTTTTGGCCAAAAT
GGGCCTGACCAATGTCAGCAGCCCCGATGAAACCCATGGCCTGTCGATCCTAGTGAGACTGGCGCCGACAAAGTCGCCGG
CTGCCATTGTGGAGGCGATGCGCGCCGTATTCCTTAGCTCGGACTCGATCGTAAAGGCGCCTCCTCCGGTGGTCGCCATC
AAAGGCCTAGACGCTGATGCAATCGTGATCGAGCTGTCTTTCAGGGCACCAAATATCGGCCAGAGAATTGCCGCGAGGAA
CGACGTTTTCGATCTCGTCTACCGGCATGCCAAGTCCGCAGGTTTACATTTGGCAACTCAATCGTCTTCGATTTCGGCGG
CGAGTCTACCGAACAGGGAGACCTGGCCCTTTACCGCGATAGAACTGATCGAGGGGACGGCGTTGTTTTCGGCGCTGACG
GACCAAGAACGAGAAGCCCTCGCCGAGACGGCTCTGGTCCGCACTTACCGCAAGGGCGAAATCCTCGTGCGAGAGGGCGA
AATGTTGCAGTCTCTGATGATCGTTCGCTCGGGTGTTGTCGTCCGGCAACGTGGCGAAGAGGCCCATCCGCAGGAAATCG
GTCATCTTGCTCCCGGCGACTTCTTCGGAGAGACGGGGTTGCTTGCAGGCTATCGCGAGCCGTTGACATTGCGGGCTGTG
ACTCAGGTGGTCGCTTACGAAATAGATCAGCAGAGCTTTGCCCCCCTTCTGCTGAGCCGACCCGAGATGGCCGAAGAGCT
CGCGGCGATACTCTCTGCAAGTATGTCGACGGTCGAAGAAAGCGGCCTGAACAGACAGCGGCATCCGATTTCCAAGTCCG
CGCTTCGGGAAGCCATTCACACGGCTTTCCGCGCGGTGCCGTTCAGGCGCGTGGTGGGGGGCCCGGACAGGGCGCAGAAG
AAGAGAGAAAGCCATGGCCATCTTGCAGAATGA

Upstream 100 bases:

>100_bases
ATTGGCGAAAATCCTCTGGTGGGTTCACTGTGCCTGGGCATTGATCGGATTGGTCCGGATTTATGTCGTATTTGAACGAA
AACCGCACGAGGCGCGTCTT

Downstream 100 bases:

>100_bases
AGCCACACATATCGACACCAGCTTTTTGCCCCCATTCCCAGAACGGCCCAGCGACTGCTTGGTACGGCGCGTTTTGCCCA
CTCTGCACCATCGTACGGTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MQDLVVGVVYVGASLSILAFVFGVPIGALIATSGAFAIVLGLALQNTLSDVFSGIALNLGRPYLLGDWIVLSDGIEGRVV
ETDWRATHLLTPANNVVALPNSVLAKMGLTNVSSPDETHGLSILVRLAPTKSPAAIVEAMRAVFLSSDSIVKAPPPVVAI
KGLDADAIVIELSFRAPNIGQRIAARNDVFDLVYRHAKSAGLHLATQSSSISAASLPNRETWPFTAIELIEGTALFSALT
DQEREALAETALVRTYRKGEILVREGEMLQSLMIVRSGVVVRQRGEEAHPQEIGHLAPGDFFGETGLLAGYREPLTLRAV
TQVVAYEIDQQSFAPLLLSRPEMAEELAAILSASMSTVEESGLNRQRHPISKSALREAIHTAFRAVPFRRVVGGPDRAQK
KRESHGHLAE

Sequences:

>Translated_410_residues
MQDLVVGVVYVGASLSILAFVFGVPIGALIATSGAFAIVLGLALQNTLSDVFSGIALNLGRPYLLGDWIVLSDGIEGRVV
ETDWRATHLLTPANNVVALPNSVLAKMGLTNVSSPDETHGLSILVRLAPTKSPAAIVEAMRAVFLSSDSIVKAPPPVVAI
KGLDADAIVIELSFRAPNIGQRIAARNDVFDLVYRHAKSAGLHLATQSSSISAASLPNRETWPFTAIELIEGTALFSALT
DQEREALAETALVRTYRKGEILVREGEMLQSLMIVRSGVVVRQRGEEAHPQEIGHLAPGDFFGETGLLAGYREPLTLRAV
TQVVAYEIDQQSFAPLLLSRPEMAEELAAILSASMSTVEESGLNRQRHPISKSALREAIHTAFRAVPFRRVVGGPDRAQK
KRESHGHLAE
>Mature_410_residues
MQDLVVGVVYVGASLSILAFVFGVPIGALIATSGAFAIVLGLALQNTLSDVFSGIALNLGRPYLLGDWIVLSDGIEGRVV
ETDWRATHLLTPANNVVALPNSVLAKMGLTNVSSPDETHGLSILVRLAPTKSPAAIVEAMRAVFLSSDSIVKAPPPVVAI
KGLDADAIVIELSFRAPNIGQRIAARNDVFDLVYRHAKSAGLHLATQSSSISAASLPNRETWPFTAIELIEGTALFSALT
DQEREALAETALVRTYRKGEILVREGEMLQSLMIVRSGVVVRQRGEEAHPQEIGHLAPGDFFGETGLLAGYREPLTLRAV
TQVVAYEIDQQSFAPLLLSRPEMAEELAAILSASMSTVEESGLNRQRHPISKSALREAIHTAFRAVPFRRVVGGPDRAQK
KRESHGHLAE

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=194, Percent_Identity=27.319587628866, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 43994; Mature: 43994

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLVVGVVYVGASLSILAFVFGVPIGALIATSGAFAIVLGLALQNTLSDVFSGIALNLG
CCCCEEEHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RPYLLGDWIVLSDGIEGRVVETDWRATHLLTPANNVVALPNSVLAKMGLTNVSSPDETHG
CCEEEECEEEEECCCCCCEEECCCCEEEEECCCCCEEECCHHHHHHHCCCCCCCCCCCCC
LSILVRLAPTKSPAAIVEAMRAVFLSSDSIVKAPPPVVAIKGLDADAIVIELSFRAPNIG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCEEEEEEEECCCCHH
QRIAARNDVFDLVYRHAKSAGLHLATQSSSISAASLPNRETWPFTAIELIEGTALFSALT
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DQEREALAETALVRTYRKGEILVREGEMLQSLMIVRSGVVVRQRGEEAHPQEIGHLAPGD
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCCCC
FFGETGLLAGYREPLTLRAVTQVVAYEIDQQSFAPLLLSRPEMAEELAAILSASMSTVEE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
SGLNRQRHPISKSALREAIHTAFRAVPFRRVVGGPDRAQKKRESHGHLAE
HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQDLVVGVVYVGASLSILAFVFGVPIGALIATSGAFAIVLGLALQNTLSDVFSGIALNLG
CCCCEEEHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RPYLLGDWIVLSDGIEGRVVETDWRATHLLTPANNVVALPNSVLAKMGLTNVSSPDETHG
CCEEEECEEEEECCCCCCEEECCCCEEEEECCCCCEEECCHHHHHHHCCCCCCCCCCCCC
LSILVRLAPTKSPAAIVEAMRAVFLSSDSIVKAPPPVVAIKGLDADAIVIELSFRAPNIG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCCEECCCCEEEEECCCCCEEEEEEEECCCCHH
QRIAARNDVFDLVYRHAKSAGLHLATQSSSISAASLPNRETWPFTAIELIEGTALFSALT
HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHH
DQEREALAETALVRTYRKGEILVREGEMLQSLMIVRSGVVVRQRGEEAHPQEIGHLAPGD
HHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCCCC
FFGETGLLAGYREPLTLRAVTQVVAYEIDQQSFAPLLLSRPEMAEELAAILSASMSTVEE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
SGLNRQRHPISKSALREAIHTAFRAVPFRRVVGGPDRAQKKRESHGHLAE
HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]