Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471062
Identifier: 13471062
GI number: 13471062
Start: 754541
End: 755047
Strand: Reverse
Name: 13471062
Synonym: mll0936
Alternate gene names: NA
Gene position: 755047-754541 (Counterclockwise)
Preceding gene: 13471065
Following gene: 13471061
Centisome position: 10.73
GC content: 60.55
Gene sequence:
>507_bases GTGTTTTGGACATGGTTCGCGGGGTTCCTCCCGAAGCGTTTTCTTGACATATTAACATGGGACATCCGACAGGGTCCAAT CTCGCTCTACCCCGGCTGCCAAGGAAACAATATGACGATTAATATTGGCGAGACTGTTTTTTTTAATGCCGCACGGTTTT GCCGCATCGGCGCGGCGATCGTCCTTGTGGGGATCGCCGGGTGCTCGAGCACGAATACCGCCGGCCCGGTGCCGATGGCC GAGAATGCAGGACCGAAGGATACCGGCACCTTCCCGAACCTCAACATCCCGCCGAAAGTGGCGAACAAGCAGCTCACGCA AGCCGAGACGAACGCCAAGCTCGCCGAACTCAAGGCTGACGGCAACGCGCAGGGCGCCAAAAGCGGCGGCGGCGCCGCGG TCGCCAACCAGGCGGCACTGGCGGACCTAGCCGCGAAACATGGTCCGCAGGCGCTGAAGCAGATCGAAGGCAAATGCGAT CCCGCCCTCGACCCTACCTGCAAATGA
Upstream 100 bases:
>100_bases TCGATCATGCGCGCCATGTTCAACGCGAAGCGCTCCGGATCCTTCACCAGATATTGCTCGACGGTCGAAGGCTCGTCATC TTCCGTTTTGCCCGAATCGG
Downstream 100 bases:
>100_bases GTATATAGCGCGCGCCCAATACCCCTTTTGCTGTCTGGAACTGCCATGGAAGAGTTTCACAAGGTCCGCCGGCTTCCGCC TTACGTGTTCGAGCAGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MFWTWFAGFLPKRFLDILTWDIRQGPISLYPGCQGNNMTINIGETVFFNAARFCRIGAAIVLVGIAGCSSTNTAGPVPMA ENAGPKDTGTFPNLNIPPKVANKQLTQAETNAKLAELKADGNAQGAKSGGGAAVANQAALADLAAKHGPQALKQIEGKCD PALDPTCK
Sequences:
>Translated_168_residues MFWTWFAGFLPKRFLDILTWDIRQGPISLYPGCQGNNMTINIGETVFFNAARFCRIGAAIVLVGIAGCSSTNTAGPVPMA ENAGPKDTGTFPNLNIPPKVANKQLTQAETNAKLAELKADGNAQGAKSGGGAAVANQAALADLAAKHGPQALKQIEGKCD PALDPTCK >Mature_168_residues MFWTWFAGFLPKRFLDILTWDIRQGPISLYPGCQGNNMTINIGETVFFNAARFCRIGAAIVLVGIAGCSSTNTAGPVPMA ENAGPKDTGTFPNLNIPPKVANKQLTQAETNAKLAELKADGNAQGAKSGGGAAVANQAALADLAAKHGPQALKQIEGKCD PALDPTCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17542; Mature: 17542
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWTWFAGFLPKRFLDILTWDIRQGPISLYPGCQGNNMTINIGETVFFNAARFCRIGAAI CCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEEHHHHHHHHHHHHH VLVGIAGCSSTNTAGPVPMAENAGPKDTGTFPNLNIPPKVANKQLTQAETNAKLAELKAD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCEEEEECC GNAQGAKSGGGAAVANQAALADLAAKHGPQALKQIEGKCDPALDPTCK CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MFWTWFAGFLPKRFLDILTWDIRQGPISLYPGCQGNNMTINIGETVFFNAARFCRIGAAI CCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCEEEHHHHHHHHHHHHH VLVGIAGCSSTNTAGPVPMAENAGPKDTGTFPNLNIPPKVANKQLTQAETNAKLAELKAD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCEEEEECC GNAQGAKSGGGAAVANQAALADLAAKHGPQALKQIEGKCDPALDPTCK CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA