| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is mraW
Identifier: 13357947
GI number: 13357947
Start: 443585
End: 444511
Strand: Direct
Name: mraW
Synonym: UU386
Alternate gene names: 13357947
Gene position: 443585-444511 (Clockwise)
Preceding gene: 13357946
Following gene: 13357948
Centisome position: 59.01
GC content: 24.6
Gene sequence:
>927_bases ATGGAATTTAATCAACACATTACCGTTTTATTAAACGAAACAATCGAATTATTAAATATTAAACCAGATGGCATTTATGT TGATTGTACATTTGGTCGTGGCGGACATTCACAACTCATCTTAAAAAAACTCTCAAAAAAAGGTAAATTAATTTGTTTAG ATCAAGATCAAGAAGCAATTAATTTTGCAAATAATTTATTTAAAAATAATACAAATGTAATTGTTATTAAAACAAACTTT AAAAATTTAAAATCAGCATTAAGTGCACATAAAATTTTTTATGTTGATGGCTTTATCTTTGATTTAGGTTTATCAAGTCC ACAACTTGATGATCCAAAAAGAGGTTTTAGTTATCATAAGAATGCTTGATTAGATATGCGAATGGATCAATCGCAAAACT TAAATGCTCACTATATTGTTAATAATTATTCTTTTGCAAAATTAGTAAGTATTTTTAAACGATATGGAGAAATAAAATAT CCAAAAATTATTGCTGATGCAATTGTTAAAGAACGCAGTATTAAAGAGATTAATACAACATTGGAATTAGTTGAAATCAT TAAAAAATATTCTCCTAAAAAAAATTTATTTGAAAAAAAACATCCTGCACGTTTATTTTTTCAAGCAATTAGAATAGAAG TTAATGATGAATTAAACATTTTAGAAAAAGCATTTAATGATGCTATTTCAATGTTAAATCCCTTAGGTGTTGTGGCAATT ATTAGCTTTCATAGTCTTGAAGATAAAATTGTTAAAAAGGTCTTTAATAATTATGCAAAAATTAAATTACCTAAAGAAGT CCCAATAAATAATTATGTAAATAAATATAGTTTATTGAATCAAAAAATTATGCCAAGCACCCAGGAACTAAATGATAACA ATCGTTCACGATCATCTATTTTAAGGGGATTAATTAGAAATTATTAA
Upstream 100 bases:
>100_bases ACAAATGATCGATATGAAATTTGGGCTAAAGAAGTTTATGATGATTTTAGCTTAAATCAAGAAAGTACGCTAAGTGATTT AGCTGAAAAATTATTAATTA
Downstream 100 bases:
>100_bases AAATGGAGGATTTTATTTATGAACAAACCAATGTGTTTGCTTCGTTTAGATAATTATTATTTTACATTGTTGGTATTTAT TTATAATGATGTAACTAAAG
Product: S-adenosyl-methyltransferase MraW
Products: NA
Alternate protein names: 16S rRNA m(4)C1402 methyltransferase; rRNA (cytosine-N(4)-)-methyltransferase RsmH [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MEFNQHITVLLNETIELLNIKPDGIYVDCTFGRGGHSQLILKKLSKKGKLICLDQDQEAINFANNLFKNNTNVIVIKTNF KNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHKNAWLDMRMDQSQNLNAHYIVNNYSFAKLVSIFKRYGEIKY PKIIADAIVKERSIKEINTTLELVEIIKKYSPKKNLFEKKHPARLFFQAIRIEVNDELNILEKAFNDAISMLNPLGVVAI ISFHSLEDKIVKKVFNNYAKIKLPKEVPINNYVNKYSLLNQKIMPSTQELNDNNRSRSSILRGLIRNY
Sequences:
>Translated_308_residues MEFNQHITVLLNETIELLNIKPDGIYVDCTFGRGGHSQLILKKLSKKGKLICLDQDQEAINFANNLFKNNTNVIVIKTNF KNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHKNA*LDMRMDQSQNLNAHYIVNNYSFAKLVSIFKRYGEIKY PKIIADAIVKERSIKEINTTLELVEIIKKYSPKKNLFEKKHPARLFFQAIRIEVNDELNILEKAFNDAISMLNPLGVVAI ISFHSLEDKIVKKVFNNYAKIKLPKEVPINNYVNKYSLLNQKIMPSTQELNDNNRSRSSILRGLIRNY >Mature_308_residues MEFNQHITVLLNETIELLNIKPDGIYVDCTFGRGGHSQLILKKLSKKGKLICLDQDQEAINFANNLFKNNTNVIVIKTNF KNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHKNA*LDMRMDQSQNLNAHYIVNNYSFAKLVSIFKRYGEIKY PKIIADAIVKERSIKEINTTLELVEIIKKYSPKKNLFEKKHPARLFFQAIRIEVNDELNILEKAFNDAISMLNPLGVVAI ISFHSLEDKIVKKVFNNYAKIKLPKEVPINNYVNKYSLLNQKIMPSTQELNDNNRSRSSILRGLIRNY
Specific function: Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA [H]
COG id: COG0275
COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RsmH family [H]
Homologues:
Organism=Homo sapiens, GI165377209, Length=336, Percent_Identity=34.8214285714286, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI165377202, Length=192, Percent_Identity=38.5416666666667, Blast_Score=110, Evalue=1e-24, Organism=Escherichia coli, GI1786270, Length=309, Percent_Identity=41.1003236245955, Blast_Score=235, Evalue=4e-63, Organism=Drosophila melanogaster, GI62472493, Length=331, Percent_Identity=34.1389728096677, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI28571637, Length=331, Percent_Identity=34.1389728096677, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002903 [H]
Pfam domain/function: PF01795 Methyltransf_5 [H]
EC number: NA
Molecular weight: Translated: 35354; Mature: 35354
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNQHITVLLNETIELLNIKPDGIYVDCTFGRGGHSQLILKKLSKKGKLICLDQDQEAI CCCCCHHHHEECCCEEHEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHH NFANNLFKNNTNVIVIKTNFKNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHK HHHHHHHCCCCCEEEEEECHHHHHHHHHHCEEEEEECEEEECCCCCCCCCCCCCCHHHHH NALDMRMDQSQNLNAHYIVNNYSFAKLVSIFKRYGEIKYPKIIADAIVKERSIKEINTTL HHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELVEIIKKYSPKKNLFEKKHPARLFFQAIRIEVNDELNILEKAFNDAISMLNPLGVVAII HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHH SFHSLEDKIVKKVFNNYAKIKLPKEVPINNYVNKYSLLNQKIMPSTQELNDNNRSRSSIL HHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH RGLIRNY HHHHHCC >Mature Secondary Structure MEFNQHITVLLNETIELLNIKPDGIYVDCTFGRGGHSQLILKKLSKKGKLICLDQDQEAI CCCCCHHHHEECCCEEHEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHH NFANNLFKNNTNVIVIKTNFKNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHK HHHHHHHCCCCCEEEEEECHHHHHHHHHHCEEEEEECEEEECCCCCCCCCCCCCCHHHHH NALDMRMDQSQNLNAHYIVNNYSFAKLVSIFKRYGEIKYPKIIADAIVKERSIKEINTTL HHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ELVEIIKKYSPKKNLFEKKHPARLFFQAIRIEVNDELNILEKAFNDAISMLNPLGVVAII HHHHHHHHCCCCHHHHHHCCHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCHHHHHHHH SFHSLEDKIVKKVFNNYAKIKLPKEVPINNYVNKYSLLNQKIMPSTQELNDNNRSRSSIL HHHHHHHHHHHHHHCCHHEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHH RGLIRNY HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA