Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13471006
Identifier: 13471006
GI number: 13471006
Start: 689256
End: 690923
Strand: Reverse
Name: 13471006
Synonym: mll0865
Alternate gene names: NA
Gene position: 690923-689256 (Counterclockwise)
Preceding gene: 13471008
Following gene: 13471003
Centisome position: 9.82
GC content: 61.63
Gene sequence:
>1668_bases GTGATGGTATTTGCCTACCAGAAGTATGAAACGATTTTTGCCTTTTCGATCCAACGGAGACTTCCCGTGAACCGTATGTT GCCAGTTGCCTTTACCGCGCTTCTGTTCAGCGCGCCCGCTTTCGGCCAGGCCGTCGACAGCCAGGGCGCCAAGCAATTGT CCGATGACCTGTCACGCTATGTCGGCAAACAGGCGTTCGACAAGGGCATTCTGAAGGTTTCGGTCGAAGGCGGCGCCTAC AAGATCGCGTTCGATGTCAAGGCGCTTGCCGCGACGTTTCCCGAGCAGGGAAAGGTGAAACTCGACTTCGCTCCCTACGC CCTGCTGGTGAAGCCGCGCAGCGACGGGACCTGGGATGTCTCGATAGATTTTTCGCAAAGCGGATCCTTCGAGTTCACCG GGCCCGAGGGGCTGCAAAGCACACAGTTTTCGATCAAGGACGGCAAGGGTTCCGGCGTCTACGATCCCAATCTGGCGGCC TTCATCAGCGGCACCAGTTCGCTGGCCGGCATGACGATGGCATCGAAGGACGCCAAGCAGCAGATGGAGGCCAGCACTGG CGCCGGCACCGCGACCATCGCCGCCACCAAGGCTGCCAATGGCGGCGTCGATTTCACGATGTCGCAGAAGATTTCGAATT TCGTCGAGGCGATCAAACTGGACGATCCCGAGAACGGGCTGAATTTTCCGGTCACCATCAAGTCGCCGGAACTGTCGGTG GAAGCCAGCGGCAAGGGCGTGCAGACAAGGCCGCTGCTCGACCTCCTGGCATTTGCCGTGGCCAATGAGGACGAGAAGAC GCTGGAGGCCAACCAGGCGCAGCTCAAGTCGCTTCTACGCGCTGCGCTGCCGGTGTGGGAGCGCATCGACGGCACCTATG GCTTCAAGGATTTCGCGGTCGACAGCCCGATCGGTACTTTCGGGGCAACCCAGCTCAGCACCGTGTTCGGCAGCGACGGC GTTTCCCAGAGCGGCAAGGTCACCTACGGCATCAAAGCGTCGGGGCTGACCGTGCCGCAGCAGCTTTTGCCGAGCTGGAG CGTGGCGTTGCTGCCCACCGATATCGACCTGAACTTCGGTGGTGCCAATATCGATCTCGACAGCATGGCGAAGAAGGCGA TCGAAGCCTTTGATCTCAATCAGGATCCGCCGCTGTCGGCCGAGTTCGGCGACCAGCTCAAAGCCGACTTTCTCGCCAAG GCGCCGAAGGTCATGATCGGCCACAGCGTTGTGAAGAACAAGGACATGGAGATCGCGCTGGAAGGCGAGATGACGAGCTT CGGCCAGAAACCCGATGCAAATCTCACCGTCGATGTCGCCGGCTTCGACAAGATCATGGCACATCTGCAGGAAGCGGCAA AGGCGGAGCCGGAGGTCGGGCAGTATGTGCCTGTCGCCCTCATGGCCAAGGGTTTTGCCAAGACGCTGCCGGACGGCCGG CTGGAATGGGCCGTCAGCACCAAGGCCGACGGCTCGGTCACCGTCAACGGCGTCATGCTGAAGCCCGCCGATCCGGCGGT GGACGACGGCGGCGATGGCGGTGACGGCGGTGACGGCGCGGACGACAGCAGCGGCGGTGACAATGGCGGCGGCGCCAATA GTGGCGGTGGCGACGCCAATGGTGGTAGCAGCGACAATGGCGGAGCCGGTGCGAAGCTGAACCCTTGA
Upstream 100 bases:
>100_bases GAGAAGGCCGGGTTCGAGAGGCTGGTGGAACGCAAGGCTGGCCGGCCGCTTATGCGGCTGGTGCTGAAGCCGATTGCCTG ACTGTCATCATCTTGCAGTT
Downstream 100 bases:
>100_bases GGGTTCGGCTTTCCAGCAATTCAGGGAAAAGCGCATGGCGATTTTCCCTGAATTGCGTCTAACGTTTAGAGTCCCAGCGC TCCGACGATCTTCGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MMVFAYQKYETIFAFSIQRRLPVNRMLPVAFTALLFSAPAFGQAVDSQGAKQLSDDLSRYVGKQAFDKGILKVSVEGGAY KIAFDVKALAATFPEQGKVKLDFAPYALLVKPRSDGTWDVSIDFSQSGSFEFTGPEGLQSTQFSIKDGKGSGVYDPNLAA FISGTSSLAGMTMASKDAKQQMEASTGAGTATIAATKAANGGVDFTMSQKISNFVEAIKLDDPENGLNFPVTIKSPELSV EASGKGVQTRPLLDLLAFAVANEDEKTLEANQAQLKSLLRAALPVWERIDGTYGFKDFAVDSPIGTFGATQLSTVFGSDG VSQSGKVTYGIKASGLTVPQQLLPSWSVALLPTDIDLNFGGANIDLDSMAKKAIEAFDLNQDPPLSAEFGDQLKADFLAK APKVMIGHSVVKNKDMEIALEGEMTSFGQKPDANLTVDVAGFDKIMAHLQEAAKAEPEVGQYVPVALMAKGFAKTLPDGR LEWAVSTKADGSVTVNGVMLKPADPAVDDGGDGGDGGDGADDSSGGDNGGGANSGGGDANGGSSDNGGAGAKLNP
Sequences:
>Translated_555_residues MMVFAYQKYETIFAFSIQRRLPVNRMLPVAFTALLFSAPAFGQAVDSQGAKQLSDDLSRYVGKQAFDKGILKVSVEGGAY KIAFDVKALAATFPEQGKVKLDFAPYALLVKPRSDGTWDVSIDFSQSGSFEFTGPEGLQSTQFSIKDGKGSGVYDPNLAA FISGTSSLAGMTMASKDAKQQMEASTGAGTATIAATKAANGGVDFTMSQKISNFVEAIKLDDPENGLNFPVTIKSPELSV EASGKGVQTRPLLDLLAFAVANEDEKTLEANQAQLKSLLRAALPVWERIDGTYGFKDFAVDSPIGTFGATQLSTVFGSDG VSQSGKVTYGIKASGLTVPQQLLPSWSVALLPTDIDLNFGGANIDLDSMAKKAIEAFDLNQDPPLSAEFGDQLKADFLAK APKVMIGHSVVKNKDMEIALEGEMTSFGQKPDANLTVDVAGFDKIMAHLQEAAKAEPEVGQYVPVALMAKGFAKTLPDGR LEWAVSTKADGSVTVNGVMLKPADPAVDDGGDGGDGGDGADDSSGGDNGGGANSGGGDANGGSSDNGGAGAKLNP >Mature_555_residues MMVFAYQKYETIFAFSIQRRLPVNRMLPVAFTALLFSAPAFGQAVDSQGAKQLSDDLSRYVGKQAFDKGILKVSVEGGAY KIAFDVKALAATFPEQGKVKLDFAPYALLVKPRSDGTWDVSIDFSQSGSFEFTGPEGLQSTQFSIKDGKGSGVYDPNLAA FISGTSSLAGMTMASKDAKQQMEASTGAGTATIAATKAANGGVDFTMSQKISNFVEAIKLDDPENGLNFPVTIKSPELSV EASGKGVQTRPLLDLLAFAVANEDEKTLEANQAQLKSLLRAALPVWERIDGTYGFKDFAVDSPIGTFGATQLSTVFGSDG VSQSGKVTYGIKASGLTVPQQLLPSWSVALLPTDIDLNFGGANIDLDSMAKKAIEAFDLNQDPPLSAEFGDQLKADFLAK APKVMIGHSVVKNKDMEIALEGEMTSFGQKPDANLTVDVAGFDKIMAHLQEAAKAEPEVGQYVPVALMAKGFAKTLPDGR LEWAVSTKADGSVTVNGVMLKPADPAVDDGGDGGDGGDGADDSSGGDNGGGANSGGGDANGGSSDNGGAGAKLNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57802; Mature: 57802
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVFAYQKYETIFAFSIQRRLPVNRMLPVAFTALLFSAPAFGQAVDSQGAKQLSDDLSRY CEEEEEECCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH VGKQAFDKGILKVSVEGGAYKIAFDVKALAATFPEQGKVKLDFAPYALLVKPRSDGTWDV HHHHHHCCCEEEEEECCCEEEEEEEHHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEE SIDFSQSGSFEFTGPEGLQSTQFSIKDGKGSGVYDPNLAAFISGTSSLAGMTMASKDAKQ EEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHH QMEASTGAGTATIAATKAANGGVDFTMSQKISNFVEAIKLDDPENGLNFPVTIKSPELSV HHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHEECCCCCCCCCCCEEECCCCEEE EASGKGVQTRPLLDLLAFAVANEDEKTLEANQAQLKSLLRAALPVWERIDGTYGFKDFAV EECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC DSPIGTFGATQLSTVFGSDGVSQSGKVTYGIKASGLTVPQQLLPSWSVALLPTDIDLNFG CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEECC GANIDLDSMAKKAIEAFDLNQDPPLSAEFGDQLKADFLAKAPKVMIGHSVVKNKDMEIAL CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEECHHHHCCCCCEEEE EGEMTSFGQKPDANLTVDVAGFDKIMAHLQEAAKAEPEVGQYVPVALMAKGFAKTLPDGR ECCHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC LEWAVSTKADGSVTVNGVMLKPADPAVDDGGDGGDGGDGADDSSGGDNGGGANSGGGDAN EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSSDNGGAGAKLNP CCCCCCCCCCCCCCC >Mature Secondary Structure MMVFAYQKYETIFAFSIQRRLPVNRMLPVAFTALLFSAPAFGQAVDSQGAKQLSDDLSRY CEEEEEECCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH VGKQAFDKGILKVSVEGGAYKIAFDVKALAATFPEQGKVKLDFAPYALLVKPRSDGTWDV HHHHHHCCCEEEEEECCCEEEEEEEHHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEE SIDFSQSGSFEFTGPEGLQSTQFSIKDGKGSGVYDPNLAAFISGTSSLAGMTMASKDAKQ EEEECCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHH QMEASTGAGTATIAATKAANGGVDFTMSQKISNFVEAIKLDDPENGLNFPVTIKSPELSV HHHHCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHEECCCCCCCCCCCEEECCCCEEE EASGKGVQTRPLLDLLAFAVANEDEKTLEANQAQLKSLLRAALPVWERIDGTYGFKDFAV EECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC DSPIGTFGATQLSTVFGSDGVSQSGKVTYGIKASGLTVPQQLLPSWSVALLPTDIDLNFG CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEEEEEEEEECC GANIDLDSMAKKAIEAFDLNQDPPLSAEFGDQLKADFLAKAPKVMIGHSVVKNKDMEIAL CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHEECHHHHCCCCCEEEE EGEMTSFGQKPDANLTVDVAGFDKIMAHLQEAAKAEPEVGQYVPVALMAKGFAKTLPDGR ECCHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC LEWAVSTKADGSVTVNGVMLKPADPAVDDGGDGGDGGDGADDSSGGDNGGGANSGGGDAN EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSSDNGGAGAKLNP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA