Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358134

GI number: 13358134

Start: 708998

End: 709831

Strand: Reverse

Name: Not Available

Synonym: UU569

Alternate gene names: 13358134

Gene position: 709831-708998 (Counterclockwise)

Preceding gene: 13358135

Following gene: 13358133

Centisome position: 94.43

GC content: 23.02

Gene sequence:

>834_bases
ATGCAATATAAGATGTTAGTTATTGATCTAGATGGTACTTTATTAACGAAAACAAAAAACATTAGTAAAGCTAATTTACA
AGGATTAAAAAAATATATTAGTTTAGGCGGTAAGGTTGTACTAAGTACAGGACGTTCATTAGAAAATACTTTAAAGATTG
TGCATTTAATTCATGATCAAATCAAGGAATTAATCCAATATATTTCATGTTTTAATGGCTCATATATTTATGATGTTATT
AATGAAAAAGTATTGTTTGAATCAACAATTAATAAAGATATAGTGAATGAAATCTATAAATTTTCATTAAAACATGGATT
AGGATTTTGACCATATAACCAAAGGTTTATGCAAACACATTTTTTAGATGTTTATAATATTAACTATAAATTTTTATTAC
AACTTCATCACACAAAAAGAAAAGTTTGTTTAAACCCAATTTTTAATAAAAATGATAAATTTTATAAAATTAATATTTTA
CCTTCAAATTTTGTTAAAAAATTAAAACACGAGGTTATAGATCAATTGATTAAAGAATTTAGTGATCAAGTAAATATTTC
ATTCACCTCAAAATACATTGTTGAAGTGACTAATAAAAATATTAATAAGGCATCATCATTACGATTTATTGCTAATTTAT
ACCAGATTAATTTAGATAAGGTTGCAACGATTGGCGATTCGCCTAATGATATTCCAATGTTTAAAATTAGTGGTTTAGCA
GCGGCTGCTAGAACTAAATCTAAAACAATTATTGAACATGTTGATGTGATTATTAATTATAAAAATAATTCTAATTCTGT
TGCATTATTTATTAATAATTACTTACTAAAATAA

Upstream 100 bases:

>100_bases
CAAACAAGCTGAAGTTGAAGAAATTGAACAAGAAGTTGATATTGATGATTTAATTTCAAACGGTTTATAAAAATTAGAGC
CTTTAAGGAAATTATAAAAT

Downstream 100 bases:

>100_bases
AAACCAAAGCGTTAAGTAAAAATACTTGACAGCTTGGTTTTTTTTATTTATAATTTAAAAGTTATTTTAATAATAAAACA
AACGAGGTGAAAATTTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI
NEKVLFESTINKDIVNEIYKFSLKHGLGFWPYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL
PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA
AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK

Sequences:

>Translated_277_residues
MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI
NEKVLFESTINKDIVNEIYKFSLKHGLGF*PYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL
PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA
AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK
>Mature_277_residues
MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQIKELIQYISCFNGSYIYDVI
NEKVLFESTINKDIVNEIYKFSLKHGLGF*PYNQRFMQTHFLDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINIL
PSNFVKKLKHEVIDQLIKEFSDQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLA
AAARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=285, Percent_Identity=23.5087719298246, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 31803; Mature: 31803

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQ
CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
IKELIQYISCFNGSYIYDVINEKVLFESTINKDIVNEIYKFSLKHGLGFPYNQRFMQTHF
HHHHHHHHHHCCCCEEEEHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINILPSNFVKKLKHEVIDQLIKEFS
EEEEECCEEEEEEEHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
DQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLAA
HCEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEECCHHH
AARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK
HHHHHHHHHHHEEEEEEEEECCCCEEEEEEECEECC
>Mature Secondary Structure
MQYKMLVIDLDGTLLTKTKNISKANLQGLKKYISLGGKVVLSTGRSLENTLKIVHLIHDQ
CCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH
IKELIQYISCFNGSYIYDVINEKVLFESTINKDIVNEIYKFSLKHGLGFPYNQRFMQTHF
HHHHHHHHHHCCCCEEEEHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LDVYNINYKFLLQLHHTKRKVCLNPIFNKNDKFYKINILPSNFVKKLKHEVIDQLIKEFS
EEEEECCEEEEEEEHHCCHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
DQVNISFTSKYIVEVTNKNINKASSLRFIANLYQINLDKVATIGDSPNDIPMFKISGLAA
HCEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHCCHHHEEECCCCCCCCCEEEECCHHH
AARTKSKTIIEHVDVIINYKNNSNSVALFINNYLLK
HHHHHHHHHHHEEEEEEEEECCCCEEEEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]