| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357945
GI number: 13357945
Start: 441985
End: 443082
Strand: Direct
Name: Not Available
Synonym: UU384
Alternate gene names: NA
Gene position: 441985-443082 (Clockwise)
Preceding gene: 13357938
Following gene: 13357946
Centisome position: 58.8
GC content: 17.76
Gene sequence:
>1098_bases GTGATTAATAATTTATTTAAAACTAAAAATTATTATATTAGTTTTTTAATTTTAGCAACTAGTATTGCTTGCTGTTTCTA TTATAATAATTTTTGAATTTTAATAGTTAATATTTGTCAATTTTATTGATTATATTCAATTAAATTTAATTATAAAATTA TCATTTTAATCATTATATTCAGCGCTTTATGTATTATTTTGTGTTTATTAATTCACAAAGATTTTAATATACATTTTTTA GTTATAAATATCGAAAAAAAATATAATTACTCGTTACGAACACAAATTTTAATATATCTTAGTAAAAAGTACTCAAATGA AAATACTTTAATGTTAATTAAATTAATGATTTTTAATGAAAAGATTAACAGTGATTTTAAGCAAATTTTATATGATCTTA ATATCGCTCATTTATTTATTGTTTCAGGATTGCACTTGAATTTATTTATTCTAATCATTAATAAGATTTTTTCTAAACGA TGACCCAAAACAAGTTTTTTAATAGGAATATTATTTTTACTTTTTTATGGATATTTACTTGAATTTTCAATTGGTTTTAT TCGAGTTTTTATTATGCATATTTTATCAATTAAATTTTTTCAAAAAATTTCTAAAATGGATAAATTGGCAATTAGCGGAA TGTTAATTGGTTGTTTAAGTATTTATAATTTATCGATTTTGAGTTTTATTTTTGCATATTTAGCTTTATTTTGCATTTAC CTTATTAATATTTTTATAAAGAACAATTCGGTATTAAAAAATATTTACATAAATTTGTATATTTTATCAATCACTTTTGT CATTTCAATCAATTTAAACCAAAAAATCAATTTTTTAAGTATTGTTTTTGGTTATGTAATGAATTTACCAATTCTTTTTG TATATCAAATACTTTTTTGATTAATGTTTATTCCTCATTTTGAATTAATTTTAGATTTATTTACTAATACATTAGTAAAA TCTATTTATTTTATTAGTGAAATTGATGCGAGTATTCTAATTAAAGCTTACGTAAAAATTGTTACGATTTTTTATACGAC TATTTGAATAACAACTTCTCTTTGAATTTATTATAAAAAAATATTAAAAAAAGTATAA
Upstream 100 bases:
>100_bases ATTATAATAAAAAACAATTTAATAATGTTTGATTAAGCTTTCATATTTTGAATATAAATTATTTCTTTATTTGGCAAACA TTTAAATAAAGGGTGGTTTT
Downstream 100 bases:
>100_bases GAGTATACTATTTTTCAAATTCGTGATATATAATATAGTTGCCAAGTGTAAAAAAGTGGGGAAAAATGTATAAAAATGTT TATTGGTACTTATAATCATT
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MINNLFKTKNYYISFLILATSIACCFYYNNFWILIVNICQFYWLYSIKFNYKIIILIIIFSALCIILCLLIHKDFNIHFL VINIEKKYNYSLRTQILIYLSKKYSNENTLMLIKLMIFNEKINSDFKQILYDLNIAHLFIVSGLHLNLFILIINKIFSKR WPKTSFLIGILFLLFYGYLLEFSIGFIRVFIMHILSIKFFQKISKMDKLAISGMLIGCLSIYNLSILSFIFAYLALFCIY LINIFIKNNSVLKNIYINLYILSITFVISINLNQKINFLSIVFGYVMNLPILFVYQILFWLMFIPHFELILDLFTNTLVK SIYFISEIDASILIKAYVKIVTIFYTTIWITTSLWIYYKKILKKV
Sequences:
>Translated_365_residues MINNLFKTKNYYISFLILATSIACCFYYNNF*ILIVNICQFY*LYSIKFNYKIIILIIIFSALCIILCLLIHKDFNIHFL VINIEKKYNYSLRTQILIYLSKKYSNENTLMLIKLMIFNEKINSDFKQILYDLNIAHLFIVSGLHLNLFILIINKIFSKR *PKTSFLIGILFLLFYGYLLEFSIGFIRVFIMHILSIKFFQKISKMDKLAISGMLIGCLSIYNLSILSFIFAYLALFCIY LINIFIKNNSVLKNIYINLYILSITFVISINLNQKINFLSIVFGYVMNLPILFVYQILF*LMFIPHFELILDLFTNTLVK SIYFISEIDASILIKAYVKIVTIFYTTI*ITTSL*IYYKKILKKV >Mature_365_residues MINNLFKTKNYYISFLILATSIACCFYYNNF*ILIVNICQFY*LYSIKFNYKIIILIIIFSALCIILCLLIHKDFNIHFL VINIEKKYNYSLRTQILIYLSKKYSNENTLMLIKLMIFNEKINSDFKQILYDLNIAHLFIVSGLHLNLFILIINKIFSKR *PKTSFLIGILFLLFYGYLLEFSIGFIRVFIMHILSIKFFQKISKMDKLAISGMLIGCLSIYNLSILSFIFAYLALFCIY LINIFIKNNSVLKNIYINLYILSITFVISINLNQKINFLSIVFGYVMNLPILFVYQILF*LMFIPHFELILDLFTNTLVK SIYFISEIDASILIKAYVKIVTIFYTTI*ITTSL*IYYKKILKKV
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ComEC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004477 [H]
Pfam domain/function: PF03772 Competence [H]
EC number: NA
Molecular weight: Translated: 42229; Mature: 42229
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNLFKTKNYYISFLILATSIACCFYYNNFILIVNICQFYLYSIKFNYKIIILIIIFSA CCCCHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHH LCIILCLLIHKDFNIHFLVINIEKKYNYSLRTQILIYLSKKYSNENTLMLIKLMIFNEKI HHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHEEEEEECCCCCCCCEEEEEHHHHHHHH NSDFKQILYDLNIAHLFIVSGLHLNLFILIINKIFSKRPKTSFLIGILFLLFYGYLLEFS HHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGFIRVFIMHILSIKFFQKISKMDKLAISGMLIGCLSIYNLSILSFIFAYLALFCIYLIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFIKNNSVLKNIYINLYILSITFVISINLNQKINFLSIVFGYVMNLPILFVYQILFLMFI HHHCCCCEEHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH PHFELILDLFTNTLVKSIYFISEIDASILIKAYVKIVTIFYTTIITTSLIYYKKILKKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MINNLFKTKNYYISFLILATSIACCFYYNNFILIVNICQFYLYSIKFNYKIIILIIIFSA CCCCHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCHHHHHHHHHHH LCIILCLLIHKDFNIHFLVINIEKKYNYSLRTQILIYLSKKYSNENTLMLIKLMIFNEKI HHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHEEEEEECCCCCCCCEEEEEHHHHHHHH NSDFKQILYDLNIAHLFIVSGLHLNLFILIINKIFSKRPKTSFLIGILFLLFYGYLLEFS HHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGFIRVFIMHILSIKFFQKISKMDKLAISGMLIGCLSIYNLSILSFIFAYLALFCIYLIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFIKNNSVLKNIYINLYILSITFVISINLNQKINFLSIVFGYVMNLPILFVYQILFLMFI HHHCCCCEEHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH PHFELILDLFTNTLVKSIYFISEIDASILIKAYVKIVTIFYTTIITTSLIYYKKILKKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8675025; 8948633 [H]