| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358134
GI number: 13358134
Start: 708998
End: 709831
Strand: Reverse
Name: Not Available
Synonym: UU569
Alternate gene names: 13358134
Gene position: 709831-708998 (Counterclockwise)
Preceding gene: 13358135
Following gene: 13358133
Centisome position: 94.43
GC content: 23.02
Gene sequence:
>834_bases ATGCAATATAAGATGTTAGTTATTGATCTAGATGGTACTTTATTAACGAAAACAAAAAACATTAGTAAAGCTAATTTACA AGGATTAAAAAAATATATTAGTTTAGGCGGTAAGGTTGTACTAAGTACAGGACGTTCATTAGAAAATACTTTAAAGATTG TGCATTTAATTCATGATCAAATCAAGGAATTAATCCAATATATTTCATGTTTTAATGGCTCATATATTTATGATGTTATT AATGAAAAAGTATTGTTTGAATCAACAATTAATAAAGATATAGTGAATGAAATCTATAAATTTTCATTAAAACATGGATT AGGATTTTGACCATATAACCAAAGGTTTATGCAAACACATTTTTTAGATGTTTATAATATTAACTATAAATTTTTATTAC AACTTCATCACACAAAAAGAAAAGTTTGTTTAAACCCAATTTTTAATAAAAATGATAAATTTTATAAAATTAATATTTTA CCTTCAAATTTTGTTAAAAAATTAAAACACGAGGTTATAGATCAATTGATTAAAGAATTTAGTGATCAAGTAAATATTTC ATTCACCTCAAAATACATTGTTGAAGTGACTAATAAAAATATTAATAAGGCATCATCATTACGATTTATTGCTAATTTAT ACCAGATTAATTTAGATAAGGTTGCAACGATTGGCGATTCGCCTAATGATATTCCAATGTTTAAAATTAGTGGTTTAGCA GCGGCTGCTAGAACTAAATCTAAAACAATTATTGAACATGTTGATGTGATTATTAATTATAAAAATAATTCTAATTCTGT TGCATTATTTATTAATAATTACTTACTAAAATAA
Upstream 100 bases:
>100_bases CAAACAAGCTGAAGTTGAAGAAATTGAACAAGAAGTTGATATTGATGATTTAATTTCAAACGGTTTATAAAAATTAGAGC CTTTAAGGAAATTATAAAAT
Downstream 100 bases:
>100_bases AAACCAAAGCGTTAAGTAAAAATACTTGACAGCTTGGTTTTTTTTATTTATAATTTAAAAGTTATTTTAATAATAAAACA AACGAGGTGAAAATTTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI NEKVLFESTINKDIVNEIYKFSLKHGLGFWPYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK
Sequences:
>Translated_277_residues MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI NEKVLFESTINKDIVNEIYKFSLKHGLGF*PYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK >Mature_277_residues MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI NEKVLFESTINKDIVNEIYKFSLKHGLGF*PYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=285, Percent_Identity=23.5087719298246, Blast_Score=77, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 31803; Mature: 31803
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQ CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH IKELIQYISCFNGSYIYDVINEKVLFESTINKDIVNEIYKFSLKHGLGFPYNQRFMQTHF HHHHHHHHHHCCCCEEEEHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINILPSNFVKKLKHEVIDQLIKEFS EEEEECCEEEEEEEHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH DQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLAA HCEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEECCHHH AARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK HHHHHHHHHHHEEEEEEEEECCCCEEEEEEECEECC >Mature Secondary Structure MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQ CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH IKELIQYISCFNGSYIYDVINEKVLFESTINKDIVNEIYKFSLKHGLGFPYNQRFMQTHF HHHHHHHHHHCCCCEEEEHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINILPSNFVKKLKHEVIDQLIKEFS EEEEECCEEEEEEEHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH DQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLAA HCEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEECCHHH AARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK HHHHHHHHHHHEEEEEEEEECCCCEEEEEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]