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The map label for this gene is tnp-1

Identifier: 13357932

GI number: 13357932

Start: 425870

End: 426493

Strand: Reverse

Name: tnp-1

Synonym: UU372

Alternate gene names: 13357932

Gene position: 426493-425870 (Counterclockwise)

Preceding gene: 13357933

Following gene: 13357927

Centisome position: 56.74

GC content: 25.16

Gene sequence:

>624_bases
ATGAATAAATTGGGTTTGCTATGCGAAATAAGAAGAAGCAAAAGAAAAAGAGAAATAAAGAATGTTAATGCAACATTCAA
AAACTTAGCCAATAGAGATTATGATGGCCAAATGAATGATATATATGCTACCGATGTGACATATATTCCTTCACCCACTG
ATGTTATAGAAAATCATGTATATTTATCGGTTTTATTGCATCATAAAACAAAGAAAATTGTGAGCTGGAATTTATCAAAA
TATAATGATACTAATCTTGTTTTAAAACATTTTAAACTAACTAAATTTCCTAAAAAATTCATTGTACATTCAGATCACGG
ATATCAATATTCCTCTAAGGAATTCCTTGATTACATAGATTCAATTAATGGCACTATTTCTATGTCAAGAGTTGGAAATT
CTTTGGATAATAGAGAAGTAGAATATTTCTTTTCTATTCTAAAAACTGAAATATTTTCAAATTTTTTTCAAAAAGCAAAA
AGTTTAACATTTAATGAATTGCAAATAGAAATAGACAAATTTATTAATTTGTATAATAATGAAAGATTTATCAAAAAATT
TGATTTAAAAACACCCCAACAAATGTGGGATGTTTATATGAACAATAAATCTATTTGAGTCTAA

Upstream 100 bases:

>100_bases
TTTATTGAATGCAAAGGAAGATTTGGAAGGGAAAGACTTTCACTTTTTTTAAAAGAAAAAGTACCAAATCGATATAAATC
CAAGGACTCTGGGCAGAATT

Downstream 100 bases:

>100_bases
ATTTTTTGTCCTAGTTTACAATGGTGGTTTTTTATTTTGTTAGTAATTGCTTTAACAAGCTATAAATATTTATAACAATA
GGTTTAATCTATCATTAAAA

Product: integrase-recombinase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNKLGLLCEIRRSKRKREIKNVNATFKNLANRDYDGQMNDIYATDVTYIPSPTDVIENHVYLSVLLHHKTKKIVSWNLSK
YNDTNLVLKHFKLTKFPKKFIVHSDHGYQYSSKEFLDYIDSINGTISMSRVGNSLDNREVEYFFSILKTEIFSNFFQKAK
SLTFNELQIEIDKFINLYNNERFIKKFDLKTPQQMWDVYMNNKSIWV

Sequences:

>Translated_207_residues
MNKLGLLCEIRRSKRKREIKNVNATFKNLANRDYDGQMNDIYATDVTYIPSPTDVIENHVYLSVLLHHKTKKIVSWNLSK
YNDTNLVLKHFKLTKFPKKFIVHSDHGYQYSSKEFLDYIDSINGTISMSRVGNSLDNREVEYFFSILKTEIFSNFFQKAK
SLTFNELQIEIDKFINLYNNERFIKKFDLKTPQQMWDVYMNNKSI*V
>Mature_207_residues
MNKLGLLCEIRRSKRKREIKNVNATFKNLANRDYDGQMNDIYATDVTYIPSPTDVIENHVYLSVLLHHKTKKIVSWNLSK
YNDTNLVLKHFKLTKFPKKFIVHSDHGYQYSSKEFLDYIDSINGTISMSRVGNSLDNREVEYFFSILKTEIFSNFFQKAK
SLTFNELQIEIDKFINLYNNERFIKKFDLKTPQQMWDVYMNNKSI*V

Specific function: Probably involved in the transposition of insertion sequence IS1353 [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=197, Percent_Identity=28.9340101522843, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 24459; Mature: 24459

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLGLLCEIRRSKRKREIKNVNATFKNLANRDYDGQMNDIYATDVTYIPSPTDVIENHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCHHHHHHHH
YLSVLLHHKTKKIVSWNLSKYNDTNLVLKHFKLTKFPKKFIVHSDHGYQYSSKEFLDYID
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHH
SINGTISMSRVGNSLDNREVEYFFSILKTEIFSNFFQKAKSLTFNELQIEIDKFINLYNN
HCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
ERFIKKFDLKTPQQMWDVYMNNKSIV
CHHHHHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKLGLLCEIRRSKRKREIKNVNATFKNLANRDYDGQMNDIYATDVTYIPSPTDVIENHV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCHHHHHHHH
YLSVLLHHKTKKIVSWNLSKYNDTNLVLKHFKLTKFPKKFIVHSDHGYQYSSKEFLDYID
HHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCHHHEEECCCCCCCCHHHHHHHHH
SINGTISMSRVGNSLDNREVEYFFSILKTEIFSNFFQKAKSLTFNELQIEIDKFINLYNN
HCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
ERFIKKFDLKTPQQMWDVYMNNKSIV
CHHHHHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8755869; 12499211 [H]