Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
---|---|
Accession | NC_002678 |
Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470601
Identifier: 13470601
GI number: 13470601
Start: 253084
End: 253512
Strand: Direct
Name: 13470601
Synonym: mlr0358
Alternate gene names: NA
Gene position: 253084-253512 (Clockwise)
Preceding gene: 13470600
Following gene: 13470602
Centisome position: 3.6
GC content: 59.67
Gene sequence:
>429_bases GTGAAGCTGCGGCCGAACGAGCGCGTCACCATCCGCGAATTCAAGCGCCGGCCGGATTTGCGCCGTATGGCGCGCTCGAT CGACATCCAGTCGATCAATTTCGGCTTCGGCTTGGCAGCTATTTCCAGTTCGCAATACGACAAGATCGAGAATATCGCCG ATGCACTGCAACGCATCCTGCGCCGCGATCCCGGCGCGCGTGCTGATCGAAGGACACACCGACGCAGTCGGCTCCTTCCA GTCGAACCAGGTCCTGTCCGAACAACAGGCCCTTCGTTGAAAGGCACGCTGGTGCGCGAATTCGGTGTACCCGGCTATGC CCTGGAGACCGTTGGCTGCGGCGAGGAGTTCCTGCTCATGCCGACGCAGAACGAAAACTGGCAGAATCGCAGGGTGACAT TGCGACGCTTCGACTATTTCATTCGGTGA
Upstream 100 bases:
>100_bases CGCTCTGATCGCCGCGATTGCCATGCCGAGCCTTGCCGCCGCCTAGGCGACGACCCCCTCGACCGCGACGATCGAGCGCA AGCTCGAGGCGGCGCCGCGA
Downstream 100 bases:
>100_bases TCTCCAATCTGGTTAGCCGGCTTATTTAGACGATTTGGCGTTATCGCTGGTGCCTTGGTCCGGGGGACTGATCGCCAACA TCGCATCGGACCTCGATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKLRPNERVTIREFKRRPDLRRMARSIDIQSINFGFGLAAISSSQYDKIENIADALQRILRRDPGARADRRTHRRSRLLP VEPGPVRTTGPSLKGTLVREFGVPGYALETVGCGEEFLLMPTQNENWQNRRVTLRRFDYFIR
Sequences:
>Translated_142_residues MKLRPNERVTIREFKRRPDLRRMARSIDIQSINFGFGLAAISSSQYDKIENIADALQRILRRDPGARADRRTHRRSRLLP VEPGPVRTTGPSLKGTLVREFGVPGYALETVGCGEEFLLMPTQNENWQNRRVTLRRFDYFIR >Mature_142_residues MKLRPNERVTIREFKRRPDLRRMARSIDIQSINFGFGLAAISSSQYDKIENIADALQRILRRDPGARADRRTHRRSRLLP VEPGPVRTTGPSLKGTLVREFGVPGYALETVGCGEEFLLMPTQNENWQNRRVTLRRFDYFIR
Specific function: Unknown
COG id: COG2885
COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16527; Mature: 16527
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRPNERVTIREFKRRPDLRRMARSIDIQSINFGFGLAAISSSQYDKIENIADALQRIL CCCCCCCCCHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHH RRDPGARADRRTHRRSRLLPVEPGPVRTTGPSLKGTLVREFGVPGYALETVGCGEEFLLM HCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEE PTQNENWQNRRVTLRRFDYFIR CCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKLRPNERVTIREFKRRPDLRRMARSIDIQSINFGFGLAAISSSQYDKIENIADALQRIL CCCCCCCCCHHHHHHCCCHHHHHHHHCCCEEECCCCCHHHHCCCHHHHHHHHHHHHHHHH RRDPGARADRRTHRRSRLLPVEPGPVRTTGPSLKGTLVREFGVPGYALETVGCGEEFLLM HCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEE PTQNENWQNRRVTLRRFDYFIR CCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA