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The map label for this gene is 13470772

Identifier: 13470772

GI number: 13470772

Start: 414817

End: 415524

Strand: Direct

Name: 13470772

Synonym: mlr0565

Alternate gene names: NA

Gene position: 414817-415524 (Clockwise)

Preceding gene: 13470771

Following gene: 13470775

Centisome position: 5.9

GC content: 66.38

Gene sequence:

>708_bases
ATGAGCAGCCGACTGTTCTGGATTCTGATGGCGGTGATCGGCGTGGGAGCGGCCCTGCTCGTGCTCAATGATTCCGCCGG
CAGCACGCTTGGCGTCGAGAATTACGATTTTGGCCGGCTGATCTGGCTTGGCGCCTTTGGTGCCCTGATCGGCGCCGGCT
TGCTGCGCTCCGGCCGCCCGTTGGGCGACATGGCCCGCAATTTCGGCGCCTGGGCGGCAATCGTGCTGGCGCTGATCGCC
GGCTACCAATATCGCTACGAACTGCAGGACATCGCCAGCCGGGTGACCGCGGGCCTCGTTCCCGGCAGCCCGCTGGCGCT
TGGCGTCGAGGACGGCCACGCTACAGTGACCCTCGACAAGGCTGACAACGGCCATTTCGAAGCGCGCATCCTGGTCAACG
GCAAGCCGGTCCGGGCTGTTGTCGACACCGGCGCGACCAGCACGGTGCTGACGTCGGAAGATGCCCAGGCCGCCGGCTTC
AACCCGGCAGCGCTCAACTACACGATACCGGTTTCGACAGCCAACGGCATGGCGCGCGCCGCGGCGGTCAAGACCGATGC
GGTGGCGATCGGCGGCATCGTGCGCAAGGACATGCCGGTGATGGTCGCGGCACCCGGCATGCTGAGCCAGAGCCTGCTCG
GCATGAATTTCATCGGCTCCTTGTCAGGCTTCGACGTGCGCGGCGACCGCATGATCCTGCGGGACTGA

Upstream 100 bases:

>100_bases
GTTTCACGGAAACGGCGAACCGCTCCAACTCTTTGTTTTAACGCAATTCTTATGGGAAAACCCGTCACGCTTTTCCTGGA
ATTGCTCTAGCGAGGAACGG

Downstream 100 bases:

>100_bases
GCCTAGGCCGCTTCGGCGGCCGCTCCACTGAATTCGACGGCGGCGAACGCCGTCTTCAGCACGTCAGGCCCGGCGCCGGG
CCGGTTTGCGTCGGTGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSSRLFWILMAVIGVGAALLVLNDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRPLGDMARNFGAWAAIVLALIA
GYQYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDKADNGHFEARILVNGKPVRAVVDTGATSTVLTSEDAQAAGF
NPAALNYTIPVSTANGMARAAAVKTDAVAIGGIVRKDMPVMVAAPGMLSQSLLGMNFIGSLSGFDVRGDRMILRD

Sequences:

>Translated_235_residues
MSSRLFWILMAVIGVGAALLVLNDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRPLGDMARNFGAWAAIVLALIA
GYQYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDKADNGHFEARILVNGKPVRAVVDTGATSTVLTSEDAQAAGF
NPAALNYTIPVSTANGMARAAAVKTDAVAIGGIVRKDMPVMVAAPGMLSQSLLGMNFIGSLSGFDVRGDRMILRD
>Mature_234_residues
SSRLFWILMAVIGVGAALLVLNDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRPLGDMARNFGAWAAIVLALIAG
YQYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDKADNGHFEARILVNGKPVRAVVDTGATSTVLTSEDAQAAGFN
PAALNYTIPVSTANGMARAAAVKTDAVAIGGIVRKDMPVMVAAPGMLSQSLLGMNFIGSLSGFDVRGDRMILRD

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24380; Mature: 24248

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00141 ASP_PROTEASE ; PS50175 ASP_PROT_RETROV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRLFWILMAVIGVGAALLVLNDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRP
CCCHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LGDMARNFGAWAAIVLALIAGYQYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDK
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEC
ADNGHFEARILVNGKPVRAVVDTGATSTVLTSEDAQAAGFNPAALNYTIPVSTANGMARA
CCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHH
AAVKTDAVAIGGIVRKDMPVMVAAPGMLSQSLLGMNFIGSLSGFDVRGDRMILRD
HHHCCCCEEECCHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCEEEECC
>Mature Secondary Structure 
SSRLFWILMAVIGVGAALLVLNDSAGSTLGVENYDFGRLIWLGAFGALIGAGLLRSGRP
CCHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
LGDMARNFGAWAAIVLALIAGYQYRYELQDIASRVTAGLVPGSPLALGVEDGHATVTLDK
HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEC
ADNGHFEARILVNGKPVRAVVDTGATSTVLTSEDAQAAGFNPAALNYTIPVSTANGMARA
CCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHH
AAVKTDAVAIGGIVRKDMPVMVAAPGMLSQSLLGMNFIGSLSGFDVRGDRMILRD
HHHCCCCEEECCHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]