| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13358031
GI number: 13358031
Start: 533999
End: 535084
Strand: Direct
Name: Not Available
Synonym: UU468
Alternate gene names: 13358031
Gene position: 533999-535084 (Clockwise)
Preceding gene: 13358030
Following gene: 13358032
Centisome position: 71.04
GC content: 23.94
Gene sequence:
>1086_bases ATGATAACAAATAAAAAATGTAAAGGCTGTGGAGCTTTTTTGAATGATCAAATCAATACAATTGGATATACCCCAAAAAT AAATGAAACAAAAACCAATTTATGCCAACGTTGTTTTAAATTAATACACTATAATAAACTTGAAAAAGTAAGTACTAATT TAAATCAAAGTATTAAAGAGACAATTAACACTTTAAATTTTAGTAATTTACAGATTTTTGCTGTATTAGATATTTTAGAT TTAGAACACACAATTATTGATGAACTAAAAGAATATCAAAATAAAATTATTTTTTTAGTTAATAAAATTGATTTATTACC TCAGCGCTACAATAGTGAATTAGTTAATGAAAATGTTGTTAAAACACTTATTAATCATGGATTTATTGATCCTAAAATTA TCTATGTTTCCACACATTCTAATACCAGTTTAAAAAAAGTTATGGATTATATTAAAAATGCAACTAATAAAAAACAAAAA TCCATTTTTTTTGGAAAATCAAATGTTGGTAAATCAAGTTTAATCAATGCTTTATTAGCGCTAAATAAAATTAAAACTAA ACTTACAATTAGTAGTTATACTAATACAACAATTAATTTAAATAAAATTAATATACAAGAACATCAAATACTTGATGCTC CCGGAGTTTGTTTTGATGAAAACATTTTAAATTATGTACGTGATGAAGATAATAAATCAATCATGATTTCTTATGGTGCT AAAGCAATTAATTACCAAATTAATCCCCAACAAGCTCTTATGATTTCTGGATTGGTTGGAATTCAGTATTTAAAGGGTCA AAAAACAACTTTTACATTATATGTTTCATCCCAATTAGATATTCATCGTTGTAAATTAGAAAATTTTATAATGAATTTTA ATAAACGATATTTATTAGCGAAGTTCAATTATCTAAATCAAGATCTTGAATTTGTTGACCATCTAATAACTTTAAATAAG GATCAAAAAACCAATATTTGTATTGCAGGCCTAGGTTTGTTAGTTATTAATGCTCATGCTGAACAAATATGTATCCGTTT ACCAAAAAGTGTTGGTCTAAAAGTAGCAAAATATGCGATTATTTAA
Upstream 100 bases:
>100_bases ATATGTACGCAAATGAATTTGATAATGAAATGCTAAAAATTAATAAAAATCACGATGATTCACAATTAGAATTAATTGAT GAAGAGGAAGAAAAAAAATA
Downstream 100 bases:
>100_bases TTATTATTAATAAAGAGAGATTTGTTATGAAAATCATTTTGTTTTGTGGAGCTTTTGATATGGTTCACAATGCTCATATT GCAATGGCTAAACAAGCCAT
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MITNKKCKGCGAFLNDQINTIGYTPKINETKTNLCQRCFKLIHYNKLEKVSTNLNQSIKETINTLNFSNLQIFAVLDILD LEHTIIDELKEYQNKIIFLVNKIDLLPQRYNSELVNENVVKTLINHGFIDPKIIYVSTHSNTSLKKVMDYIKNATNKKQK SIFFGKSNVGKSSLINALLALNKIKTKLTISSYTNTTINLNKINIQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA KAINYQINPQQALMISGLVGIQYLKGQKTTFTLYVSSQLDIHRCKLENFIMNFNKRYLLAKFNYLNQDLEFVDHLITLNK DQKTNICIAGLGLLVINAHAEQICIRLPKSVGLKVAKYAII
Sequences:
>Translated_361_residues MITNKKCKGCGAFLNDQINTIGYTPKINETKTNLCQRCFKLIHYNKLEKVSTNLNQSIKETINTLNFSNLQIFAVLDILD LEHTIIDELKEYQNKIIFLVNKIDLLPQRYNSELVNENVVKTLINHGFIDPKIIYVSTHSNTSLKKVMDYIKNATNKKQK SIFFGKSNVGKSSLINALLALNKIKTKLTISSYTNTTINLNKINIQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA KAINYQINPQQALMISGLVGIQYLKGQKTTFTLYVSSQLDIHRCKLENFIMNFNKRYLLAKFNYLNQDLEFVDHLITLNK DQKTNICIAGLGLLVINAHAEQICIRLPKSVGLKVAKYAII >Mature_361_residues MITNKKCKGCGAFLNDQINTIGYTPKINETKTNLCQRCFKLIHYNKLEKVSTNLNQSIKETINTLNFSNLQIFAVLDILD LEHTIIDELKEYQNKIIFLVNKIDLLPQRYNSELVNENVVKTLINHGFIDPKIIYVSTHSNTSLKKVMDYIKNATNKKQK SIFFGKSNVGKSSLINALLALNKIKTKLTISSYTNTTINLNKINIQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA KAINYQINPQQALMISGLVGIQYLKGQKTTFTLYVSSQLDIHRCKLENFIMNFNKRYLLAKFNYLNQDLEFVDHLITLNK DQKTNICIAGLGLLVINAHAEQICIRLPKSVGLKVAKYAII
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019988 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41162; Mature: 41162
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNKKCKGCGAFLNDQINTIGYTPKINETKTNLCQRCFKLIHYNKLEKVSTNLNQSIKE CCCCCCCCCCCHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINTLNFSNLQIFAVLDILDLEHTIIDELKEYQNKIIFLVNKIDLLPQRYNSELVNENVV HHHHCCCCCEEEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEHHHHCHHHHCHHHHHHHHH KTLINHGFIDPKIIYVSTHSNTSLKKVMDYIKNATNKKQKSIFFGKSNVGKSSLINALLA HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHH LNKIKTKLTISSYTNTTINLNKINIQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA HHHHHHEEEEEECCCCEEEEEEEECCHHEEECCCCCEECHHHHHHHCCCCCCEEEEEECC KAINYQINPQQALMISGLVGIQYLKGQKTTFTLYVSSQLDIHRCKLENFIMNFNKRYLLA EEEEEEECCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEE KFNYLNQDLEFVDHLITLNKDQKTNICIAGLGLLVINAHAEQICIRLPKSVGLKVAKYAI EHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHCCHHHCCCHHHEEC I C >Mature Secondary Structure MITNKKCKGCGAFLNDQINTIGYTPKINETKTNLCQRCFKLIHYNKLEKVSTNLNQSIKE CCCCCCCCCCCHHHCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TINTLNFSNLQIFAVLDILDLEHTIIDELKEYQNKIIFLVNKIDLLPQRYNSELVNENVV HHHHCCCCCEEEEEEEEHHCCHHHHHHHHHHHCCCEEEEEEHHHHCHHHHCHHHHHHHHH KTLINHGFIDPKIIYVSTHSNTSLKKVMDYIKNATNKKQKSIFFGKSNVGKSSLINALLA HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCHHHEEEECCCCCCHHHHHHHHHH LNKIKTKLTISSYTNTTINLNKINIQEHQILDAPGVCFDENILNYVRDEDNKSIMISYGA HHHHHHEEEEEECCCCEEEEEEEECCHHEEECCCCCEECHHHHHHHCCCCCCEEEEEECC KAINYQINPQQALMISGLVGIQYLKGQKTTFTLYVSSQLDIHRCKLENFIMNFNKRYLLA EEEEEEECCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEE KFNYLNQDLEFVDHLITLNKDQKTNICIAGLGLLVINAHAEQICIRLPKSVGLKVAKYAI EHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCHHHHHHHCCHHHCCCHHHEEC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]