Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13470702

Identifier: 13470702

GI number: 13470702

Start: 349847

End: 350212

Strand: Direct

Name: 13470702

Synonym: mlr0478

Alternate gene names: NA

Gene position: 349847-350212 (Clockwise)

Preceding gene: 13470699

Following gene: 13470703

Centisome position: 4.97

GC content: 56.28

Gene sequence:

>366_bases
GTGGCTTTGGCGCTGGGGGGTGCCTTGATGAAGTGGCGTTTGTATTTTGTCGTGATGACTCTGGCTGTCACGTCCGGCTG
TGCTGCCGACTATTTGAACAACTATGACACGGTGACGCTTGCATCTGGTGATGCAAATCACACGAATTCGCTTCTGCAAA
CCGTCGATCCTTTCAACCCCAACAGCAACAACACGCATATCGAAGGTGACGGCCAACGCATCGTTGGCGTGGTTCAACGG
TACAGATCGCCGATCTCTGCCGGTGGCGGCTATTCCGGCAACTGCCCGACCGATAACAGCGTGGCGGCTGATGGCTCACA
TTGCGGCAAGCGATCCGCTGAAAGCCGTCCAGGCGGTGCAATGTGA

Upstream 100 bases:

>100_bases
AATAAACCCGGCCCAATTCTATAGCACGGTCGCAGCGGCATTCAATCTGACGCAAGCCAATTCGACAGCGGATTCGACAA
CAAAGTAAAGAAGGCGCATT

Downstream 100 bases:

>100_bases
GCGGCATCGACAGATCGCGCTACGACAATCGCTCTGACCAATGGCGGCGGCGCACTGGCGCGAAGCGCTCGCGCGCCAGA
AGATGGGCAAGCGTGCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MALALGGALMKWRLYFVVMTLAVTSGCAADYLNNYDTVTLASGDANHTNSLLQTVDPFNPNSNNTHIEGDGQRIVGVVQR
YRSPISAGGGYSGNCPTDNSVAADGSHCGKRSAESRPGGAM

Sequences:

>Translated_121_residues
MALALGGALMKWRLYFVVMTLAVTSGCAADYLNNYDTVTLASGDANHTNSLLQTVDPFNPNSNNTHIEGDGQRIVGVVQR
YRSPISAGGGYSGNCPTDNSVAADGSHCGKRSAESRPGGAM
>Mature_120_residues
ALALGGALMKWRLYFVVMTLAVTSGCAADYLNNYDTVTLASGDANHTNSLLQTVDPFNPNSNNTHIEGDGQRIVGVVQRY
RSPISAGGGYSGNCPTDNSVAADGSHCGKRSAESRPGGAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12625; Mature: 12494

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALALGGALMKWRLYFVVMTLAVTSGCAADYLNNYDTVTLASGDANHTNSLLQTVDPFNP
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCC
NSNNTHIEGDGQRIVGVVQRYRSPISAGGGYSGNCPTDNSVAADGSHCGKRSAESRPGGA
CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
C
>Mature Secondary Structure 
ALALGGALMKWRLYFVVMTLAVTSGCAADYLNNYDTVTLASGDANHTNSLLQTVDPFNP
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCC
NSNNTHIEGDGQRIVGVVQRYRSPISAGGGYSGNCPTDNSVAADGSHCGKRSAESRPGGA
CCCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA