Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is sseA [H]
Identifier: 13470599
GI number: 13470599
Start: 251420
End: 252301
Strand: Direct
Name: sseA [H]
Synonym: mlr0355
Alternate gene names: 13470599
Gene position: 251420-252301 (Clockwise)
Preceding gene: 13470598
Following gene: 13470600
Centisome position: 3.57
GC content: 65.87
Gene sequence:
>882_bases ATGGCCCAGGACAGTCCTTTCACCGTCGATGCGGACTGGCTGCAGGCGCGCCTGGGCGAGCCCGGCCTGACCATCGTGGA CGCATCCTGGTACCTGCCGGCGCAAAAGCGCGACGCGCGCGCCGAATATAATGCAGCGCACATCCCGGGCGCCCGTTTCC TGGATCAGGACGCGGTGTCGGATCCCGACGCTGCTTTGCCGCACACGCTGCCTTCGCCTCAGCATTTCGCGCAATATGTT GGTTCGATGGGCGTGTCCGCCGATGACACCATTGTCGTCTATGATGGTCCCGGCTTTTTCTCGGCACCCCGGGCATGGTG GATGTTCCGCATTATGGGTGTTTTCCAGACCTATATCCTGGATGGCGGATTCGACGCCTGGAAAACGGCCGGCCGGCCGG TAACGGCCGAGCCGACGAAGATCGCGCCAAGCGTGTTCCATGCCGATTTCGACGCCGGCCGCGTCGCCAGCCTCGCCGAC ATGCGCCGGATCGTCGAGACCAGCGCCAGCCAGATTGCCGACGCCCGTGGACCCGGCCGCTTCACCGGCGCCGAGCCCGA GCCCCGCGCGGGTATCCGCTCCGGCCATATGCCGGGAGCGCGCAACGTACCGTACTCCGCCCTGTCGGAAAACGGCATGC TGTTGTCGAAGGACCGTTTGCGCAAGGTGATCGAGGAGGCCGGCATTGACCTGTCGAAGCCCGTCGTCACATCTTGCGGC TCCGGTGTCACCGCCGCGGTGGTTACGCTGGCGCTGGAGACGCTTGGCCACACCGACAACAGGCTCTATGACGGCTCATG GACGGAATGGGGCGGGCTCTCCGACACGCCTGTCGTGACCGGCCCCGCGACGCCCGGTCCCGCTAAGACCGGCAAGGAAT GA
Upstream 100 bases:
>100_bases GAAGAAGGGCCGCGAGAACAGGCGCTTCCGCATCCGCTTCGGCCCGATGCCGGCAGCCTGAACACGCAACACTTGCTTAC CCGGGATAGAGAGAACCAGA
Downstream 100 bases:
>100_bases ACGCGATGGAAAACGGTGTGCTGCAGGACATTGAAGTCACGGTGACTTTTCTCGAAATGGATGCCCCTCCCGCCGTCTCC CCGCCAGTGCCCTACAACCG
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAQDSPFTVDADWLQARLGEPGLTIVDASWYLPAQKRDARAEYNAAHIPGARFLDQDAVSDPDAALPHTLPSPQHFAQYV GSMGVSADDTIVVYDGPGFFSAPRAWWMFRIMGVFQTYILDGGFDAWKTAGRPVTAEPTKIAPSVFHADFDAGRVASLAD MRRIVETSASQIADARGPGRFTGAEPEPRAGIRSGHMPGARNVPYSALSENGMLLSKDRLRKVIEEAGIDLSKPVVTSCG SGVTAAVVTLALETLGHTDNRLYDGSWTEWGGLSDTPVVTGPATPGPAKTGKE
Sequences:
>Translated_293_residues MAQDSPFTVDADWLQARLGEPGLTIVDASWYLPAQKRDARAEYNAAHIPGARFLDQDAVSDPDAALPHTLPSPQHFAQYV GSMGVSADDTIVVYDGPGFFSAPRAWWMFRIMGVFQTYILDGGFDAWKTAGRPVTAEPTKIAPSVFHADFDAGRVASLAD MRRIVETSASQIADARGPGRFTGAEPEPRAGIRSGHMPGARNVPYSALSENGMLLSKDRLRKVIEEAGIDLSKPVVTSCG SGVTAAVVTLALETLGHTDNRLYDGSWTEWGGLSDTPVVTGPATPGPAKTGKE >Mature_292_residues AQDSPFTVDADWLQARLGEPGLTIVDASWYLPAQKRDARAEYNAAHIPGARFLDQDAVSDPDAALPHTLPSPQHFAQYVG SMGVSADDTIVVYDGPGFFSAPRAWWMFRIMGVFQTYILDGGFDAWKTAGRPVTAEPTKIAPSVFHADFDAGRVASLADM RRIVETSASQIADARGPGRFTGAEPEPRAGIRSGHMPGARNVPYSALSENGMLLSKDRLRKVIEEAGIDLSKPVVTSCGS GVTAAVVTLALETLGHTDNRLYDGSWTEWGGLSDTPVVTGPATPGPAKTGKE
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI194473668, Length=270, Percent_Identity=43.3333333333333, Blast_Score=232, Evalue=3e-61, Organism=Homo sapiens, GI61835204, Length=270, Percent_Identity=43.3333333333333, Blast_Score=231, Evalue=4e-61, Organism=Homo sapiens, GI194473681, Length=270, Percent_Identity=43.3333333333333, Blast_Score=231, Evalue=4e-61, Organism=Homo sapiens, GI17402865, Length=270, Percent_Identity=42.5925925925926, Blast_Score=214, Evalue=8e-56, Organism=Escherichia coli, GI87082121, Length=271, Percent_Identity=42.4354243542435, Blast_Score=220, Evalue=8e-59, Organism=Escherichia coli, GI87081967, Length=286, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997283, Length=245, Percent_Identity=29.7959183673469, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17561888, Length=289, Percent_Identity=28.0276816608997, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17559150, Length=273, Percent_Identity=26.3736263736264, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI115534702, Length=266, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17543836, Length=294, Percent_Identity=27.2108843537415, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17543838, Length=294, Percent_Identity=27.2108843537415, Blast_Score=81, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6324825, Length=268, Percent_Identity=35.4477611940299, Blast_Score=160, Evalue=3e-40,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31271; Mature: 31140
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDSPFTVDADWLQARLGEPGLTIVDASWYLPAQKRDARAEYNAAHIPGARFLDQDAVS CCCCCCCEEEHHHHHHHCCCCCCEEEECCEECCCHHCCCHHHCCCCCCCCHHHHCCCCCC DPDAALPHTLPSPQHFAQYVGSMGVSADDTIVVYDGPGFFSAPRAWWMFRIMGVFQTYIL CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH DGGFDAWKTAGRPVTAEPTKIAPSVFHADFDAGRVASLADMRRIVETSASQIADARGPGR CCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC FTGAEPEPRAGIRSGHMPGARNVPYSALSENGMLLSKDRLRKVIEEAGIDLSKPVVTSCG CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHHHCC SGVTAAVVTLALETLGHTDNRLYDGSWTEWGGLSDTPVVTGPATPGPAKTGKE CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure AQDSPFTVDADWLQARLGEPGLTIVDASWYLPAQKRDARAEYNAAHIPGARFLDQDAVS CCCCCCEEEHHHHHHHCCCCCCEEEECCEECCCHHCCCHHHCCCCCCCCHHHHCCCCCC DPDAALPHTLPSPQHFAQYVGSMGVSADDTIVVYDGPGFFSAPRAWWMFRIMGVFQTYIL CCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH DGGFDAWKTAGRPVTAEPTKIAPSVFHADFDAGRVASLADMRRIVETSASQIADARGPGR CCCCHHHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC FTGAEPEPRAGIRSGHMPGARNVPYSALSENGMLLSKDRLRKVIEEAGIDLSKPVVTSCG CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECHHHHHHHHHHHCCCCCCCHHHHCC SGVTAAVVTLALETLGHTDNRLYDGSWTEWGGLSDTPVVTGPATPGPAKTGKE CCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]