Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471039
Identifier: 13471039
GI number: 13471039
Start: 731234
End: 733135
Strand: Reverse
Name: 13471039
Synonym: mll0907
Alternate gene names: NA
Gene position: 733135-731234 (Counterclockwise)
Preceding gene: 13471040
Following gene: 13471036
Centisome position: 10.42
GC content: 65.25
Gene sequence:
>1902_bases ATGAAGAAACGAGACTCGCTGGGAACCCGGCTGCGCTACGGCTTCGACAAGAGCATGGCCGCCGGCCCGATCGCGCTGAT CGGCTGGCTTGCCGTCGTTTCCCTGCTGATCATCATCGCCGCCGCCGCTTTCCTTGCGGTGACCCGCATCGCGCCGGAAG GCGGCGAGCCGCTGAATTTCTTCGAAGCGTTCTGGGAATCGCTGATGCGCACGCTCGATTCCGGGACGATGGGCGGTGAC ACCGGCTGGGCCTTCCGCCTCGTCATGCTGGTCGTCACGCTTGCCGGCATCTTCGTCGTGTCCGCCCTCATCGGCGTGCT CAGCGCCGGCGTCGACGGCAAGCTCGATGAATTGCGCAAGGGCCGTTCTCGGGTGCTGGAGAGCGACCACACAATCATCC TCAACTGGTCGCCGTCGATCTTCGACGTGATTTCCGAACTCGTCATCGCCAATGCCAGCCGCCGCCGTCCGCGCATCGTC GTCATGGCCAATATGGACAAGGTCGCGATGGAGGACGAGATCGCGGCCAAGGTCGGCAAACTGGGCAACACGCGCATCAT CTGCCGCAGCGGCGATCCGACCGATCTCTATGATCTCGCCATCGTCAACCCGCAGACCTCGCGGTCGGTCATCGTGCTGT CGCCGGACGGCGACGATCCGGATTCGCAGGTCATCAAGACGGTGCTGGCGCTGGTCAACGACCCGAGCCGGCGCACCGAC CCCTATAACATCGCCGCCGAGATCCGCGACGGCAAGAATGCCGAGGTCGCCCGCGTCGTCGGCGGGGCCGAGGTGCAGCT CGTGCTGGCCGATCAGCTGATCTCGCGCATCGTCGTGCATTCGAGCCGGCAGTCGGGCCTCAGCGGCGTCTATTCGGAAC TGCTCGATTTCGATGGCTGCGAGATCTACACGACCACGCAGCCGGAGCTCGCCGGCAAGACTTTCGGCGAGGCGGTGATG GCCTATGAGCATTGCGCGCTGATCGGGCTCTGCGACCAGGGGGGACGCGTCAATCTCAACCCGCCGTCGGAGCTGGTGAT CGGCAAGGACATGCGCGCCATCATCATCGCCGAGGACGATGCCGCGATCAGGCCCGGAAGCGCCGGGATCAAGATCGACA CGGCGGCGATCCGCGACCCGCGGCCCGTCGAGGCGAAGCCGGAGCGCACGCTGATCCTCGGCTGGAACCGGCGCGGTCCG ATCATCACCTATGAACTGTCGCGCTACGTCGCGCCTGGTTCGATCCTGACCATCGCCGCCGATACGCCTGGCCTCGAGCA GGAAGTTGCCGGACTGCCGGTCGCTGGCGACAATCTGTCGGTTTCCTGCCGCATCACCGACACGTCGAGCAGCACGGCGC TTTCAAGCCTGGACGTGCCTTCCTACGACCACGTGCTGGTCCTCGGCTACAGCGAAACCATGGCCGCGCAGCCGGCCGAC ACGCGCACGCTGGTGACGCTGCTGCATCTGCGCAAGATCGCCGACGATGCCGGCCTGCACATCTCCATCGTCAGCGAGAT GATCGACGTGCGCAACCGCGAGCTTGCGGCGGTGACCAAGGCCGATGATTTCGTCGTCAGCAACCGGCTGGTCAGCCTGA TGCTGGCGCAGGCGTCCGAGAACCAGTATCTCGCCGCGATCTTCGATGATTTGCTCGACGAGCAGGGCTCCGAAATCTAC ATGCGCCCAGTCGCCGACTATGTCGCCATCGACCAGCCCTTGACCTTCTGGACGATCGCGGAGTCGGCGCGGCTGCGCGG CGAGATCGCCATTGGCTATCGACGCATCCGCGCCGGAGACGCCGACCAGCGGGCTCTGGGCGGCGTCACCGTCAATCCGC TGAAGTCGGAAGCGCTGACCTATCTGCCGGAGGACCGGATTATCGTCCTGGCGCGGGACTGA
Upstream 100 bases:
>100_bases AAGCGATTCCCCTTCCTCTGAACACACGCTAAGAGAGCGGCTTCGGCGATGCGTTGGGTTGACGCATCGACCTTGGGGAT AGTGCGGGGGCACCACTGGC
Downstream 100 bases:
>100_bases CGAGCAAAGGCTCGGCAGACTAAGCGGAGATTCCGGCTGCCTTGGCGCGTGCCAGCAGCCGTTCGGCCAGCCGCAGATGG GGGCGGTCGAACATCTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; TrkA Domain-Containing Protein; TrkA-N Domain-Containing Protein
Number of amino acids: Translated: 633; Mature: 633
Protein sequence:
>633_residues MKKRDSLGTRLRYGFDKSMAAGPIALIGWLAVVSLLIIIAAAAFLAVTRIAPEGGEPLNFFEAFWESLMRTLDSGTMGGD TGWAFRLVMLVVTLAGIFVVSALIGVLSAGVDGKLDELRKGRSRVLESDHTIILNWSPSIFDVISELVIANASRRRPRIV VMANMDKVAMEDEIAAKVGKLGNTRIICRSGDPTDLYDLAIVNPQTSRSVIVLSPDGDDPDSQVIKTVLALVNDPSRRTD PYNIAAEIRDGKNAEVARVVGGAEVQLVLADQLISRIVVHSSRQSGLSGVYSELLDFDGCEIYTTTQPELAGKTFGEAVM AYEHCALIGLCDQGGRVNLNPPSELVIGKDMRAIIIAEDDAAIRPGSAGIKIDTAAIRDPRPVEAKPERTLILGWNRRGP IITYELSRYVAPGSILTIAADTPGLEQEVAGLPVAGDNLSVSCRITDTSSSTALSSLDVPSYDHVLVLGYSETMAAQPAD TRTLVTLLHLRKIADDAGLHISIVSEMIDVRNRELAAVTKADDFVVSNRLVSLMLAQASENQYLAAIFDDLLDEQGSEIY MRPVADYVAIDQPLTFWTIAESARLRGEIAIGYRRIRAGDADQRALGGVTVNPLKSEALTYLPEDRIIVLARD
Sequences:
>Translated_633_residues MKKRDSLGTRLRYGFDKSMAAGPIALIGWLAVVSLLIIIAAAAFLAVTRIAPEGGEPLNFFEAFWESLMRTLDSGTMGGD TGWAFRLVMLVVTLAGIFVVSALIGVLSAGVDGKLDELRKGRSRVLESDHTIILNWSPSIFDVISELVIANASRRRPRIV VMANMDKVAMEDEIAAKVGKLGNTRIICRSGDPTDLYDLAIVNPQTSRSVIVLSPDGDDPDSQVIKTVLALVNDPSRRTD PYNIAAEIRDGKNAEVARVVGGAEVQLVLADQLISRIVVHSSRQSGLSGVYSELLDFDGCEIYTTTQPELAGKTFGEAVM AYEHCALIGLCDQGGRVNLNPPSELVIGKDMRAIIIAEDDAAIRPGSAGIKIDTAAIRDPRPVEAKPERTLILGWNRRGP IITYELSRYVAPGSILTIAADTPGLEQEVAGLPVAGDNLSVSCRITDTSSSTALSSLDVPSYDHVLVLGYSETMAAQPAD TRTLVTLLHLRKIADDAGLHISIVSEMIDVRNRELAAVTKADDFVVSNRLVSLMLAQASENQYLAAIFDDLLDEQGSEIY MRPVADYVAIDQPLTFWTIAESARLRGEIAIGYRRIRAGDADQRALGGVTVNPLKSEALTYLPEDRIIVLARD >Mature_633_residues MKKRDSLGTRLRYGFDKSMAAGPIALIGWLAVVSLLIIIAAAAFLAVTRIAPEGGEPLNFFEAFWESLMRTLDSGTMGGD TGWAFRLVMLVVTLAGIFVVSALIGVLSAGVDGKLDELRKGRSRVLESDHTIILNWSPSIFDVISELVIANASRRRPRIV VMANMDKVAMEDEIAAKVGKLGNTRIICRSGDPTDLYDLAIVNPQTSRSVIVLSPDGDDPDSQVIKTVLALVNDPSRRTD PYNIAAEIRDGKNAEVARVVGGAEVQLVLADQLISRIVVHSSRQSGLSGVYSELLDFDGCEIYTTTQPELAGKTFGEAVM AYEHCALIGLCDQGGRVNLNPPSELVIGKDMRAIIIAEDDAAIRPGSAGIKIDTAAIRDPRPVEAKPERTLILGWNRRGP IITYELSRYVAPGSILTIAADTPGLEQEVAGLPVAGDNLSVSCRITDTSSSTALSSLDVPSYDHVLVLGYSETMAAQPAD TRTLVTLLHLRKIADDAGLHISIVSEMIDVRNRELAAVTKADDFVVSNRLVSLMLAQASENQYLAAIFDDLLDEQGSEIY MRPVADYVAIDQPLTFWTIAESARLRGEIAIGYRRIRAGDADQRALGGVTVNPLKSEALTYLPEDRIIVLARD
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68378; Mature: 68378
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRDSLGTRLRYGFDKSMAAGPIALIGWLAVVSLLIIIAAAAFLAVTRIAPEGGEPLNF CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH FEAFWESLMRTLDSGTMGGDTGWAFRLVMLVVTLAGIFVVSALIGVLSAGVDGKLDELRK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GRSRVLESDHTIILNWSPSIFDVISELVIANASRRRPRIVVMANMDKVAMEDEIAAKVGK HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCC LGNTRIICRSGDPTDLYDLAIVNPQTSRSVIVLSPDGDDPDSQVIKTVLALVNDPSRRTD CCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PYNIAAEIRDGKNAEVARVVGGAEVQLVLADQLISRIVVHSSRQSGLSGVYSELLDFDGC CCEEEEEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCC EIYTTTQPELAGKTFGEAVMAYEHCALIGLCDQGGRVNLNPPSELVIGKDMRAIIIAEDD EEEECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCEEECCCCEEEEEECCC AAIRPGSAGIKIDTAAIRDPRPVEAKPERTLILGWNRRGPIITYELSRYVAPGSILTIAA CCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCCCCEEEEEE DTPGLEQEVAGLPVAGDNLSVSCRITDTSSSTALSSLDVPSYDHVLVLGYSETMAAQPAD CCCCCHHHHCCCCEECCCEEEEEEEECCCCCCCHHCCCCCCCCCEEEEECCHHHCCCCCC TRTLVTLLHLRKIADDAGLHISIVSEMIDVRNRELAAVTKADDFVVSNRLVSLMLAQASE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCC NQYLAAIFDDLLDEQGSEIYMRPVADYVAIDQPLTFWTIAESARLRGEIAIGYRRIRAGD CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEEEHHHHHCCEEEEEEEEEECCC ADQRALGGVTVNPLKSEALTYLPEDRIIVLARD CCHHHHCCEEECCCHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MKKRDSLGTRLRYGFDKSMAAGPIALIGWLAVVSLLIIIAAAAFLAVTRIAPEGGEPLNF CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH FEAFWESLMRTLDSGTMGGDTGWAFRLVMLVVTLAGIFVVSALIGVLSAGVDGKLDELRK HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GRSRVLESDHTIILNWSPSIFDVISELVIANASRRRPRIVVMANMDKVAMEDEIAAKVGK HHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHCC LGNTRIICRSGDPTDLYDLAIVNPQTSRSVIVLSPDGDDPDSQVIKTVLALVNDPSRRTD CCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PYNIAAEIRDGKNAEVARVVGGAEVQLVLADQLISRIVVHSSRQSGLSGVYSELLDFDGC CCEEEEEECCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHCCHHCCHHHHHHHHHCCCCC EIYTTTQPELAGKTFGEAVMAYEHCALIGLCDQGGRVNLNPPSELVIGKDMRAIIIAEDD EEEECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCEEECCCCCCEEECCCCEEEEEECCC AAIRPGSAGIKIDTAAIRDPRPVEAKPERTLILGWNRRGPIITYELSRYVAPGSILTIAA CCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEHHHCCCCCCEEEEEE DTPGLEQEVAGLPVAGDNLSVSCRITDTSSSTALSSLDVPSYDHVLVLGYSETMAAQPAD CCCCCHHHHCCCCEECCCEEEEEEEECCCCCCCHHCCCCCCCCCEEEEECCHHHCCCCCC TRTLVTLLHLRKIADDAGLHISIVSEMIDVRNRELAAVTKADDFVVSNRLVSLMLAQASE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCC NQYLAAIFDDLLDEQGSEIYMRPVADYVAIDQPLTFWTIAESARLRGEIAIGYRRIRAGD CCCHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEEEHHHHHCCEEEEEEEEEECCC ADQRALGGVTVNPLKSEALTYLPEDRIIVLARD CCHHHHCCEEECCCHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA