Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is ycjX [H]
Identifier: 13470939
GI number: 13470939
Start: 608567
End: 610042
Strand: Direct
Name: ycjX [H]
Synonym: mlr0775
Alternate gene names: 13470939
Gene position: 608567-610042 (Clockwise)
Preceding gene: 13470938
Following gene: 13470940
Centisome position: 8.65
GC content: 64.57
Gene sequence:
>1476_bases TTGGCATCATCGCTGACCACCTTCACCGACGAGGCAAGAATTGCCCTCGATACGCTGTCGGGACGCGCCACCGGGCTTTT TTCTCCGTCGCTGCGGCTGGGTGTTACGGGCCTTTCGCGCGCCGGCAAGACGGTGTTCATCTCCGCGCTGGTCCACAATC TGATCCATGGCGGACGCCTGCCGCTGTTCGAGGCGCAGAAATCCGGGCGTATCGCCCGCGCTTTCCTGGAAGAGCAGCCT GACGATGCCGTGCCGCGCTTCCAGTACGAGGACCATATCGCCGCATTGGTCAACGACCGTGCCTGGCCCGATTCCACGCG CGCCATTTCGGAACTGCGGCTGACCATCGAATACGAATCGGCCTCCGGCTGGAGCCGCATGTTCTCTTCGGGCAAATTGT CGGTCGACATCGTCGATTATCCCGGCGAATGGCTGCTCGACCTGCCGCTGCTCGGCAAATCCTTCGCCGATTTTTCACGC GAGGCCATGGAGATGGCCACTTTGCCGGTGCGCGAGGATCTGTCGCGGGCCTGGCGGGCGATCTCGGCGGAAATCGACCC GAATGGCGACGCCGACGAGATGACGGCGCGCCGCCTTGCCGAAAGCTTCGCCGCCTATCTCAAGGCCTGCAAGCTCGACG AGCGCGCGCTTTCGACCTTGCCGCCCGGCCGTTTCCTGATGCCTGGGGATCTGGAAGGCTCGCCGGCGCTGACCTTTGCC CCGCTGGCCGGCCTCGACAGGCGTCCGCGCCCGGGATCGCTGCACGCCATGATGGAGAGGCGCTACGAGGCCTACAAGAC GCATGTCGTCAAACCCTTCTTCCGCGAACACATCACCCGTCTGGACCGCCAGATCGTCCTGATCGACGCCATGCAGGCGC TGAACGCCGGTCCCGGCGCCATGGCCGACCTCGAGCGCGCCGTGACCGAGATCCTCGGCTGTTTCCGCCCTGGCCGCGGC AGCTTCCTCACCGACCTGTTTTCGCGGCGCATCGATCGCATCCTGGTCGCCGCGACCAAGGCCGATCACCTGCACCACGA AAGCCATGACCGGTTGCAGGCGATCGTGCGGCGGCTGGCCGACCGCGCCGTGGCACGGGCGAACTTCACCGGCGCCGATG TCGACGTGGTCGCCATGGCGGCGGTGCGCGCGACCCGCGAAGGTACGGTCAAGCAAGGCCGTGAGACGTTGCCTGTCATC ATCGGCACGCCGATCGCCGGCGAGAAGATCAACGGCGAAACGTTCGACGGAAAGACCGAAACTGCGATATTTCCCGGTGA TTTACCGGAGAAGATTGATGCGGTGTTCGAGGTCTCCGAGCCCGACCACAGGCAGGATTCAACGGACCCGGCAATCCGCT TTGTCCGATTCCGCCCGCCAAAACTCGAACGCACGGCCGAAGGCGTCACGCTGTCTCTGCCGCATATCAGGCTCGACCGT GCCTTGCAGTTCCTGATCGGAGACCATCTGGCATGA
Upstream 100 bases:
>100_bases TTTCTCACACCTGCCGATCTCTAGGGCAGTTCGCCGGCGGCATTTCAAAGCCGGGTTCCAACCCCTATATCGGACGGACG CAAGCCCGAGAGATCACATT
Downstream 100 bases:
>100_bases CCGCGCCCCGCAAACCGGCGGCCTTCCGCATCGAGCCGGAAGCCGCGCCAACACAAGAGACGCCAAAGGCGCGCCAGGCC GAGCTCTCGCGCAAACCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MASSLTTFTDEARIALDTLSGRATGLFSPSLRLGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQKSGRIARAFLEEQP DDAVPRFQYEDHIAALVNDRAWPDSTRAISELRLTIEYESASGWSRMFSSGKLSVDIVDYPGEWLLDLPLLGKSFADFSR EAMEMATLPVREDLSRAWRAISAEIDPNGDADEMTARRLAESFAAYLKACKLDERALSTLPPGRFLMPGDLEGSPALTFA PLAGLDRRPRPGSLHAMMERRYEAYKTHVVKPFFREHITRLDRQIVLIDAMQALNAGPGAMADLERAVTEILGCFRPGRG SFLTDLFSRRIDRILVAATKADHLHHESHDRLQAIVRRLADRAVARANFTGADVDVVAMAAVRATREGTVKQGRETLPVI IGTPIAGEKINGETFDGKTETAIFPGDLPEKIDAVFEVSEPDHRQDSTDPAIRFVRFRPPKLERTAEGVTLSLPHIRLDR ALQFLIGDHLA
Sequences:
>Translated_491_residues MASSLTTFTDEARIALDTLSGRATGLFSPSLRLGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQKSGRIARAFLEEQP DDAVPRFQYEDHIAALVNDRAWPDSTRAISELRLTIEYESASGWSRMFSSGKLSVDIVDYPGEWLLDLPLLGKSFADFSR EAMEMATLPVREDLSRAWRAISAEIDPNGDADEMTARRLAESFAAYLKACKLDERALSTLPPGRFLMPGDLEGSPALTFA PLAGLDRRPRPGSLHAMMERRYEAYKTHVVKPFFREHITRLDRQIVLIDAMQALNAGPGAMADLERAVTEILGCFRPGRG SFLTDLFSRRIDRILVAATKADHLHHESHDRLQAIVRRLADRAVARANFTGADVDVVAMAAVRATREGTVKQGRETLPVI IGTPIAGEKINGETFDGKTETAIFPGDLPEKIDAVFEVSEPDHRQDSTDPAIRFVRFRPPKLERTAEGVTLSLPHIRLDR ALQFLIGDHLA >Mature_490_residues ASSLTTFTDEARIALDTLSGRATGLFSPSLRLGVTGLSRAGKTVFISALVHNLIHGGRLPLFEAQKSGRIARAFLEEQPD DAVPRFQYEDHIAALVNDRAWPDSTRAISELRLTIEYESASGWSRMFSSGKLSVDIVDYPGEWLLDLPLLGKSFADFSRE AMEMATLPVREDLSRAWRAISAEIDPNGDADEMTARRLAESFAAYLKACKLDERALSTLPPGRFLMPGDLEGSPALTFAP LAGLDRRPRPGSLHAMMERRYEAYKTHVVKPFFREHITRLDRQIVLIDAMQALNAGPGAMADLERAVTEILGCFRPGRGS FLTDLFSRRIDRILVAATKADHLHHESHDRLQAIVRRLADRAVARANFTGADVDVVAMAAVRATREGTVKQGRETLPVII GTPIAGEKINGETFDGKTETAIFPGDLPEKIDAVFEVSEPDHRQDSTDPAIRFVRFRPPKLERTAEGVTLSLPHIRLDRA LQFLIGDHLA
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=478, Percent_Identity=37.2384937238494, Blast_Score=291, Evalue=7e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 54268; Mature: 54136
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSLTTFTDEARIALDTLSGRATGLFSPSLRLGVTGLSRAGKTVFISALVHNLIHGGRL CCCCCCCCCCCCEEEEECCCCCCCEECCCCHHCCCCHHHHCCHHHHHHHHHHHHHCCCCC PLFEAQKSGRIARAFLEEQPDDAVPRFQYEDHIAALVNDRAWPDSTRAISELRLTIEYES CEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHEEEEEEECC ASGWSRMFSSGKLSVDIVDYPGEWLLDLPLLGKSFADFSREAMEMATLPVREDLSRAWRA CCCHHHHHCCCCEEEEEEECCCCEEEECCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ISAEIDPNGDADEMTARRLAESFAAYLKACKLDERALSTLPPGRFLMPGDLEGSPALTFA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCCCCCEEEC PLAGLDRRPRPGSLHAMMERRYEAYKTHVVKPFFREHITRLDRQIVLIDAMQALNAGPGA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCH MADLERAVTEILGCFRPGRGSFLTDLFSRRIDRILVAATKADHLHHESHDRLQAIVRRLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DRAVARANFTGADVDVVAMAAVRATREGTVKQGRETLPVIIGTPIAGEKINGETFDGKTE HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC TAIFPGDLPEKIDAVFEVSEPDHRQDSTDPAIRFVRFRPPKLERTAEGVTLSLPHIRLDR EEECCCCCHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCEEECCCHHHHH ALQFLIGDHLA HHHHHHHCCCC >Mature Secondary Structure ASSLTTFTDEARIALDTLSGRATGLFSPSLRLGVTGLSRAGKTVFISALVHNLIHGGRL CCCCCCCCCCCEEEEECCCCCCCEECCCCHHCCCCHHHHCCHHHHHHHHHHHHHCCCCC PLFEAQKSGRIARAFLEEQPDDAVPRFQYEDHIAALVNDRAWPDSTRAISELRLTIEYES CEECCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHEEEEEEECC ASGWSRMFSSGKLSVDIVDYPGEWLLDLPLLGKSFADFSREAMEMATLPVREDLSRAWRA CCCHHHHHCCCCEEEEEEECCCCEEEECCHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH ISAEIDPNGDADEMTARRLAESFAAYLKACKLDERALSTLPPGRFLMPGDLEGSPALTFA HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCEECCCCCCCCCCEEEC PLAGLDRRPRPGSLHAMMERRYEAYKTHVVKPFFREHITRLDRQIVLIDAMQALNAGPGA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCH MADLERAVTEILGCFRPGRGSFLTDLFSRRIDRILVAATKADHLHHESHDRLQAIVRRLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH DRAVARANFTGADVDVVAMAAVRATREGTVKQGRETLPVIIGTPIAGEKINGETFDGKTE HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC TAIFPGDLPEKIDAVFEVSEPDHRQDSTDPAIRFVRFRPPKLERTAEGVTLSLPHIRLDR EEECCCCCHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCEEECCCHHHHH ALQFLIGDHLA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]