Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470777
Identifier: 13470777
GI number: 13470777
Start: 418464
End: 419033
Strand: Direct
Name: 13470777
Synonym: mlr0571
Alternate gene names: NA
Gene position: 418464-419033 (Clockwise)
Preceding gene: 13470776
Following gene: 13470786
Centisome position: 5.95
GC content: 57.19
Gene sequence:
>570_bases ATGGTTGGGCGCCTCTGCATGGAGCCGTTCGCTGGCGAAGGCGCAGGGCAACCCGGACGGAGGCTCAGGTTTGCCGCACG ACCGGGCTTGGGGCCCTTTCGCGACCGTTCTTTGGCCTTTCGTCGAGCCTCACCAGACGCGCTTCCTTGTAAGTCGCCGC CTGGAGATTGCCCTTTCGATAATTTCGAACGGATCGTAGACAATCGCCATAGCCGGTTGGATTTGGACGACAACCCTGCC AGCCGAACCGGGCTTGCCGACCACAACTCGCGATCGGCCGTGCGCGCACTCGTTCTATCAGTCGCCAAGTCTTCCCCCGC GGTGCCCCATCATCATCCGGGAAGCATACATCGTGGGCGAGCGCTTACCCGGCATATTGGCTTCGAGAACGATCTGCTCG ACGAACCCCTGGTTCGTTTCGAATTCAATGCACTCGTCGAGCTTGTCGACAATCCAAAGCATGTATCTATCCGCCACACT CGGCTGATCATTTTTCTTGTCATAGCCGCAATCGTCGGCTGGAATTTCTTGAGGAAAGGCGGAGATCAACATGATTTTTG GTTTTGGTAG
Upstream 100 bases:
>100_bases CTCTATGATTTGAAAGGGCCTTTAGAACGGCCAACATTGACCGAAGCCTCGCAAATCGCTCTTCGACCAAGTCTGTGACC CTTGAAGAGCGTTCGAGAAG
Downstream 100 bases:
>100_bases ATCATAGCAATGTCCTTCATAGGAATAACCCACAATAATACCACAAGACAGCAATTTTCTTTCCCTTGCCGCCTCTTCGA TTGTTAATAACGTTGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MVGRLCMEPFAGEGAGQPGRRLRFAARPGLGPFRDRSLAFRRASPDALPCKSPPGDCPFDNFERIVDNRHSRLDLDDNPA SRTGLADHNSRSAVRALVLSVAKSSPAVPHHHPGSIHRGRALTRHIGFENDLLDEPLVRFEFNALVELVDNPKHVSIRHT RLIIFLVIAAIVGWNFLRKGGDQHDFWFW
Sequences:
>Translated_189_residues MVGRLCMEPFAGEGAGQPGRRLRFAARPGLGPFRDRSLAFRRASPDALPCKSPPGDCPFDNFERIVDNRHSRLDLDDNPA SRTGLADHNSRSAVRALVLSVAKSSPAVPHHHPGSIHRGRALTRHIGFENDLLDEPLVRFEFNALVELVDNPKHVSIRHT RLIIFLVIAAIVGWNFLRKGGDQHDFWFW >Mature_189_residues MVGRLCMEPFAGEGAGQPGRRLRFAARPGLGPFRDRSLAFRRASPDALPCKSPPGDCPFDNFERIVDNRHSRLDLDDNPA SRTGLADHNSRSAVRALVLSVAKSSPAVPHHHPGSIHRGRALTRHIGFENDLLDEPLVRFEFNALVELVDNPKHVSIRHT RLIIFLVIAAIVGWNFLRKGGDQHDFWFW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21180; Mature: 21180
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRLCMEPFAGEGAGQPGRRLRFAARPGLGPFRDRSLAFRRASPDALPCKSPPGDCPFD CCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHH NFERIVDNRHSRLDLDDNPASRTGLADHNSRSAVRALVLSVAKSSPAVPHHHPGSIHRGR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALTRHIGFENDLLDEPLVRFEFNALVELVDNPKHVSIRHTRLIIFLVIAAIVGWNFLRKG HHHHHCCCCCCHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC GDQHDFWFW CCCCCCCCC >Mature Secondary Structure MVGRLCMEPFAGEGAGQPGRRLRFAARPGLGPFRDRSLAFRRASPDALPCKSPPGDCPFD CCCCHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHH NFERIVDNRHSRLDLDDNPASRTGLADHNSRSAVRALVLSVAKSSPAVPHHHPGSIHRGR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ALTRHIGFENDLLDEPLVRFEFNALVELVDNPKHVSIRHTRLIIFLVIAAIVGWNFLRKG HHHHHCCCCCCHHCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC GDQHDFWFW CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA