Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13358059

GI number: 13358059

Start: 608954

End: 611371

Strand: Reverse

Name: Not Available

Synonym: UU496

Alternate gene names: NA

Gene position: 611371-608954 (Counterclockwise)

Preceding gene: 13358061

Following gene: 13358058

Centisome position: 81.33

GC content: 24.98

Gene sequence:

>2418_bases
ATGAATAATAAAAATAAAAAACGTAATGCCAAAATAGCTACTGGACTTACAATTAGTTCTTTAATTTGAGCTGGTGTAAT
TACAGGAATTGTATTACGTTTCGCAAATCAGCATTCCAATCAAATTTTTAGTAAATACTATGAATATACAAAAGATGGTA
ATTTAATTATTAAGGTTCGTTTATTTACAAGAGATAATGATATTAACCAAAAGATTTATGCGATTTTTAAAGATAAATTA
GGCAAGGAAACTTCAGTTTTAATTACAAGAAATAAAGAAGTAGCACGAATTGACACAACGAGTTTAGGTTTGAATAATTC
TTGAGTTTTAGATCGTATTGTTGATGAAAATAATAATACATTAATCAATAATAATGAGTTGGTATGGCAACAAAAAATAC
TTGTCGATCGTCCTAATGTCTTTAAAGTTAATTTTAATAAAGAAGGCGATAAATTTTTTGAAATTAAATTAAACCATGAA
TTGAGTAATCAGTATTTGACTGCGCATTTTATTAATCAAAATAATGCTAAATATATTCAAAATATTCAGGTTGATCATAA
TGGTAATGTAATTGTTGGAACTAAACAACTACCTTTAGGAAATTTTTATAAATTCGTAGGTTTAACTTTAAAAGAAGATA
ATAAAAACACAAAAATTGTTAATTTAGATGAAATTAGTGAACCCATTCGTGGTATTGATAAAACACGCAGTTTTGATGAT
CAAGGAAACGTTATTATTAACGCACGTGTTTCACAAAATTTAGCTAATCAAAATATTAATGCCTTATTTGAAGATGAAAA
ACACCAATTACACACTTTAAAGGCAATAGTTGGTACTGATGGTCTTGTGCGTTTATTAACAAAAGATTTAGAAAATCACC
ATGATTATAAACTAATTCAAATTGTTGATAAGGATAATCATGATGTTATAAAACCTAATAAATTAGATGCGGCACATCAA
AATATTGTCCATAAACCAAATAAAATAAAAATTGAAACTGATAAAAATGGTTTACAAAAAGCACTTCATATTCAAGTTGA
TTCAAGTTTAAATGATCGATTATTAACACTTAGTTTTGAAAACGAAAACCACGATAAAACCAATATTATTGCTAAGGTTA
ATAATGGTGAAATTACTGTAGATTTAAACAATTTAAAAGATGGACACTTATATAAACTAGATAATATTAGCATTAATAAT
ACCTCTCCAGCAAAACGCGTTGCTAACTTAGATGATTTAAATGAAAGTGCTAAAACTATTAATAAATTAAACACTAATGC
ATTAAATGATCCATATCATTATGATGATAAAGGGAATTTAATTTTTAATGCTAAAGTAGATTCTAAACAATTCGCTAATG
ATCAAGTTGAAGCCGTGTTTATTGATGAAAAAAATAATGAACATAAAGTGTTGACAAAGGTTGATCTAAATGGCAATATT
GTAATTAACACTTCTGATTTAAACTTAAATCATACATATAAACTAAAACATGTTATTAGTTTAGAAGAGCCAGAAACAAA
TGTTTTAAATGATTATGAACTTGCAATTAATCAAAAAACAAAGTTTAGTAAACCAGCTGCGATTGTTGGGGCATTAGAAG
ATAATAATTATAAAATTCAACTTTTAAACCCTGATTTAGCTAATAAGTCTGTTGTCTTAACTTTTGAAGATGAAAATCAT
CATCCTTATCAATTAACTGGTAAATTAAATGATCAACAAGAATTAATTTTAAGAACAAATGATGATCATTTACTACCTAA
TAATCACACTTATACATTGACTAAAATTACTAATGTTAATAATCAACCAATCGTTAATGTTAATGATTTAGATAGAAAAG
ATAGATTATTAGAAAAAGTCGATGTAAATAAATTACAACAATTAAATACATACACCTATGATGATTTAGGAAATTTAATT
ATTGACATTAATGATAATTTAAATAAAATAACAACTCAAGATGCTGTTGCTCATTTTATTGATGAAAATAATAAAGATTA
TTTTGTTCCTACTAAAGTTGATTTAAATAAGAATAAAATAAGTATTAACACAAAAGATTTAGATGCAAACCACCACTATC
AATTGTTAAATATTGTTGATAAAAACAAGCATGAGCAAATTTTATTAAATTCAAACGAAATTAATCCTTTAAACAGAATT
AGCATTATTAAACCACTTGCAATTATTAAACAAGATGCAAATAAAAATTTAAACCTACTAACTTTTGATAAGAATTTGTT
TAATCGTTCATTAGATGCAACTTTTATTGATGAAAATCAAAAAGAATATCATGTTAAAGCAAAAACTATTATTGATTCAT
TAGGTCAAACACGATTTATAACTAGTGATGAGGTTTTACCTAACCATCATAAATATCAACTAATTGCTCTTAAATATGAT
GGTCAAAAAAGTAATTAA

Upstream 100 bases:

>100_bases
AATTTGTGTAGTTTAACAGTTTACACAAAATAAATTAGTTTTTTTTTTTTTTTTTTAAACTGAAAAACAGGAAAATTTTA
TAAAAAAGAGATGATTATTT

Downstream 100 bases:

>100_bases
TGTTGCTGATTTGGATCAAAAACAAATTATTGTTAACAAACTAAATATTGGTAAAATTGTTAATAACCAATTAGTTTTTG
ATGTGCCAAAAAATGTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 805; Mature: 805

Protein sequence:

>805_residues
MNNKNKKRNAKIATGLTISSLIWAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL
GKETSVLITRNKEVARIDTTSLGLNNSWVLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE
LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD
QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ
NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN
TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI
VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH
HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI
IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI
SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD
GQKSN

Sequences:

>Translated_805_residues
MNNKNKKRNAKIATGLTISSLI*AGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL
GKETSVLITRNKEVARIDTTSLGLNNS*VLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE
LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD
QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ
NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN
TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI
VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH
HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI
IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI
SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD
GQKSN
>Mature_805_residues
MNNKNKKRNAKIATGLTISSLI*AGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRLFTRDNDINQKIYAIFKDKL
GKETSVLITRNKEVARIDTTSLGLNNS*VLDRIVDENNNTLINNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHE
LSNQYLTAHFINQNNAKYIQNIQVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDD
QGNVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIVDKDNHDVIKPNKLDAAHQ
NIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENENHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINN
TSPAKRVANLDDLNESAKTINKLNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNI
VINTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLLNPDLANKSVVLTFEDENH
HPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQPIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLI
IDINDNLNKITTQDAVAHFIDENNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRI
SIIKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITSDEVLPNHHKYQLIALKYD
GQKSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91843; Mature: 91843

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.1 %Met     (Translated Protein)
0.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
0.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKNKKRNAKIATGLTISSLIAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE
FTRDNDINQKIYAIFKDKLGKETSVLITRNKEVARIDTTSLGLNNSVLDRIVDENNNTLI
EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCEEE
NNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHELSNQYLTAHFINQNNAKYIQNI
ECCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE
QVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDDQG
EEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHCCCCCCCC
NVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIV
CEEEEEEHHCCHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE
DKDNHDVIKPNKLDAAHQNIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENE
ECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC
NHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINNTSPAKRVANLDDLNESAKTINK
CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCEEECCCCHHHHHCCHHHCCHHHHHHHH
LNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNIVI
CCCCCCCCCCEECCCCCEEEEEECCCHHCCCCCEEEEEEECCCCCCEEEEEEECCCCEEE
NTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLL
EECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEE
NPDLANKSVVLTFEDENHHPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQ
CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEECCCCCEEEEEEEECCCCC
PIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLIIDINDNLNKITTQDAVAHFIDE
CEEECCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCC
NNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRISI
CCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHH
IKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITS
HHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEECCCCCEEEEHHHHHHHHCCCEEEEEC
DEVLPNHHKYQLIALKYDGQKSN
CCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MNNKNKKRNAKIATGLTISSLIAGVITGIVLRFANQHSNQIFSKYYEYTKDGNLIIKVRL
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE
FTRDNDINQKIYAIFKDKLGKETSVLITRNKEVARIDTTSLGLNNSVLDRIVDENNNTLI
EECCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHCCCCCEEE
NNNELVWQQKILVDRPNVFKVNFNKEGDKFFEIKLNHELSNQYLTAHFINQNNAKYIQNI
ECCEEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEE
QVDHNGNVIVGTKQLPLGNFYKFVGLTLKEDNKNTKIVNLDEISEPIRGIDKTRSFDDQG
EEECCCCEEEEECCCCCCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHCCCCCCCC
NVIINARVSQNLANQNINALFEDEKHQLHTLKAIVGTDGLVRLLTKDLENHHDYKLIQIV
CEEEEEEHHCCHHCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEE
DKDNHDVIKPNKLDAAHQNIVHKPNKIKIETDKNGLQKALHIQVDSSLNDRLLTLSFENE
ECCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCC
NHDKTNIIAKVNNGEITVDLNNLKDGHLYKLDNISINNTSPAKRVANLDDLNESAKTINK
CCCCEEEEEEECCCEEEEEECCCCCCCEEEECCEEECCCCHHHHHCCHHHCCHHHHHHHH
LNTNALNDPYHYDDKGNLIFNAKVDSKQFANDQVEAVFIDEKNNEHKVLTKVDLNGNIVI
CCCCCCCCCCEECCCCCEEEEEECCCHHCCCCCEEEEEEECCCCCCEEEEEEECCCCEEE
NTSDLNLNHTYKLKHVISLEEPETNVLNDYELAINQKTKFSKPAAIVGALEDNNYKIQLL
EECCCCCCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEEEE
NPDLANKSVVLTFEDENHHPYQLTGKLNDQQELILRTNDDHLLPNNHTYTLTKITNVNNQ
CCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEEECCCEECCCCCEEEEEEEECCCCC
PIVNVNDLDRKDRLLEKVDVNKLQQLNTYTYDDLGNLIIDINDNLNKITTQDAVAHFIDE
CEEECCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHCC
NNKDYFVPTKVDLNKNKISINTKDLDANHHYQLLNIVDKNKHEQILLNSNEINPLNRISI
CCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHHHH
IKPLAIIKQDANKNLNLLTFDKNLFNRSLDATFIDENQKEYHVKAKTIIDSLGQTRFITS
HHHHHHHHHCCCCCCEEEEECHHHHCCCCCEEEECCCCCEEEEHHHHHHHHCCCEEEEEC
DEVLPNHHKYQLIALKYDGQKSN
CCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA