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The map label for this gene is intA [C]

Identifier: 13471077

GI number: 13471077

Start: 778710

End: 779963

Strand: Direct

Name: intA [C]

Synonym: mlr0958

Alternate gene names: 13471077

Gene position: 778710-779963 (Clockwise)

Preceding gene: 13471076

Following gene: 13471078

Centisome position: 11.07

GC content: 56.86

Gene sequence:

>1254_bases
GTGCCAAGCCTTACCGATGGAGAGATTCGCCGCGCTTTAAAGCAGGTCGAGGAGACCGGAAAGCAGCAGAACCTTGTCGA
TGGCGAGGGTCACGGAACAGGCCGCCTCGTTCTCGTGATAAAGCCGATGCCGACCCGCGTAACGGCGGACTGGATGGCCC
AGCAATGGCGAGACCAAAAGCGTCTCAAAAAAAAGTTCGGCTCGTATCCGTCAATGGGCCTCAGCCAGGCTCGCGAGATT
TTCAGACGCGATTTCGCCGACATGATCCAGAAGGGACGCAGCATCAAGATTGCAGGCGACACGCGACCCGGCACGGTCGC
CGATCTGTTTGAGGCTTACGTCGCGTCGCTCAAGGCAGATGGAAAACCGTCCTGGAAGGAGGCCGAAAAGGGATTGAACA
AGATCGCCGATTCGCTCGGTCGCAACCGCCCTGCCCGTGACATCGAGCCCGATGAGATCAGGGACATCATTCGACCGATC
TATCAGCGAGGCAAACGGTCCATGGCCGATCATGTTCGCAGCTATATTCGTTCGGCCTACAGTTGGGGGCTGAAATCCGA
GCACGACTACCGCTCGACCTCTGTCCGTCGCTTTCGTCTCGTCTACAATCCGGCTGCTGGTATTCCGACAGAACCAAAAA
ACGTTGGAACGCGTTGGTTGGACGAAGAGGAATTTGTCCGTCTCTATCGCTGGCTCGAATATCCCGATGCGCCGGTACAT
CCCCCTTACACGCGTGCAGTAAGAATTCTTATGCTGACCGGCCAACGCGTCGAGGAGATTGCTCGGCTACACGTCGATCA
ATGGGATGCCGCTGAGTGCATCATCGACTGGTCCAAGACCAAGAATGGAAAGCCTCACGCCATCCCCGTGCCCAAGATCG
CGGCCGAGCTTATCGGGTCGATCAAGCCGAATGAATTTGGTTGGTTTTTCCCATCCGCAACCGACCCGTCCAAGCCTGTC
AGTCATGGAACGCTCTATTCGTTCATGTGGCGACAGCGCGATCGCGAGGTCATTCCCGTCGTGACAAACCGCGATCTCCG
GCGAACCTGGAAGACGCTTGCCGGCAAGGCAGGTCTCTCGAAAGAGATCCGAGACCGATTGCAGAACCACACTCTGCAGG
ACGTCAGTTCCAAGAGCTACGATCGCTGGAATTACATGCCGGAAAAGCGTGCTGCCATGGCCCGGTGGGACAAGTTTGTC
CGCGAGCTCGTGACGAAGAAGAAGCGTAAAGTCGCCCTTAAGGAAGCTGCATGA

Upstream 100 bases:

>100_bases
TTGGGGTCGGTTTTAGGGGGATCGAAGGCCCGTTTGGACCCAACCACAGACCCCTACTACCCGTCAGCCGATCCCACTCG
AAAGCCTACGGGAGACCCCA

Downstream 100 bases:

>100_bases
GCTAGCAACTGCTTTTTTGGCGTTTGAGACGGGACAGGGCCGACTTGATTTCTAAAATTCAGCCGGTTTTGGAAGAACGG
ATGTTTCCGCGAACGATTTC

Product: prbable integrase

Products: NA

Alternate protein names: Integrase; Phage Integrase Family Protein; Phage Integrase; Transposase; Phage-Like Integrase; Prbable Integrase; Phage Integrase/Recombinase Protein; Prophage CP4-Like Integrase; Phage Integrase Family Site Specific Recombinase; Integrative Genetic Element

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPSLTDGEIRRALKQVEETGKQQNLVDGEGHGTGRLVLVIKPMPTRVTADWMAQQWRDQKRLKKKFGSYPSMGLSQAREI
FRRDFADMIQKGRSIKIAGDTRPGTVADLFEAYVASLKADGKPSWKEAEKGLNKIADSLGRNRPARDIEPDEIRDIIRPI
YQRGKRSMADHVRSYIRSAYSWGLKSEHDYRSTSVRRFRLVYNPAAGIPTEPKNVGTRWLDEEEFVRLYRWLEYPDAPVH
PPYTRAVRILMLTGQRVEEIARLHVDQWDAAECIIDWSKTKNGKPHAIPVPKIAAELIGSIKPNEFGWFFPSATDPSKPV
SHGTLYSFMWRQRDREVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKSYDRWNYMPEKRAAMARWDKFV
RELVTKKKRKVALKEAA

Sequences:

>Translated_417_residues
MPSLTDGEIRRALKQVEETGKQQNLVDGEGHGTGRLVLVIKPMPTRVTADWMAQQWRDQKRLKKKFGSYPSMGLSQAREI
FRRDFADMIQKGRSIKIAGDTRPGTVADLFEAYVASLKADGKPSWKEAEKGLNKIADSLGRNRPARDIEPDEIRDIIRPI
YQRGKRSMADHVRSYIRSAYSWGLKSEHDYRSTSVRRFRLVYNPAAGIPTEPKNVGTRWLDEEEFVRLYRWLEYPDAPVH
PPYTRAVRILMLTGQRVEEIARLHVDQWDAAECIIDWSKTKNGKPHAIPVPKIAAELIGSIKPNEFGWFFPSATDPSKPV
SHGTLYSFMWRQRDREVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKSYDRWNYMPEKRAAMARWDKFV
RELVTKKKRKVALKEAA
>Mature_416_residues
PSLTDGEIRRALKQVEETGKQQNLVDGEGHGTGRLVLVIKPMPTRVTADWMAQQWRDQKRLKKKFGSYPSMGLSQAREIF
RRDFADMIQKGRSIKIAGDTRPGTVADLFEAYVASLKADGKPSWKEAEKGLNKIADSLGRNRPARDIEPDEIRDIIRPIY
QRGKRSMADHVRSYIRSAYSWGLKSEHDYRSTSVRRFRLVYNPAAGIPTEPKNVGTRWLDEEEFVRLYRWLEYPDAPVHP
PYTRAVRILMLTGQRVEEIARLHVDQWDAAECIIDWSKTKNGKPHAIPVPKIAAELIGSIKPNEFGWFFPSATDPSKPVS
HGTLYSFMWRQRDREVIPVVTNRDLRRTWKTLAGKAGLSKEIRDRLQNHTLQDVSSKSYDRWNYMPEKRAAMARWDKFVR
ELVTKKKRKVALKEAA

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48154; Mature: 48023

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLTDGEIRRALKQVEETGKQQNLVDGEGHGTGRLVLVIKPMPTRVTADWMAQQWRDQK
CCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RLKKKFGSYPSMGLSQAREIFRRDFADMIQKGRSIKIAGDTRPGTVADLFEAYVASLKAD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
GKPSWKEAEKGLNKIADSLGRNRPARDIEPDEIRDIIRPIYQRGKRSMADHVRSYIRSAY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWGLKSEHDYRSTSVRRFRLVYNPAAGIPTEPKNVGTRWLDEEEFVRLYRWLEYPDAPVH
HCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC
PPYTRAVRILMLTGQRVEEIARLHVDQWDAAECIIDWSKTKNGKPHAIPVPKIAAELIGS
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHEEHHHCCCCCCCCCCHHHHHHHHHHC
IKPNEFGWFFPSATDPSKPVSHGTLYSFMWRQRDREVIPVVTNRDLRRTWKTLAGKAGLS
CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEECEECCCHHHHHHHHHHCCCCCC
KEIRDRLQNHTLQDVSSKSYDRWNYMPEKRAAMARWDKFVRELVTKKKRKVALKEAA
HHHHHHHHHCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSLTDGEIRRALKQVEETGKQQNLVDGEGHGTGRLVLVIKPMPTRVTADWMAQQWRDQK
CCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
RLKKKFGSYPSMGLSQAREIFRRDFADMIQKGRSIKIAGDTRPGTVADLFEAYVASLKAD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
GKPSWKEAEKGLNKIADSLGRNRPARDIEPDEIRDIIRPIYQRGKRSMADHVRSYIRSAY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SWGLKSEHDYRSTSVRRFRLVYNPAAGIPTEPKNVGTRWLDEEEFVRLYRWLEYPDAPVH
HCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC
PPYTRAVRILMLTGQRVEEIARLHVDQWDAAECIIDWSKTKNGKPHAIPVPKIAAELIGS
CCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHEEHHHCCCCCCCCCCHHHHHHHHHHC
IKPNEFGWFFPSATDPSKPVSHGTLYSFMWRQRDREVIPVVTNRDLRRTWKTLAGKAGLS
CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCEECEECCCHHHHHHHHHHCCCCCC
KEIRDRLQNHTLQDVSSKSYDRWNYMPEKRAAMARWDKFVRELVTKKKRKVALKEAA
HHHHHHHHHCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA