Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13470698
Identifier: 13470698
GI number: 13470698
Start: 345774
End: 346442
Strand: Direct
Name: 13470698
Synonym: mlr0474
Alternate gene names: NA
Gene position: 345774-346442 (Clockwise)
Preceding gene: 13470695
Following gene: 13470699
Centisome position: 4.91
GC content: 54.26
Gene sequence:
>669_bases GTGGTTTCCCCAAGGTATTGCACGCAATCCACGGGTTTTTCTTGCCATGTAGGCGGCCACGGTGTAGCGCTGTGGCATTA TATGGGAGTGCTAGGTATGGCAAAAGACGTCACGCGGGGCGGGAAAAGCGAGACACTCACCATCCGGTTGGACCCAAAGA CGCGGTTCATTCTGGAGTACCTTTCCAGACTGAAGGGACAGAACATTACTACAGTGGTTGAGCGCGCGATTGTTGCCGCC GCTTCACAGGAAATGGTTCCTGATCCGCAGTGGCCCGACCAGCCAGACGGGTGGCAGCGCTTTTGGGATGTTAGTGATGG ATGTCGTGCGCTGCGAATGGCAGAGCGCGCAGAGTTCTTCCCAACCTATGAGGAGGAACGACGCTTGGCTTTTGCGAAAA GTCATTGGCCGTTTTTTTACAGCTCCGAAGACAGGGCGCGTTTCGTCAATCACTATATCGACGTTCTATGGCCTCGGATC GATGAGTTCATCCAGATTTATGATGACCAAAAACAGAGCGATTATTTTGCCGCCGGCAAGGCCATGCAGGCGGCGCTTAG GGCGGCGCAACTTGCTGCTCCAGAATGGCCGATCCCAGCAAAAACCAAACCGCCAGAAAAACCAAAACCTGCGCCAAACC GCGAACTCGATGACGAAATCCCGTTCTGA
Upstream 100 bases:
>100_bases GCGCCTGTCCTGCTTTTGTTCCGTGATTTGATCATCCAAAGCACTGCAATAATAGTACATCCTGCGAGTCGGTGGTTCAA GGGTCCGCCAGCGATATCTT
Downstream 100 bases:
>100_bases GGACAAGAGTATATGAAAGGCCATATCCGCGAGCGCAGCCCAGGCCATTGGGCAATCGTCCTCGATGTCGGCGAGGTCGA CCCGAAGACCGGCAAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MVSPRYCTQSTGFSCHVGGHGVALWHYMGVLGMAKDVTRGGKSETLTIRLDPKTRFILEYLSRLKGQNITTVVERAIVAA ASQEMVPDPQWPDQPDGWQRFWDVSDGCRALRMAERAEFFPTYEEERRLAFAKSHWPFFYSSEDRARFVNHYIDVLWPRI DEFIQIYDDQKQSDYFAAGKAMQAALRAAQLAAPEWPIPAKTKPPEKPKPAPNRELDDEIPF
Sequences:
>Translated_222_residues MVSPRYCTQSTGFSCHVGGHGVALWHYMGVLGMAKDVTRGGKSETLTIRLDPKTRFILEYLSRLKGQNITTVVERAIVAA ASQEMVPDPQWPDQPDGWQRFWDVSDGCRALRMAERAEFFPTYEEERRLAFAKSHWPFFYSSEDRARFVNHYIDVLWPRI DEFIQIYDDQKQSDYFAAGKAMQAALRAAQLAAPEWPIPAKTKPPEKPKPAPNRELDDEIPF >Mature_222_residues MVSPRYCTQSTGFSCHVGGHGVALWHYMGVLGMAKDVTRGGKSETLTIRLDPKTRFILEYLSRLKGQNITTVVERAIVAA ASQEMVPDPQWPDQPDGWQRFWDVSDGCRALRMAERAEFFPTYEEERRLAFAKSHWPFFYSSEDRARFVNHYIDVLWPRI DEFIQIYDDQKQSDYFAAGKAMQAALRAAQLAAPEWPIPAKTKPPEKPKPAPNRELDDEIPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25484; Mature: 25484
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSPRYCTQSTGFSCHVGGHGVALWHYMGVLGMAKDVTRGGKSETLTIRLDPKTRFILEY CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH LSRLKGQNITTVVERAIVAAASQEMVPDPQWPDQPDGWQRFWDVSDGCRALRMAERAEFF HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHC PTYEEERRLAFAKSHWPFFYSSEDRARFVNHYIDVLWPRIDEFIQIYDDQKQSDYFAAGK CCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AMQAALRAAQLAAPEWPIPAKTKPPEKPKPAPNRELDDEIPF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVSPRYCTQSTGFSCHVGGHGVALWHYMGVLGMAKDVTRGGKSETLTIRLDPKTRFILEY CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHH LSRLKGQNITTVVERAIVAAASQEMVPDPQWPDQPDGWQRFWDVSDGCRALRMAERAEFF HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHC PTYEEERRLAFAKSHWPFFYSSEDRARFVNHYIDVLWPRIDEFIQIYDDQKQSDYFAAGK CCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AMQAALRAAQLAAPEWPIPAKTKPPEKPKPAPNRELDDEIPF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA