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The map label for this gene is 13471079

Identifier: 13471079

GI number: 13471079

Start: 780697

End: 780948

Strand: Direct

Name: 13471079

Synonym: msr0960

Alternate gene names: NA

Gene position: 780697-780948 (Clockwise)

Preceding gene: 13471078

Following gene: 13471080

Centisome position: 11.1

GC content: 55.95

Gene sequence:

>252_bases
ATGAGGCCGGTGGTGAAAACGCTCGGAACGCTGCGCCACAAGTCATTGATCACGATGCTGATTGCAAAGCGTGAGGCTAG
CGGGCTGACACAGACCGAGCTCGCCGAAAAGCTCGGCGAATATCAGTCGTTTGTCGCTCGACTCGAAAGCGGCCAACGCC
GCGTCGACGTAGTCGAATTCATCGATCTGGCGAAAATCCTGGGGTTCGACCCTTCTTCAGCCATCAAGAGATTGGCAGCA
GAACCAGACTGA

Upstream 100 bases:

>100_bases
TTGCGCCATCTTGGATTCCTCCAATTCGACATGGCTGGGTCGTATCTGAATTTAAGATAACTGGAAATCAGATATAATTG
AAGCCCTCATCTGGAACTGG

Downstream 100 bases:

>100_bases
ATCTAGCTGAGACGGTCCCAACCGCTCGCGAGCGCGCCACACAACAGCGCCGTAGCGAGCGAGCGGCGGCTTTGCGCCTA
TTGCGGACTTAGAGTTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MRPVVKTLGTLRHKSLITMLIAKREASGLTQTELAEKLGEYQSFVARLESGQRRVDVVEFIDLAKILGFDPSSAIKRLAA
EPD

Sequences:

>Translated_83_residues
MRPVVKTLGTLRHKSLITMLIAKREASGLTQTELAEKLGEYQSFVARLESGQRRVDVVEFIDLAKILGFDPSSAIKRLAA
EPD
>Mature_83_residues
MRPVVKTLGTLRHKSLITMLIAKREASGLTQTELAEKLGEYQSFVARLESGQRRVDVVEFIDLAKILGFDPSSAIKRLAA
EPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9212; Mature: 9212

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50943 HTH_CROC1 ; PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVVKTLGTLRHKSLITMLIAKREASGLTQTELAEKLGEYQSFVARLESGQRRVDVVEF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IDLAKILGFDPSSAIKRLAAEPD
HHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRPVVKTLGTLRHKSLITMLIAKREASGLTQTELAEKLGEYQSFVARLESGQRRVDVVEF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IDLAKILGFDPSSAIKRLAAEPD
HHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA