Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is nadE [H]
Identifier: 13470971
GI number: 13470971
Start: 648643
End: 650319
Strand: Reverse
Name: nadE [H]
Synonym: mll0818
Alternate gene names: 13470971
Gene position: 650319-648643 (Counterclockwise)
Preceding gene: 13470972
Following gene: 13470970
Centisome position: 9.24
GC content: 62.49
Gene sequence:
>1677_bases ATGACCAAGAAGCCCGACATACTGCGCATCGCGATCGCCCAGCTCAATCCGACCGTCGGCGATGTCGCCGGCAATCTCGC CAAGGCCCGCGAGGCGAGGGCGGATGCCGCGCGCCAGGGCGCCGATCTCGTGCTCTACACCGAGCTTTTCCTTGCCGGTT ACCCACCTGAAGATCTGGTGCTGAAGCCGGCCTTCCTGAAGGCTTGCGAAAAGGCGGCGCAGGAGTTTGCCGCCGATACA TCGGATGGCGGCCCCGGCGTGATCATCGGCACGCCGCTGAAGCGCAAGAGCGGCACGCACAATTCGATCATCGTCGCTGA TGGCGGCAAGATCATCGCCGAACGCTACAAGCTCGACCTGCCGAATTATGGCGAGTTCGACGAGAAGCGCGTGTTCCAGG CTGGACCCGAGATCCAGGGACCTGTCAATTTCCGTGGCGTGCGCATCGGAATTCCGATTTGCGAGGACATCTGGGGCGAT GTCGGCATCTGCGAATCGCTGGCGGAAAGCGGGGCGGAAATCCTGCTGGTGCCGAACGGCTCGCCTTACTATCGCGCCAA AATCGATGTCCGCTACCAGGTCGTCATTCGCCAGATCATCGAATGCGGGCTGCCGATCACCTATGCCAATCAGCTTGGCG GCCAGGATGAGCTGATCTTCGACGGCGCGTCGTTTGCCATCGGCGCCGACAAGACATTGGCTTTCCAGATGAGTCAGTTC GAGGAAGCGGTCGACGTCGTCACATGGAAGCGCGGGGAGGACGGCTGGGTCTGTTCGGAAGGGCCGATGTCGAAGATCCC GGAGCGGGAGGAGGCCGACTATCGCGCCTGCATGCTGGGCCTGCGCGACTACGTCAACAAGAACGGCTTCAAGAATGTGG TGCTCGGCCTGTCCGGCGGCATCGATTCGGCGATCTGTGCCGCCCTTGCCGTCGACGCGCTCGGCGAAGAGCGGCTGCGC GCGGTGATGATGCCCTATCGCTACACCTCGAAGGATTCGCTCAAGGACGCCGAGGATTGCGCCCGGGCGCTCGGCTGCCG CTATGACATCGTGCCGATCTTCGAGCCGGTCGAAGGTTTCCTGCATGCGCTGACGCAGCTCTTCGAGGGCACCAAGGAAG GCATCACCGAGGAAAACCTGCAGAGCCGCGCGCGCGGCACCATCCTGATGGCGATCTCCAACAAGTTCGGCTCGATGGTG GTTACGACAGGCAACAAGAGCGAAATGTCGGTTGGCTATGCGACGCTCTATGGCGACATGAATGGCGGCTTCAACCCGAT CAAGGATCTCTACAAGATGCAGGTCTACGCGCTGTCGCGCTGGCGCAACAGCCATGTGCCGCCGGGCGCGCTCGGACCCT CGGGCGAGGTCATTCCGAAGAACATCATCGACAAGGCGCCGTCGGCGGAATTGCGCGAGAACCAGACGGACCAGGATTCG CTGCCGCCCTATCCGGTGCTGGACGACATCCTCGAATGCCTGGTCGAGAACGAGATGGGCGTCGACGACATTGTCGCGCG CGGCCATGACCGGGCGACGGTGACGCGCATCGAACACCTGCTCTACATCGCCGAATACAAGCGCCGGCAGGCGGCACCAG GGGTGAAGATCACCCGGAAGAATTTCGGCCGCGACCGCCGCTATCCCATCACCAACCGCTTCAGGGATCGTGGGTAA
Upstream 100 bases:
>100_bases TCCCAACACGACTGATGACGAATGACGTCTGTCATTCGGTCGGAGTTGGTCCAAGCGAACGCCATTGCGAGGCGAATTTT GCCGCGCTAAGTCAGCAGGC
Downstream 100 bases:
>100_bases GCGCGTTCGTCCGCTGGGCGAAAATACGCGGTGCCGCGGGGCGAGGATACAGCATGCCGGACTGTGAGATCAGCTTCGAC CTCGCGCGGATCGACTTTCG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MTKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLVLKPAFLKACEKAAQEFAADT SDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDLPNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGD VGICESLAESGAEILLVPNGSPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF EEAVDVVTWKRGEDGWVCSEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVVLGLSGGIDSAICAALAVDALGEERLR AVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMV VTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQDS LPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRKNFGRDRRYPITNRFRDRG
Sequences:
>Translated_558_residues MTKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLVLKPAFLKACEKAAQEFAADT SDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDLPNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGD VGICESLAESGAEILLVPNGSPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF EEAVDVVTWKRGEDGWVCSEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVVLGLSGGIDSAICAALAVDALGEERLR AVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMV VTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQDS LPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRKNFGRDRRYPITNRFRDRG >Mature_557_residues TKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLVLKPAFLKACEKAAQEFAADTS DGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDLPNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDV GICESLAESGAEILLVPNGSPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQFE EAVDVVTWKRGEDGWVCSEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVVLGLSGGIDSAICAALAVDALGEERLRA VMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVEGFLHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVV TTGNKSEMSVGYATLYGDMNGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQDSL PPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRKNFGRDRRYPITNRFRDRG
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321865, Length=627, Percent_Identity=23.6044657097289, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 61314; Mature: 61182
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV CCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHCE LKPAFLKACEKAAQEFAADTSDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDL ECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEHHHCCCC PNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVGICESLAESGAEILLVPNG CCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCEEEEEECC SPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF CCEEEEEECHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEECCCCEEECCCCHHHHHHHHH EEAVDVVTWKRGEDGWVCSEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVVLGLSGG HHHHHHHEEECCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCC IDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVEGF HHHHHHHHHHHHHHCHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHH LHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM HHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEECC NGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQDS CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCC LPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRK CCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH NFGRDRRYPITNRFRDRG HCCCCCCCCCHHHHCCCC >Mature Secondary Structure TKKPDILRIAIAQLNPTVGDVAGNLAKAREARADAARQGADLVLYTELFLAGYPPEDLV CCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCHHCE LKPAFLKACEKAAQEFAADTSDGGPGVIIGTPLKRKSGTHNSIIVADGGKIIAERYKLDL ECHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCEEEHHHCCCC PNYGEFDEKRVFQAGPEIQGPVNFRGVRIGIPICEDIWGDVGICESLAESGAEILLVPNG CCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHCCCEEEEEECC SPYYRAKIDVRYQVVIRQIIECGLPITYANQLGGQDELIFDGASFAIGADKTLAFQMSQF CCEEEEEECHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEECCCCEEECCCCHHHHHHHHH EEAVDVVTWKRGEDGWVCSEGPMSKIPEREEADYRACMLGLRDYVNKNGFKNVVLGLSGG HHHHHHHEEECCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCC IDSAICAALAVDALGEERLRAVMMPYRYTSKDSLKDAEDCARALGCRYDIVPIFEPVEGF HHHHHHHHHHHHHHCHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHH LHALTQLFEGTKEGITEENLQSRARGTILMAISNKFGSMVVTTGNKSEMSVGYATLYGDM HHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEEEEEEEECC NGGFNPIKDLYKMQVYALSRWRNSHVPPGALGPSGEVIPKNIIDKAPSAELRENQTDQDS CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCCCCC LPPYPVLDDILECLVENEMGVDDIVARGHDRATVTRIEHLLYIAEYKRRQAAPGVKITRK CCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH NFGRDRRYPITNRFRDRG HCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]