Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
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Accession | NC_002162 |
Length | 751,719 |
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Identifier: 13358059
GI number: 13358059
Start: 608954
End: 611371
Strand: Reverse
Name: Not Available
Synonym: UU496
Alternate gene names: NA
Gene position: 611371-608954 (Counterclockwise)
Preceding gene: 13358061
Following gene: 13358058
Centisome position: 81.33
GC content: 24.98
Gene sequence:
>2418_bases ATGAATAATAAAAATAAAAAACGTAATGCCAAAATAGCTACTGGACTTACAATTAGTTCTTTAATTTGAGCTGGTGTAAT TACAGGAATTGTATTACGTTTCGCAAATCAGCATTCCAATCAAATTTTTAGTAAATACTATGAATATACAAAAGATGGTA ATTTAATTATTAAGGTTCGTTTATTTACAAGAGATAATGATATTAACCAAAAGATTTATGCGATTTTTAAAGATAAATTA GGCAAGGAAACTTCAGTTTTAATTACAAGAAATAAAGAAGTAGCACGAATTGACACAACGAGTTTAGGTTTGAATAATTC TTGAGTTTTAGATCGTATTGTTGATGAAAATAATAATACATTAATCAATAATAATGAGTTGGTATGGCAACAAAAAATAC TTGTCGATCGTCCTAATGTCTTTAAAGTTAATTTTAATAAAGAAGGCGATAAATTTTTTGAAATTAAATTAAACCATGAA TTGAGTAATCAGTATTTGACTGCGCATTTTATTAATCAAAATAATGCTAAATATATTCAAAATATTCAGGTTGATCATAA TGGTAATGTAATTGTTGGAACTAAACAACTACCTTTAGGAAATTTTTATAAATTCGTAGGTTTAACTTTAAAAGAAGATA ATAAAAACACAAAAATTGTTAATTTAGATGAAATTAGTGAACCCATTCGTGGTATTGATAAAACACGCAGTTTTGATGAT CAAGGAAACGTTATTATTAACGCACGTGTTTCACAAAATTTAGCTAATCAAAATATTAATGCCTTATTTGAAGATGAAAA ACACCAATTACACACTTTAAAGGCAATAGTTGGTACTGATGGTCTTGTGCGTTTATTAACAAAAGATTTAGAAAATCACC ATGATTATAAACTAATTCAAATTGTTGATAAGGATAATCATGATGTTATAAAACCTAATAAATTAGATGCGGCACATCAA AATATTGTCCATAAACCAAATAAAATAAAAATTGAAACTGATAAAAATGGTTTACAAAAAGCACTTCATATTCAAGTTGA TTCAAGTTTAAATGATCGATTATTAACACTTAGTTTTGAAAACGAAAACCACGATAAAACCAATATTATTGCTAAGGTTA ATAATGGTGAAATTACTGTAGATTTAAACAATTTAAAAGATGGACACTTATATAAACTAGATAATATTAGCATTAATAAT ACCTCTCCAGCAAAACGCGTTGCTAACTTAGATGATTTAAATGAAAGTGCTAAAACTATTAATAAATTAAACACTAATGC ATTAAATGATCCATATCATTATGATGATAAAGGGAATTTAATTTTTAATGCTAAAGTAGATTCTAAACAATTCGCTAATG ATCAAGTTGAAGCCGTGTTTATTGATGAAAAAAATAATGAACATAAAGTGTTGACAAAGGTTGATCTAAATGGCAATATT GTAATTAACACTTCTGATTTAAACTTAAATCATACATATAAACTAAAACATGTTATTAGTTTAGAAGAGCCAGAAACAAA TGTTTTAAATGATTATGAACTTGCAATTAATCAAAAAACAAAGTTTAGTAAACCAGCTGCGATTGTTGGGGCATTAGAAG ATAATAATTATAAAATTCAACTTTTAAACCCTGATTTAGCTAATAAGTCTGTTGTCTTAACTTTTGAAGATGAAAATCAT CATCCTTATCAATTAACTGGTAAATTAAATGATCAACAAGAATTAATTTTAAGAACAAATGATGATCATTTACTACCTAA TAATCACACTTATACATTGACTAAAATTACTAATGTTAATAATCAACCAATCGTTAATGTTAATGATTTAGATAGAAAAG ATAGATTATTAGAAAAAGTCGATGTAAATAAATTACAACAATTAAATACATACACCTATGATGATTTAGGAAATTTAATT ATTGACATTAATGATAATTTAAATAAAATAACAACTCAAGATGCTGTTGCTCATTTTATTGATGAAAATAATAAAGATTA TTTTGTTCCTACTAAAGTTGATTTAAATAAGAATAAAATAAGTATTAACACAAAAGATTTAGATGCAAACCACCACTATC AATTGTTAAATATTGTTGATAAAAACAAGCATGAGCAAATTTTATTAAATTCAAACGAAATTAATCCTTTAAACAGAATT AGCATTATTAAACCACTTGCAATTATTAAACAAGATGCAAATAAAAATTTAAACCTACTAACTTTTGATAAGAATTTGTT TAATCGTTCATTAGATGCAACTTTTATTGATGAAAATCAAAAAGAATATCATGTTAAAGCAAAAACTATTATTGATTCAT TAGGTCAAACACGATTTATAACTAGTGATGAGGTTTTACCTAACCATCATAAATATCAACTAATTGCTCTTAAATATGAT GGTCAAAAAAGTAATTAA
Upstream 100 bases:
>100_bases AATTTGTGTAGTTTAACAGTTTACACAAAATAAATTAGTTTTTTTTTTTTTTTTTTAAACTGAAAAACAGGAAAATTTTA TAAAAAAGAGATGATTATTT
Downstream 100 bases:
>100_bases TGTTGCTGATTTGGATCAAAAACAAATTATTGTTAACAAACTAAATATTGGTAAAATTGTTAATAACCAATTAGTTTTTG ATGTGCCAAAAAATGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 805; Mature: 805
Protein sequence:
>805_residues MNNKNKKRNAKIATGLTISSLIWAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL GKETSVLITRNKEVARIDTTSLGLNNSWVLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD GQKSN
Sequences:
>Translated_805_residues MNNKNKKRNAKIATGLTISSLI*AGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL GKETSVLITRNKEVARIDTTSLGLNNS*VLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD GQKSN >Mature_805_residues MNNKNKKRNAKIATGLTISSLI*AGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL GKETSVLITRNKEVARIDTTSLGLNNS*VLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD GQKSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91843; Mature: 91843
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKNKKRNAKIATGLTISSLIAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRL CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE FTRDNDINQKIYAIFKDKLGKETSVLITRNKEVARIDTTSLGLNNSVLDRIVDENNNTLI EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCEEE NNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHELSNQYLTAHFINQNNAKYIQNI ECCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE QVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDDQG EEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHCCCCCCCC NVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIV CEEEEEEHHCCHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE DKDNHDVIKPNKLDAAHQNIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENE ECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC NHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINNTSPAKRVANLDDLNESAKTINK CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCEEECCCCHHHHHCCHHHCCHHHHHHHH LNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNIVI CCCCCCCCCCEECCCCCEEEEEECCCHHCCCCCEEEEEEECCCCCCEEEEEEECCCCEEE NTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLL EECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEE NPDLANKSVVLTFEDENHHPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQ CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEECCCCCEEEEEEEECCCCC PIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLIIDINDNLNKITTQDAVAHFIDE CEEECCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCC NNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRISI CCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHH IKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITS HHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEECCCCCEEEEHHHHHHHHCCCEEEEEC DEVLPNHHKYQLIALKYDGQKSN CCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MNNKNKKRNAKIATGLTISSLIAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRL CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE FTRDNDINQKIYAIFKDKLGKETSVLITRNKEVARIDTTSLGLNNSVLDRIVDENNNTLI EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCEEE NNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHELSNQYLTAHFINQNNAKYIQNI ECCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE QVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDDQG EEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHCCCCCCCC NVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIV CEEEEEEHHCCHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE DKDNHDVIKPNKLDAAHQNIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENE ECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC NHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINNTSPAKRVANLDDLNESAKTINK CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCEEECCCCHHHHHCCHHHCCHHHHHHHH LNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNIVI CCCCCCCCCCEECCCCCEEEEEECCCHHCCCCCEEEEEEECCCCCCEEEEEEECCCCEEE NTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLL EECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEE NPDLANKSVVLTFEDENHHPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQ CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEECCCCCEEEEEEEECCCCC PIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLIIDINDNLNKITTQDAVAHFIDE CEEECCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCC NNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRISI CCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHH IKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITS HHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEECCCCCEEEEHHHHHHHHCCCEEEEEC DEVLPNHHKYQLIALKYDGQKSN CCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA