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The map label for this gene is petA [H]

Identifier: 13471087

GI number: 13471087

Start: 793208

End: 793738

Strand: Direct

Name: petA [H]

Synonym: mlr0970

Alternate gene names: 13471087

Gene position: 793208-793738 (Clockwise)

Preceding gene: 13471084

Following gene: 13471088

Centisome position: 11.27

GC content: 59.32

Gene sequence:

>531_bases
ATGCAATCGCCAAGGAGGCTACTTTTCGGCAACGTAGGAGCCGCCATTATGGCCGATATTCTCCAAAGGGAATCTGGCAG
TGCCGAACACGCAGTGGCCACCGAGGAACTGACCTCGGTCGAGGTCGACGTCTCCGCTCTAGCGCCGGGAACGTCGGTGG
TTGTCAACTGGAACGGCAAGCCCGTCGTCGTGCGACACCGTACCGAAAAAGAGCGAAAGGACAGTGAGGCGGTCAATTTG
GCCGACCTCAAGGACCCGATTGCGCGCAATGCCAATCTGCCGGCAGATGCTCCGGCAACCGATGCCAATCGCGCCGCGCC
CGGGAAGGAAGCATGGATTGTGATAGTCCAGGTTTGCACGCATCTGGGCTGCATCCCGTCCTACAAAGAAGGCGATTTCG
GCGGCTGGCTCTGTCCGTGCCACGGGTCGCAATACGACAGCGCCGGCCGCGTTCGCAAAGGACCGGCACTTGAAAACATG
GCGGTGCCGGAGTTCCAATTCATCTCCGATACCAAAATCCGTATCGGCTAA

Upstream 100 bases:

>100_bases
GACACGTCAGCCCTCGGCACGATGGCTCACATACCGCCACGACTGCAATAGTCTTCTCCGCAAGAAAACTCGAAGAGCGT
CGCCTTTGGTTGCTCGATAT

Downstream 100 bases:

>100_bases
GGCGGAGGACATTCGGATGCGCGAGGGCCATTCGACCTACAAGCCAAAGACCGGTATCGAACGCTGGCTCGACGGCCGGC
TGCCACTGCCGCGGGTGGTG

Product: ubiquinol-cytochrome c reductase iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MQSPRRLLFGNVGAAIMADILQRESGSAEHAVATEELTSVEVDVSALAPGTSVVVNWNGKPVVVRHRTEKERKDSEAVNL
ADLKDPIARNANLPADAPATDANRAAPGKEAWIVIVQVCTHLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPALENM
AVPEFQFISDTKIRIG

Sequences:

>Translated_176_residues
MQSPRRLLFGNVGAAIMADILQRESGSAEHAVATEELTSVEVDVSALAPGTSVVVNWNGKPVVVRHRTEKERKDSEAVNL
ADLKDPIARNANLPADAPATDANRAAPGKEAWIVIVQVCTHLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPALENM
AVPEFQFISDTKIRIG
>Mature_176_residues
MQSPRRLLFGNVGAAIMADILQRESGSAEHAVATEELTSVEVDVSALAPGTSVVVNWNGKPVVVRHRTEKERKDSEAVNL
ADLKDPIARNANLPADAPATDANRAAPGKEAWIVIVQVCTHLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPALENM
AVPEFQFISDTKIRIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=140, Percent_Identity=42.1428571428571, Blast_Score=133, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI17540418, Length=176, Percent_Identity=36.3636363636364, Blast_Score=124, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320811, Length=137, Percent_Identity=44.5255474452555, Blast_Score=137, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24580896, Length=151, Percent_Identity=38.4105960264901, Blast_Score=119, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 18889; Mature: 18889

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPRRLLFGNVGAAIMADILQRESGSAEHAVATEELTSVEVDVSALAPGTSVVVNWNGK
CCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEHHHCCCCCEEEEEECCC
PVVVRHRTEKERKDSEAVNLADLKDPIARNANLPADAPATDANRAAPGKEAWIVIVQVCT
EEEEECCCCHHHHHHHCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPALENMAVPEFQFISDTKIRIG
HHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEC
>Mature Secondary Structure
MQSPRRLLFGNVGAAIMADILQRESGSAEHAVATEELTSVEVDVSALAPGTSVVVNWNGK
CCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEHHHCCCCCEEEEEECCC
PVVVRHRTEKERKDSEAVNLADLKDPIARNANLPADAPATDANRAAPGKEAWIVIVQVCT
EEEEECCCCHHHHHHHCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPALENMAVPEFQFISDTKIRIG
HHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2820981; 7601123 [H]