Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470966
Identifier: 13470966
GI number: 13470966
Start: 641929
End: 643131
Strand: Direct
Name: 13470966
Synonym: mlr0812
Alternate gene names: NA
Gene position: 641929-643131 (Clockwise)
Preceding gene: 13470965
Following gene: 13470973
Centisome position: 9.12
GC content: 65.42
Gene sequence:
>1203_bases ATGACAAGCGGAGGGTTGAAGCGGGCGCATGCTGCCATGCTGCTTGGCCTGCTGCTGTCCGGCGCCACCATCACCGAACC ACAGGCGGCGTCGCGGGTTTGCCGTCAGTTGGAGGCCGATCTTGCTGCGGCTTCGCGTGGCGGCGGTGGTGGTCCGGCAA TGATCCGCAAATACGATGCCGCGATCGATCGGCAGCGCGAACAAATCTCCAAGGCCCGCGACCAAGCGGACAGTGCCGGT TGCGGGTTTTCGCTGTTTTCCCGCAACATCAATCGATGCGCCGGGCTCAACGCCACCATCGACCGCATGAACGCCAATCT CGACAGTCTCCAGGCTAAGCGTGCCCAACTCGCCGGTGGCGGCGGCTCGCGTCGCGACCGTGGCCGCATCCTGGCCGCGC TTGACGCCAATGGCTGCCGCGACGACACGGTTGCGCCGCGCCGTGCGCCGCTGCAGGAAGCCGACCGTGGAGAACAAGAC GGCAAGGCCGACCTGTTCGACCAGCTTTTCGGCAATCAGCAGAGCGATACGCTTGACCAGCCGGACGATCCCAGCGAGGA ACGCAATGTCCGCGGCGTCCTGAACCTGCCCGGCATTCCGGACGTTCCGGGCACCGGCGGCGAGTTCCACACCACATGCG TGCGCACCTGCGACGGTTATTTCTTCCCGATGTCGAATGCCGCCTCGGTCGGCGACTTCGAGCGCGACCAGAAGAATTGC GAATCGAGCTGCCCCGGCACCGAGATGCAGGTCTTCTATTCGCGCGGCATGGATGACGATTCGGCTTCGATGACGTCATC GGTCACCGGCAGGCCCTACAGCGAGTTGCCGACCGCCTATCTCTACAAGCAGTCCAACATGTCGCGGCCGCCGGCCTGCG GCTGCAATGCCGCGCAGAATTTTCAGATCATCGGCGGCAACCCTCCGCCTCCGCAACAGTCGCTGCCGGAAACGGAGGCG GCACCGTTGGTTCCCGTGCCGGCCTCCAAGCCCGATCCGGGCGCCGACCCGGAGACCCTGGCCAACAGGGAGGGCGGGCT CGACCGCGAGGCTGTCAAACGGCTTTCCGCCAAGCCGGTGACGTCGCCCGTATCCGCACTACCGCCGGAGCAGCGCAAGG TCAGGGTCGTCGGGCCAACGTTCCTTCCCGACCCATCAGCGGCAATAAATCTGCAAGCTCCGGCCCCGAAGGCAGTCCAG TAA
Upstream 100 bases:
>100_bases CGATCCAAGGCTTTCGGCCGAGTACCGGACCGCATCCGAAATAGACGATTAACCGGCAACGGGGTAGTTTGGCGAGCACA AGCCAGCGGGATTGAGGCGG
Downstream 100 bases:
>100_bases GGGCAAGCCTCAGCGGCATGAACAGCCCCTTGCCCTTGCGCCCGGTCGCTTCCCTGATCTTGCCGGTCCAGTCCTTCCAG ACGGTTCCGTTCCAGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTSGGLKRAHAAMLLGLLLSGATITEPQAASRVCRQLEADLAAASRGGGGGPAMIRKYDAAIDRQREQISKARDQADSAG CGFSLFSRNINRCAGLNATIDRMNANLDSLQAKRAQLAGGGGSRRDRGRILAALDANGCRDDTVAPRRAPLQEADRGEQD GKADLFDQLFGNQQSDTLDQPDDPSEERNVRGVLNLPGIPDVPGTGGEFHTTCVRTCDGYFFPMSNAASVGDFERDQKNC ESSCPGTEMQVFYSRGMDDDSASMTSSVTGRPYSELPTAYLYKQSNMSRPPACGCNAAQNFQIIGGNPPPPQQSLPETEA APLVPVPASKPDPGADPETLANREGGLDREAVKRLSAKPVTSPVSALPPEQRKVRVVGPTFLPDPSAAINLQAPAPKAVQ
Sequences:
>Translated_400_residues MTSGGLKRAHAAMLLGLLLSGATITEPQAASRVCRQLEADLAAASRGGGGGPAMIRKYDAAIDRQREQISKARDQADSAG CGFSLFSRNINRCAGLNATIDRMNANLDSLQAKRAQLAGGGGSRRDRGRILAALDANGCRDDTVAPRRAPLQEADRGEQD GKADLFDQLFGNQQSDTLDQPDDPSEERNVRGVLNLPGIPDVPGTGGEFHTTCVRTCDGYFFPMSNAASVGDFERDQKNC ESSCPGTEMQVFYSRGMDDDSASMTSSVTGRPYSELPTAYLYKQSNMSRPPACGCNAAQNFQIIGGNPPPPQQSLPETEA APLVPVPASKPDPGADPETLANREGGLDREAVKRLSAKPVTSPVSALPPEQRKVRVVGPTFLPDPSAAINLQAPAPKAVQ >Mature_399_residues TSGGLKRAHAAMLLGLLLSGATITEPQAASRVCRQLEADLAAASRGGGGGPAMIRKYDAAIDRQREQISKARDQADSAGC GFSLFSRNINRCAGLNATIDRMNANLDSLQAKRAQLAGGGGSRRDRGRILAALDANGCRDDTVAPRRAPLQEADRGEQDG KADLFDQLFGNQQSDTLDQPDDPSEERNVRGVLNLPGIPDVPGTGGEFHTTCVRTCDGYFFPMSNAASVGDFERDQKNCE SSCPGTEMQVFYSRGMDDDSASMTSSVTGRPYSELPTAYLYKQSNMSRPPACGCNAAQNFQIIGGNPPPPQQSLPETEAA PLVPVPASKPDPGADPETLANREGGLDREAVKRLSAKPVTSPVSALPPEQRKVRVVGPTFLPDPSAAINLQAPAPKAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42322; Mature: 42190
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGGLKRAHAAMLLGLLLSGATITEPQAASRVCRQLEADLAAASRGGGGGPAMIRKYDA CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIDRQREQISKARDQADSAGCGFSLFSRNINRCAGLNATIDRMNANLDSLQAKRAQLAGG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCC GGSRRDRGRILAALDANGCRDDTVAPRRAPLQEADRGEQDGKADLFDQLFGNQQSDTLDQ CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC PDDPSEERNVRGVLNLPGIPDVPGTGGEFHTTCVRTCDGYFFPMSNAASVGDFERDQKNC CCCCCHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH ESSCPGTEMQVFYSRGMDDDSASMTSSVTGRPYSELPTAYLYKQSNMSRPPACGCNAAQN HHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCC FQIIGGNPPPPQQSLPETEAAPLVPVPASKPDPGADPETLANREGGLDREAVKRLSAKPV EEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCC TSPVSALPPEQRKVRVVGPTFLPDPSAAINLQAPAPKAVQ CCCHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure TSGGLKRAHAAMLLGLLLSGATITEPQAASRVCRQLEADLAAASRGGGGGPAMIRKYDA CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIDRQREQISKARDQADSAGCGFSLFSRNINRCAGLNATIDRMNANLDSLQAKRAQLAGG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCC GGSRRDRGRILAALDANGCRDDTVAPRRAPLQEADRGEQDGKADLFDQLFGNQQSDTLDQ CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC PDDPSEERNVRGVLNLPGIPDVPGTGGEFHTTCVRTCDGYFFPMSNAASVGDFERDQKNC CCCCCHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH ESSCPGTEMQVFYSRGMDDDSASMTSSVTGRPYSELPTAYLYKQSNMSRPPACGCNAAQN HHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHCCCEEEEECCCCCCCCCCCCCCCCC FQIIGGNPPPPQQSLPETEAAPLVPVPASKPDPGADPETLANREGGLDREAVKRLSAKPV EEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCC TSPVSALPPEQRKVRVVGPTFLPDPSAAINLQAPAPKAVQ CCCHHHCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA