Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470717
Identifier: 13470717
GI number: 13470717
Start: 365702
End: 366109
Strand: Direct
Name: 13470717
Synonym: mlr0495
Alternate gene names: NA
Gene position: 365702-366109 (Clockwise)
Preceding gene: 13470716
Following gene: 13470718
Centisome position: 5.2
GC content: 61.03
Gene sequence:
>408_bases ATGCTGCTTGTCCCGCCCATGAAGACACTCTGCATGATGGCCATTGCGTCCCTGACGCTGGCTTTCCCGGCCAGCGCGAT GGACAATGCTTTGCGTGCCGGGCTGATGAAACTTGATCCGCAAACACGCCTCGAGCAGCGCTGCGATGCCGAAGTCCTGG ACCGGATCACCCACGATGATCGCAAGTTCAAGGCCGACCGGGTCGTCGCCTACGCCTTCGCGACGCCCGAGATGAGCGCC GATGCGATCAGGAGTCCGGGTGCGGCGTTCCGCAGCAAGGGACAGTGGTATCGGCTGAAATTCAAATGCCAGACCGGGCC GGACCATATGGACGTCCTGCAGCTGCGCTACCGGATCGGCGACGAAATTCCGGAAGCCGACTGGGCGAAGTACAATCTCT ACGATTAG
Upstream 100 bases:
>100_bases ATGATGAGGTCCGACACGAGATTTTGATTGCGTCGACCCCCTGAATGCCGGGCCTTGGCGGGCATGGCGCGCCCCTCTTG GTTGATTTCTCAGACAAAAC
Downstream 100 bases:
>100_bases TTTTTCGCGGGGTTGGTTCGGCTTCGGCTCACCAGCCGGCGGCGGCTGAGAATCTCCTGGTATACCCCTGCCACGAAATT GGTTTTCCAGTGTTGTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLLVPPMKTLCMMAIASLTLAFPASAMDNALRAGLMKLDPQTRLEQRCDAEVLDRITHDDRKFKADRVVAYAFATPEMSA DAIRSPGAAFRSKGQWYRLKFKCQTGPDHMDVLQLRYRIGDEIPEADWAKYNLYD
Sequences:
>Translated_135_residues MLLVPPMKTLCMMAIASLTLAFPASAMDNALRAGLMKLDPQTRLEQRCDAEVLDRITHDDRKFKADRVVAYAFATPEMSA DAIRSPGAAFRSKGQWYRLKFKCQTGPDHMDVLQLRYRIGDEIPEADWAKYNLYD >Mature_135_residues MLLVPPMKTLCMMAIASLTLAFPASAMDNALRAGLMKLDPQTRLEQRCDAEVLDRITHDDRKFKADRVVAYAFATPEMSA DAIRSPGAAFRSKGQWYRLKFKCQTGPDHMDVLQLRYRIGDEIPEADWAKYNLYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15359; Mature: 15359
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVPPMKTLCMMAIASLTLAFPASAMDNALRAGLMKLDPQTRLEQRCDAEVLDRITHDD CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCC RKFKADRVVAYAFATPEMSADAIRSPGAAFRSKGQWYRLKFKCQTGPDHMDVLQLRYRIG HHHCCCCEEEEEECCCCCCHHHHCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHC DEIPEADWAKYNLYD CCCCCCCCCCCCCCC >Mature Secondary Structure MLLVPPMKTLCMMAIASLTLAFPASAMDNALRAGLMKLDPQTRLEQRCDAEVLDRITHDD CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCC RKFKADRVVAYAFATPEMSADAIRSPGAAFRSKGQWYRLKFKCQTGPDHMDVLQLRYRIG HHHCCCCEEEEEECCCCCCHHHHCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHC DEIPEADWAKYNLYD CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA