| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is fusA
Identifier: 13358087
GI number: 13358087
Start: 648562
End: 650628
Strand: Reverse
Name: fusA
Synonym: UU523
Alternate gene names: 13358087
Gene position: 650628-648562 (Counterclockwise)
Preceding gene: 13358088
Following gene: 13358086
Centisome position: 86.55
GC content: 33.77
Gene sequence:
>2067_bases ATGTCTAAAGAATTAAAATTATTTCGTAACTTTGGAATCATGGCACACATTGATGCTGGTAAAACAACAACCTCTGAACG GATTTTATATCATACAGGAAAGAATCATAAAATCGGAGAGACTCACGATGGTGCTGCAACAATGGATTGAATGGCACAAG AAAAAGAACGTGGAATTACCATTACATCAGCAGCAACTTATGCAAAATGAAAAGGTCATAGTTTAAATTTAATTGATACA CCGGGACACGTTGATTTTACTGTTGAAGTAGAACGTTCTTTGCGTGTTTTAGATGGAGCTGTCGCTGTTCTAGATGGTCA AAATGGAGTTGAACCACAAACTGAAACAGTCTGAAGACAAGCTACTAAATATAATGTTCCAAGAATCGTTTTTGTTAATA AGATGGATAAAACAGGTGCTGATTTTTATTACTCAATTGAGACAATGAAGAATCGTTTAGGTGTTAAAGCCACAGCTATT CAAATTCCAATTGGTGCTGAAGCCGATTTTGTTGGAAGTATTGATTTAATTGAAATGAAAGCTTATATTTATGATGGAAA AGCTGATGAAGAATATAAAATTGAAGATATTCCAGCTGATTACTTAACAAAAGCACAAGTAATGCGTTCACAAATGATCG ATGATGTAGCTGTTTTTGATGATGAAGTGATGGAAAAATACTTATCTGGTGAAGAACTAAGTCATGAAGATATTAAAAAA TGTATTCGTAAAGGAGTAATTTCAACTGAATTATACCCAGTATTATGTGGTACAGCTTTTAAAAACAAAGGTGTTAAAAA ATTATTAGACGCAGTTGTTGATTTCTTACCTTCACCAATTGATGTTCCACCAATTAAAGGTGTTGATGATCATGGTAATC CAATTGAATATCATAATGATCCAAATGAACCATTTGCTGCCCTTGCCTTCAAAGTCGCAACTGATCCTTTTGTTGGACGT TTAACATATATTCGTGTATATAGTGGTAAACTTGACAAAGGTACTTATATTTACAATGCAACAAAAGATAAAAAAGAAAG AATTTCTCGTCTTGTAAAAATGCATTCAAACAACCGTGATGAGATTGATTCAATTAGTGCTGGTGATATTTGTGCTGTAA TTGGATTAAAAGACACTACTACTGGTGATACAATTTGTGATGAAAAAAAACCAGTTATTTTAGAACAAATGGTATTTGCA GAACCTGTTATTTCTTTATCTGTTGAACCAAAAACTAAAGCAGATCAAGAAAAGATGAGTTTAGCTTTATCTAAATTAGC TGAAGAAGATCCAACTTTTAGAACATACACAAATGAAGAAACAGGTCAAACTATTATTGCTGGAATGGGTGAATTACATT TAGATGTTTTGGTTGATCGTATGCGTCGTGAATTTAATGTTCAAGTTAATGTAGGTGCTCCTCAAGTTAGTTATCGTGAG ACATTTACTGAAGTTGCTGATGCTGAAGGTAAGTATATTAAGCAATCTGGTGGACGTGGTCAATATGGGCATGTCTGAAT TAAATTTGAACCTAATCATGATAAAGGATTTGAATTTGTTGACAACATTGTAGGTGGTAAAGTACCAAAAGAATATATTA AAGAAGTTGAAAACGGCTTGATTGAGGCATTAACATCAGGGCCAATTGCTGGTTATCAAACAATTGACGTTAAAGCAACT ATTTTTGATGGTTCATATCATGATGTTGATTCATCTGGTATGGCTTATAAAATTGCTGCATCTCTTGCTTTTAAAGAAGC AGCAAAAGTATGCAAACCAGTTTTATTAGAACCTATTATGTCAGTTGATGTAACTACACCTGATGATTATTTTGGGACGG TAATGGGCGATATTTCAAAACGTCGTGGTGTAATTGAAGGACAAGAACAACGTGGTAATGCACAAGCTATTAAAGCTAAA GTTCCGCTATCAGAAATGTTTGGATATGCAACGGATTTACGTTCAAATACACAAGGACGTGGTCAATATATTATGCAATT CAGTCACTATGCACAAGCACCTAAGTCTGTTACTGAAGAAGTAATGGTAGCACGTGCAAAAAAATAA
Upstream 100 bases:
>100_bases CAGCAATTAAGAAAAAAGAAGATACTCATAAAATGGCAGAAGCAAATAAAGCTTTTGCACACCTACGTTGATAAAATTTG TTTTAAGGAATTGTTAATAT
Downstream 100 bases:
>100_bases TTATTTTAACAATTAACAATAAAGTATTTAATTAATAATCTAAAAAGTTAAAATGTTATAATTATAAGGTATAATACCTT TTATTATGTATTCAAAAATT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSKELKLFRNFGIMAHIDAGKTTTSERILYHTGKNHKIGETHDGAATMDWMAQEKERGITITSAATYAKWKGHSLNLIDT PGHVDFTVEVERSLRVLDGAVAVLDGQNGVEPQTETVWRQATKYNVPRIVFVNKMDKTGADFYYSIETMKNRLGVKATAI QIPIGAEADFVGSIDLIEMKAYIYDGKADEEYKIEDIPADYLTKAQVMRSQMIDDVAVFDDEVMEKYLSGEELSHEDIKK CIRKGVISTELYPVLCGTAFKNKGVKKLLDAVVDFLPSPIDVPPIKGVDDHGNPIEYHNDPNEPFAALAFKVATDPFVGR LTYIRVYSGKLDKGTYIYNATKDKKERISRLVKMHSNNRDEIDSISAGDICAVIGLKDTTTGDTICDEKKPVILEQMVFA EPVISLSVEPKTKADQEKMSLALSKLAEEDPTFRTYTNEETGQTIIAGMGELHLDVLVDRMRREFNVQVNVGAPQVSYRE TFTEVADAEGKYIKQSGGRGQYGHVWIKFEPNHDKGFEFVDNIVGGKVPKEYIKEVENGLIEALTSGPIAGYQTIDVKAT IFDGSYHDVDSSGMAYKIAASLAFKEAAKVCKPVLLEPIMSVDVTTPDDYFGTVMGDISKRRGVIEGQEQRGNAQAIKAK VPLSEMFGYATDLRSNTQGRGQYIMQFSHYAQAPKSVTEEVMVARAKK
Sequences:
>Translated_688_residues MSKELKLFRNFGIMAHIDAGKTTTSERILYHTGKNHKIGETHDGAATMD*MAQEKERGITITSAATYAK*KGHSLNLIDT PGHVDFTVEVERSLRVLDGAVAVLDGQNGVEPQTETV*RQATKYNVPRIVFVNKMDKTGADFYYSIETMKNRLGVKATAI QIPIGAEADFVGSIDLIEMKAYIYDGKADEEYKIEDIPADYLTKAQVMRSQMIDDVAVFDDEVMEKYLSGEELSHEDIKK CIRKGVISTELYPVLCGTAFKNKGVKKLLDAVVDFLPSPIDVPPIKGVDDHGNPIEYHNDPNEPFAALAFKVATDPFVGR LTYIRVYSGKLDKGTYIYNATKDKKERISRLVKMHSNNRDEIDSISAGDICAVIGLKDTTTGDTICDEKKPVILEQMVFA EPVISLSVEPKTKADQEKMSLALSKLAEEDPTFRTYTNEETGQTIIAGMGELHLDVLVDRMRREFNVQVNVGAPQVSYRE TFTEVADAEGKYIKQSGGRGQYGHV*IKFEPNHDKGFEFVDNIVGGKVPKEYIKEVENGLIEALTSGPIAGYQTIDVKAT IFDGSYHDVDSSGMAYKIAASLAFKEAAKVCKPVLLEPIMSVDVTTPDDYFGTVMGDISKRRGVIEGQEQRGNAQAIKAK VPLSEMFGYATDLRSNTQGRGQYIMQFSHYAQAPKSVTEEVMVARAKK >Mature_687_residues SKELKLFRNFGIMAHIDAGKTTTSERILYHTGKNHKIGETHDGAATMD*MAQEKERGITITSAATYAK*KGHSLNLIDTP GHVDFTVEVERSLRVLDGAVAVLDGQNGVEPQTETV*RQATKYNVPRIVFVNKMDKTGADFYYSIETMKNRLGVKATAIQ IPIGAEADFVGSIDLIEMKAYIYDGKADEEYKIEDIPADYLTKAQVMRSQMIDDVAVFDDEVMEKYLSGEELSHEDIKKC IRKGVISTELYPVLCGTAFKNKGVKKLLDAVVDFLPSPIDVPPIKGVDDHGNPIEYHNDPNEPFAALAFKVATDPFVGRL TYIRVYSGKLDKGTYIYNATKDKKERISRLVKMHSNNRDEIDSISAGDICAVIGLKDTTTGDTICDEKKPVILEQMVFAE PVISLSVEPKTKADQEKMSLALSKLAEEDPTFRTYTNEETGQTIIAGMGELHLDVLVDRMRREFNVQVNVGAPQVSYRET FTEVADAEGKYIKQSGGRGQYGHV*IKFEPNHDKGFEFVDNIVGGKVPKEYIKEVENGLIEALTSGPIAGYQTIDVKATI FDGSYHDVDSSGMAYKIAASLAFKEAAKVCKPVLLEPIMSVDVTTPDDYFGTVMGDISKRRGVIEGQEQRGNAQAIKAKV PLSEMFGYATDLRSNTQGRGQYIMQFSHYAQAPKSVTEEVMVARAKK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=688, Percent_Identity=41.1337209302326, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI19923640, Length=706, Percent_Identity=37.5354107648725, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI25306283, Length=444, Percent_Identity=40.990990990991, Blast_Score=301, Evalue=2e-81, Organism=Homo sapiens, GI25306287, Length=283, Percent_Identity=48.4098939929329, Blast_Score=248, Evalue=2e-65, Organism=Homo sapiens, GI157426893, Length=542, Percent_Identity=25.4612546125461, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI4503483, Length=146, Percent_Identity=39.041095890411, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI94966754, Length=143, Percent_Identity=36.3636363636364, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI94966752, Length=88, Percent_Identity=36.3636363636364, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI310132016, Length=124, Percent_Identity=34.6774193548387, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI310110807, Length=124, Percent_Identity=34.6774193548387, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI310123363, Length=124, Percent_Identity=34.6774193548387, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1789738, Length=695, Percent_Identity=57.841726618705, Blast_Score=810, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=500, Percent_Identity=27, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI48994988, Length=484, Percent_Identity=26.0330578512397, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1788922, Length=159, Percent_Identity=39.622641509434, Blast_Score=95, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17533571, Length=682, Percent_Identity=39.7360703812317, Blast_Score=489, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17556745, Length=714, Percent_Identity=28.4313725490196, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17506493, Length=441, Percent_Identity=25.8503401360544, Blast_Score=109, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17557151, Length=146, Percent_Identity=42.4657534246575, Blast_Score=100, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17552882, Length=135, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323098, Length=692, Percent_Identity=43.2080924855491, Blast_Score=551, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322359, Length=775, Percent_Identity=31.8709677419355, Blast_Score=355, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6324707, Length=815, Percent_Identity=24.6625766871166, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320593, Length=815, Percent_Identity=24.6625766871166, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6323320, Length=143, Percent_Identity=38.4615384615385, Blast_Score=81, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324166, Length=145, Percent_Identity=36.551724137931, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24582462, Length=695, Percent_Identity=41.1510791366906, Blast_Score=542, Evalue=1e-154, Organism=Drosophila melanogaster, GI221458488, Length=727, Percent_Identity=32.4621733149931, Blast_Score=341, Evalue=8e-94, Organism=Drosophila melanogaster, GI78706572, Length=152, Percent_Identity=38.8157894736842, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24585711, Length=151, Percent_Identity=39.7350993377483, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24585713, Length=151, Percent_Identity=39.7350993377483, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24585709, Length=150, Percent_Identity=40, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI28574573, Length=139, Percent_Identity=35.2517985611511, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI21357743, Length=135, Percent_Identity=30.3703703703704, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75614; Mature: 75483
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKELKLFRNFGIMAHIDAGKTTTSERILYHTGKNHKIGETHDGAATMDMAQEKERGITI CCCHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEE TSAATYAKKGHSLNLIDTPGHVDFTVEVERSLRVLDGAVAVLDGQNGVEPQTETVRQATK EEHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH YNVPRIVFVNKMDKTGADFYYSIETMKNRLGVKATAIQIPIGAEADFVGSIDLIEMKAYI CCCCEEEEEECCCCCCCCEEEEHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEEE YDGKADEEYKIEDIPADYLTKAQVMRSQMIDDVAVFDDEVMEKYLSGEELSHEDIKKCIR ECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KGVISTELYPVLCGTAFKNKGVKKLLDAVVDFLPSPIDVPPIKGVDDHGNPIEYHNDPNE CCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFAALAFKVATDPFVGRLTYIRVYSGKLDKGTYIYNATKDKKERISRLVKMHSNNRDEID CHHHEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHC SISAGDICAVIGLKDTTTGDTICDEKKPVILEQMVFAEPVISLSVEPKTKADQEKMSLAL CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH SKLAEEDPTFRTYTNEETGQTIIAGMGELHLDVLVDRMRREFNVQVNVGAPQVSYRETFT HHHHCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH EVADAEGKYIKQSGGRGQYGHVIKFEPNHDKGFEFVDNIVGGKVPKEYIKEVENGLIEAL HHHCCCCCEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH TSGPIAGYQTIDVKATIFDGSYHDVDSSGMAYKIAASLAFKEAAKVCKPVLLEPIMSVDV HCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEC TTPDDYFGTVMGDISKRRGVIEGQEQRGNAQAIKAKVPLSEMFGYATDLRSNTQGRGQYI CCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHH MQFSHYAQAPKSVTEEVMVARAKK HHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure SKELKLFRNFGIMAHIDAGKTTTSERILYHTGKNHKIGETHDGAATMDMAQEKERGITI CCHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEE TSAATYAKKGHSLNLIDTPGHVDFTVEVERSLRVLDGAVAVLDGQNGVEPQTETVRQATK EEHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH YNVPRIVFVNKMDKTGADFYYSIETMKNRLGVKATAIQIPIGAEADFVGSIDLIEMKAYI CCCCEEEEEECCCCCCCCEEEEHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEEEEEE YDGKADEEYKIEDIPADYLTKAQVMRSQMIDDVAVFDDEVMEKYLSGEELSHEDIKKCIR ECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KGVISTELYPVLCGTAFKNKGVKKLLDAVVDFLPSPIDVPPIKGVDDHGNPIEYHNDPNE CCCCCCCHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PFAALAFKVATDPFVGRLTYIRVYSGKLDKGTYIYNATKDKKERISRLVKMHSNNRDEID CHHHEEEEECCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHC SISAGDICAVIGLKDTTTGDTICDEKKPVILEQMVFAEPVISLSVEPKTKADQEKMSLAL CCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH SKLAEEDPTFRTYTNEETGQTIIAGMGELHLDVLVDRMRREFNVQVNVGAPQVSYRETFT HHHHCCCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH EVADAEGKYIKQSGGRGQYGHVIKFEPNHDKGFEFVDNIVGGKVPKEYIKEVENGLIEAL HHHCCCCCEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH TSGPIAGYQTIDVKATIFDGSYHDVDSSGMAYKIAASLAFKEAAKVCKPVLLEPIMSVDV HCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEC TTPDDYFGTVMGDISKRRGVIEGQEQRGNAQAIKAKVPLSEMFGYATDLRSNTQGRGQYI CCCCHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCHHH MQFSHYAQAPKSVTEEVMVARAKK HHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA