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The map label for this gene is ruvB-1

Identifier: 13358001

GI number: 13358001

Start: 499537

End: 499866

Strand: Reverse

Name: ruvB-1

Synonym: UU438

Alternate gene names: 13358001

Gene position: 499866-499537 (Counterclockwise)

Preceding gene: 13358003

Following gene: 13357997

Centisome position: 66.5

GC content: 22.42

Gene sequence:

>330_bases
TTGATTGCTAATAATGCTAAAGGAATCCCACGATTAGCAAATCGATTGTTAAAACGAGTTGTAGATTTTAAAATTAATGG
GTTTAATGATATTAAAAGTATTTTTAAAAAAATTCAAATTTATGAGTTTGGATTAGATGAACAAGATATTAATTATCTAA
ATGTTTTATATCGACAAGATAATGAAATTGGTTTAAAATCAATTGCACAGATTTTACGTTTAGATCAATATACAATTGAA
ACAAAAATAGAACCTTATTTAATTCAACATCATTTTATAAATAAGAATTTAAGAGGTCGAAAAATTACAATTGAAGGAAT
AGATTTTTAA

Upstream 100 bases:

>100_bases
CCTTTAAATTTTAATAATATAAACAAATAATAAGTGTTTATACATATTAATTATAAAACAGTTTAAAAAACCTCTTGATT
TAAACGAAGAAGAAATTGAT

Downstream 100 bases:

>100_bases
AAAACAATCAATTAATCAAATAAAAATAATTGTTTTTTAACATTTTCTTTTTTTACTAATTTATTTAGTGAGATACCAAT
TAAACGTATTGTTTCATCTT

Product: holliday junction DNA helicase (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MIANNAKGIPRLANRLLKRVVDFKINGFNDIKSIFKKIQIYEFGLDEQDINYLNVLYRQDNEIGLKSIAQILRLDQYTIE
TKIEPYLIQHHFINKNLRGRKITIEGIDF

Sequences:

>Translated_109_residues
MIANNAKGIPRLANRLLKRVVDFKINGFNDIKSIFKKIQIYEFGLDEQDINYLNVLYRQDNEIGLKSIAQILRLDQYTIE
TKIEPYLIQHHFINKNLRGRKITIEGIDF
>Mature_109_residues
MIANNAKGIPRLANRLLKRVVDFKINGFNDIKSIFKKIQIYEFGLDEQDINYLNVLYRQDNEIGLKSIAQILRLDQYTIE
TKIEPYLIQHHFINKNLRGRKITIEGIDF

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 12865; Mature: 12865

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANNAKGIPRLANRLLKRVVDFKINGFNDIKSIFKKIQIYEFGLDEQDINYLNVLYRQD
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCC
NEIGLKSIAQILRLDQYTIETKIEPYLIQHHFINKNLRGRKITIEGIDF
CCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MIANNAKGIPRLANRLLKRVVDFKINGFNDIKSIFKKIQIYEFGLDEQDINYLNVLYRQD
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCC
NEIGLKSIAQILRLDQYTIETKIEPYLIQHHFINKNLRGRKITIEGIDF
CCCCHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA