Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 13358036

GI number: 13358036

Start: 537638

End: 539965

Strand: Direct

Name: Not Available

Synonym: UU473

Alternate gene names: NA

Gene position: 537638-539965 (Clockwise)

Preceding gene: 13358035

Following gene: 13358037

Centisome position: 71.52

GC content: 25.99

Gene sequence:

>2328_bases
ATGAAATCAAATAATAAAAATTACAAATTTTTGAACATAAAAAAACGGAAATATCGCATTTTTTTTATGTTGTGTTCTTT
AAATTTAATATGAGCAGGCGTTATTATAGCTATTGTTCTGCGTTTAAAAAATATTGATAAACGCTTTAGTGAAAATGACC
ATAAAATTGCTCGTCCAACTTGAGAGTATGATAATGATGGAAATTTAGAGATTCACACTCAATTAGCAAATGATTTAAAT
GATGATTTAAAACAAAAAGCTTTAAATAATGCAAATGTCAAAGGAATTGTTGTTGACCAAAATGGTGTAGAACATGAGAT
AGATGTAAGTATTGATGCTAATGGTAAGGTTATTATTCCAACAAAAGATTTAGTAAATAATGACCCAACTAAACCTAATA
TATACACACTTAAAAAAGTCGTTTTAAAACAACATAATCAACCAAATATTGATCTAATTAGTGAAGAGCAATTAAGTGGT
GATAATCATATTTCATTTAAAAAACCAACAGTGGTTGCTCAAATTAATGATAACAATGATTATATAATGCATTTTACGAA
TCCTAATTTAGTTAACAAGAAAATTAAATTAACATTTAAAGTTGATGATCAAGATGATCATACAAAAACCATTGAAGCTA
TCATTGGATTAGATGGAAAGGCTATTTTTAAAACAAGTGATGATGCAATTTTTGCACCAGATCATAAATATACACTAACA
AAAATTGAAGCTAATAACAAAAAAGTTGCTAACATTGATGAAATTCCATTAAAAAATAGAATCGTTGATAAAAATCCAAT
TAAAAGAATTAACTTAACACAACTAAAAGTTGCTAAAGATTTAATTCTTTGAAATAATACAAACCAAAACCAATTCATAA
CTGCTACTTTTAAAAATATAAATAACGATTTTGATGATTATATTGTTAAATTAATTTATGAATACAATTATCGTGGAGAA
ATGAAAGAAATTGCATCACAACCTTTCAAATTAGAAAAAAATAAAACAACATACAACAATATCCTTTTGCCAATTAGTAT
TCCAAATCGCTTATATCATTTTAAAAAAGTAGTAATTCAAAAATTAAATCAACCAAATAAATCTATTGATTTAGATCATG
ATCCAAATTTAAAATCTTTTTTTATTGTTGGTCCTGGTAAAACAGATTTTGCATGAAAAAAACCAAATGATGATCAAATT
ACATATGATGGTTTAAAGAGATTAAATATTGAAATTACTTCTCAAGATTATGCATTACAAAATGGTAAAAAAGTTATGGT
TTGGTTTAAATCAGATGCCGAACCAAATAATGATTCACTTAAATTTATAGGCGAATTATCTCAAACTAACGCCAATGGAA
CAGCTGCTGTCATTAATAATTTAAATAATTTATACGGTATGAAAGAACAAACAGAGTATTACATCTATAAAATTCAGTTC
ATAGATGAATTAGAATATTCAAAATTACCACCAAACCGTAATAACATTGTTTATGAATATAATAAAAATATTGCACGTAA
TTATGCATTCCGAACTAAAACTGCCCCTTTAATTTTAGAAAAAATAGAAAAAGATGATAATGGTAGCATTGGAGGACAAA
ATTTTTATTTTTACCTAAATAAAGCTAGTGATGATCCTAGTACAATCAAGCAAGTTACTATATATTGTCGTGATAATAAT
AATGAATTATATACTTCTGATGATCAAGAAATAGATTCTGTTGATCTTGTATATCATTCTTGAATTCATGATTTAAAATG
AAATCGTGAATATGTTTTTGATCATGCTGAAATACAAACAACATATCCTGATGATCCTGAATATGGTGGTGAAACAAATG
ATTTAGAAATTAAAAGAGGATTAACTTTCAAGTTTTATACACCACCAAGTAAAACAGAAATACAGTGAAAACATCCTATA
AAAATAACTAATAATGGGGCAATTTTAGATATTCAATTACAATCAAAAGATCGGGCATTTGAAGATAAGCAAAAATATCG
AGTGACATTAGTTGAAGCTGAAAATCAAAACAATGCTGTTGTTGGTGACTTTTTACTTGCTGGCACTTCTATTAATAAAA
ATGATAGCCCAATTGGTGATAATAATGATAAGAACAAAGATATAGCAACTTTGAGCTGTAATTTTGAAAACAAATTAAAA
AAAGGGACTAAATACTTATTAAAAGAAGTTCGATTTATTGCTAATCCAAATGAAGAAATTAGTGCTAAACCTACTAGAGC
TGCTAGACCATTTAATAATGATAATATTATTTATAGTTTGAATCTACGAATAAATGATCCCTATGACTTTACAACTTTAA
AAAATTAG

Upstream 100 bases:

>100_bases
ATTAAAACATTATTGTTTTTTTTTTTTTTTTGAAAAAATAATGAGTAAATAAATGTTTTGTTTTTATCTGTTTATTTTAT
AAAAATGTGGGAAAAATTAT

Downstream 100 bases:

>100_bases
TTTAATCCTTAAATTTTTAGTTATATATATATATATATATATATGAAAGTAAATAAAATAATTATGAAAAAAAGAGTTAA
TAAAATATATAAACACAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 775; Mature: 775

Protein sequence:

>775_residues
MKSNNKNYKFLNIKKRKYRIFFMLCSLNLIWAGVIIAIVLRLKNIDKRFSENDHKIARPTWEYDNDGNLEIHTQLANDLN
DDLKQKALNNANVKGIVVDQNGVEHEIDVSIDANGKVIIPTKDLVNNDPTKPNIYTLKKVVLKQHNQPNIDLISEEQLSG
DNHISFKKPTVVAQINDNNDYIMHFTNPNLVNKKIKLTFKVDDQDDHTKTIEAIIGLDGKAIFKTSDDAIFAPDHKYTLT
KIEANNKKVANIDEIPLKNRIVDKNPIKRINLTQLKVAKDLILWNNTNQNQFITATFKNINNDFDDYIVKLIYEYNYRGE
MKEIASQPFKLEKNKTTYNNILLPISIPNRLYHFKKVVIQKLNQPNKSIDLDHDPNLKSFFIVGPGKTDFAWKKPNDDQI
TYDGLKRLNIEITSQDYALQNGKKVMVWFKSDAEPNNDSLKFIGELSQTNANGTAAVINNLNNLYGMKEQTEYYIYKIQF
IDELEYSKLPPNRNNIVYEYNKNIARNYAFRTKTAPLILEKIEKDDNGSIGGQNFYFYLNKASDDPSTIKQVTIYCRDNN
NELYTSDDQEIDSVDLVYHSWIHDLKWNREYVFDHAEIQTTYPDDPEYGGETNDLEIKRGLTFKFYTPPSKTEIQWKHPI
KITNNGAILDIQLQSKDRAFEDKQKYRVTLVEAENQNNAVVGDFLLAGTSINKNDSPIGDNNDKNKDIATLSCNFENKLK
KGTKYLLKEVRFIANPNEEISAKPTRAARPFNNDNIIYSLNLRINDPYDFTTLKN

Sequences:

>Translated_775_residues
MKSNNKNYKFLNIKKRKYRIFFMLCSLNLI*AGVIIAIVLRLKNIDKRFSENDHKIARPT*EYDNDGNLEIHTQLANDLN
DDLKQKALNNANVKGIVVDQNGVEHEIDVSIDANGKVIIPTKDLVNNDPTKPNIYTLKKVVLKQHNQPNIDLISEEQLSG
DNHISFKKPTVVAQINDNNDYIMHFTNPNLVNKKIKLTFKVDDQDDHTKTIEAIIGLDGKAIFKTSDDAIFAPDHKYTLT
KIEANNKKVANIDEIPLKNRIVDKNPIKRINLTQLKVAKDLIL*NNTNQNQFITATFKNINNDFDDYIVKLIYEYNYRGE
MKEIASQPFKLEKNKTTYNNILLPISIPNRLYHFKKVVIQKLNQPNKSIDLDHDPNLKSFFIVGPGKTDFA*KKPNDDQI
TYDGLKRLNIEITSQDYALQNGKKVMVWFKSDAEPNNDSLKFIGELSQTNANGTAAVINNLNNLYGMKEQTEYYIYKIQF
IDELEYSKLPPNRNNIVYEYNKNIARNYAFRTKTAPLILEKIEKDDNGSIGGQNFYFYLNKASDDPSTIKQVTIYCRDNN
NELYTSDDQEIDSVDLVYHS*IHDLK*NREYVFDHAEIQTTYPDDPEYGGETNDLEIKRGLTFKFYTPPSKTEIQ*KHPI
KITNNGAILDIQLQSKDRAFEDKQKYRVTLVEAENQNNAVVGDFLLAGTSINKNDSPIGDNNDKNKDIATLSCNFENKLK
KGTKYLLKEVRFIANPNEEISAKPTRAARPFNNDNIIYSLNLRINDPYDFTTLKN
>Mature_775_residues
MKSNNKNYKFLNIKKRKYRIFFMLCSLNLI*AGVIIAIVLRLKNIDKRFSENDHKIARPT*EYDNDGNLEIHTQLANDLN
DDLKQKALNNANVKGIVVDQNGVEHEIDVSIDANGKVIIPTKDLVNNDPTKPNIYTLKKVVLKQHNQPNIDLISEEQLSG
DNHISFKKPTVVAQINDNNDYIMHFTNPNLVNKKIKLTFKVDDQDDHTKTIEAIIGLDGKAIFKTSDDAIFAPDHKYTLT
KIEANNKKVANIDEIPLKNRIVDKNPIKRINLTQLKVAKDLIL*NNTNQNQFITATFKNINNDFDDYIVKLIYEYNYRGE
MKEIASQPFKLEKNKTTYNNILLPISIPNRLYHFKKVVIQKLNQPNKSIDLDHDPNLKSFFIVGPGKTDFA*KKPNDDQI
TYDGLKRLNIEITSQDYALQNGKKVMVWFKSDAEPNNDSLKFIGELSQTNANGTAAVINNLNNLYGMKEQTEYYIYKIQF
IDELEYSKLPPNRNNIVYEYNKNIARNYAFRTKTAPLILEKIEKDDNGSIGGQNFYFYLNKASDDPSTIKQVTIYCRDNN
NELYTSDDQEIDSVDLVYHS*IHDLK*NREYVFDHAEIQTTYPDDPEYGGETNDLEIKRGLTFKFYTPPSKTEIQ*KHPI
KITNNGAILDIQLQSKDRAFEDKQKYRVTLVEAENQNNAVVGDFLLAGTSINKNDSPIGDNNDKNKDIATLSCNFENKLK
KGTKYLLKEVRFIANPNEEISAKPTRAARPFNNDNIIYSLNLRINDPYDFTTLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88160; Mature: 88160

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNNKNYKFLNIKKRKYRIFFMLCSLNLIAGVIIAIVLRLKNIDKRFSENDHKIARPTE
CCCCCCCEEEEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YDNDGNLEIHTQLANDLNDDLKQKALNNANVKGIVVDQNGVEHEIDVSIDANGKVIIPTK
CCCCCCEEEEEEHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECH
DLVNNDPTKPNIYTLKKVVLKQHNQPNIDLISEEQLSGDNHISFKKPTVVAQINDNNDYI
HHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHCCCCCEEEEECCEEEEEEECCCCEE
MHFTNPNLVNKKIKLTFKVDDQDDHTKTIEAIIGLDGKAIFKTSDDAIFAPDHKYTLTKI
EEECCCCEECEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCEECCCCCEEEEEE
EANNKKVANIDEIPLKNRIVDKNPIKRINLTQLKVAKDLILNNTNQNQFITATFKNINND
ECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
FDDYIVKLIYEYNYRGEMKEIASQPFKLEKNKTTYNNILLPISIPNRLYHFKKVVIQKLN
HHHHHHEEHEECCCCCCHHHHHCCCEEEECCCCEECCEEEEEECCHHHHHHHHHHHHHHC
QPNKSIDLDHDPNLKSFFIVGPGKTDFAKKPNDDQITYDGLKRLNIEITSQDYALQNGKK
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEEEEECCCEEECCCCE
VMVWFKSDAEPNNDSLKFIGELSQTNANGTAAVINNLNNLYGMKEQTEYYIYKIQFIDEL
EEEEEECCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
EYSKLPPNRNNIVYEYNKNIARNYAFRTKTAPLILEKIEKDDNGSIGGQNFYFYLNKASD
CCCCCCCCCCCEEEEECCCCHHHEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCC
DPSTIKQVTIYCRDNNNELYTSDDQEIDSVDLVYHSIHDLKNREYVFDHAEIQTTYPDDP
CCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECEEEEEECCCCC
EYGGETNDLEIKRGLTFKFYTPPSKTEIQKHPIKITNNGAILDIQLQSKDRAFEDKQKYR
CCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEE
VTLVEAENQNNAVVGDFLLAGTSINKNDSPIGDNNDKNKDIATLSCNFENKLKKGTKYLL
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH
KEVRFIANPNEEISAKPTRAARPFNNDNIIYSLNLRINDPYDFTTLKN
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEECCC
>Mature Secondary Structure
MKSNNKNYKFLNIKKRKYRIFFMLCSLNLIAGVIIAIVLRLKNIDKRFSENDHKIARPTE
CCCCCCCEEEEEEECCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YDNDGNLEIHTQLANDLNDDLKQKALNNANVKGIVVDQNGVEHEIDVSIDANGKVIIPTK
CCCCCCEEEEEEHHHCCHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEECH
DLVNNDPTKPNIYTLKKVVLKQHNQPNIDLISEEQLSGDNHISFKKPTVVAQINDNNDYI
HHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEHHHCCCCCEEEEECCEEEEEEECCCCEE
MHFTNPNLVNKKIKLTFKVDDQDDHTKTIEAIIGLDGKAIFKTSDDAIFAPDHKYTLTKI
EEECCCCEECEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCEECCCCCEEEEEE
EANNKKVANIDEIPLKNRIVDKNPIKRINLTQLKVAKDLILNNTNQNQFITATFKNINND
ECCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
FDDYIVKLIYEYNYRGEMKEIASQPFKLEKNKTTYNNILLPISIPNRLYHFKKVVIQKLN
HHHHHHEEHEECCCCCCHHHHHCCCEEEECCCCEECCEEEEEECCHHHHHHHHHHHHHHC
QPNKSIDLDHDPNLKSFFIVGPGKTDFAKKPNDDQITYDGLKRLNIEITSQDYALQNGKK
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEEEEECCCEEECCCCE
VMVWFKSDAEPNNDSLKFIGELSQTNANGTAAVINNLNNLYGMKEQTEYYIYKIQFIDEL
EEEEEECCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
EYSKLPPNRNNIVYEYNKNIARNYAFRTKTAPLILEKIEKDDNGSIGGQNFYFYLNKASD
CCCCCCCCCCCEEEEECCCCHHHEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCC
DPSTIKQVTIYCRDNNNELYTSDDQEIDSVDLVYHSIHDLKNREYVFDHAEIQTTYPDDP
CCCCEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECEEEEEECCCCC
EYGGETNDLEIKRGLTFKFYTPPSKTEIQKHPIKITNNGAILDIQLQSKDRAFEDKQKYR
CCCCCCCCEEEECCCEEEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEE
VTLVEAENQNNAVVGDFLLAGTSINKNDSPIGDNNDKNKDIATLSCNFENKLKKGTKYLL
EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHH
KEVRFIANPNEEISAKPTRAARPFNNDNIIYSLNLRINDPYDFTTLKN
HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA