Definition Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome.
Accession NC_002162
Length 751,719

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Identifier: 13357883

GI number: 13357883

Start: 369128

End: 369823

Strand: Reverse

Name: Not Available

Synonym: UU323

Alternate gene names: NA

Gene position: 369823-369128 (Counterclockwise)

Preceding gene: 13357884

Following gene: 13357875

Centisome position: 49.2

GC content: 19.25

Gene sequence:

>696_bases
ATGTTAAGTTTTGTTAAAGAATTAAATTTTGAAATTAATCAAAAAAAATATTTTATTAAAATTTATTTACAACCAAGAAT
TAAATATATTAAAATCAAAATCATTAATCATCAAATTGTTTGTTTGATCAATCACTTAAAATTAATTAATATTGCTGAAG
AATTTATTAAAAATAATAAGTTAAAAATTTTAAAAATATATGAAAATGACTTAAAGAAAATTAAGTATGATGAACAATCT
TTAGATTGAATCATCTTATTAGGAATAAAATTTACGACTATAAAAATAAAAAATAACAATTTTCATTGTCAATTCAATTT
TCAAAAACAAATCATTTATCTTTATGATCAAAATCAGAATTTAACTAATACAAAATTGCTTTATCAAAAAATTTTAATAT
ACCTAGCAGAAATAATTTTTCCACAAATTATTAAAAATGCCCAAAATATAACTACTCTAACTGTAAAAAAATATGTATTT
GGCTTTTACAAAAGCCAATGAGGTGTCTATAATAAAATAAAACACACGATTGGCCTTTCGTATTTTTTAGTTCATTATGA
TCAAGATATCATTAATTATGTTGTTATTCATGAATTAGCCCACATAAAATATCAACATCATCAAAAATCCTTTTGGGACT
TTGTTTTAAAATATTGTAAAAATGCAAAAATATACAACAATCAACTTAAATTTTAA

Upstream 100 bases:

>100_bases
ACAAAAAGAAGGTAAAAAACGTCTAAAAGCGATTGGTAATGTTGATGTTCCTCAAGATGCTTTTGTAAAAGTTTTAAGTG
AAAACTAATATATATTATTT

Downstream 100 bases:

>100_bases
TATTTAAAAATGATTATAATATTAAGATAAATACAATAAAAAATTAATTAAAAAAGATAGGAGTATGACCCTATCTTTTT
TAATAATATATGTGTGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MLSFVKELNFEINQKKYFIKIYLQPRIKYIKIKIINHQIVCLINHLKLINIAEEFIKNNKLKILKIYENDLKKIKYDEQS
LDWIILLGIKFTTIKIKNNNFHCQFNFQKQIIYLYDQNQNLTNTKLLYQKILIYLAEIIFPQIIKNAQNITTLTVKKYVF
GFYKSQWGVYNKIKHTIGLSYFLVHYDQDIINYVVIHELAHIKYQHHQKSFWDFVLKYCKNAKIYNNQLKF

Sequences:

>Translated_231_residues
MLSFVKELNFEINQKKYFIKIYLQPRIKYIKIKIINHQIVCLINHLKLINIAEEFIKNNKLKILKIYENDLKKIKYDEQS
LD*IILLGIKFTTIKIKNNNFHCQFNFQKQIIYLYDQNQNLTNTKLLYQKILIYLAEIIFPQIIKNAQNITTLTVKKYVF
GFYKSQ*GVYNKIKHTIGLSYFLVHYDQDIINYVVIHELAHIKYQHHQKSFWDFVLKYCKNAKIYNNQLKF
>Mature_231_residues
MLSFVKELNFEINQKKYFIKIYLQPRIKYIKIKIINHQIVCLINHLKLINIAEEFIKNNKLKILKIYENDLKKIKYDEQS
LD*IILLGIKFTTIKIKNNNFHCQFNFQKQIIYLYDQNQNLTNTKLLYQKILIYLAEIIFPQIIKNAQNITTLTVKKYVF
GFYKSQ*GVYNKIKHTIGLSYFLVHYDQDIINYVVIHELAHIKYQHHQKSFWDFVLKYCKNAKIYNNQLKF

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27718; Mature: 27718

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFVKELNFEINQKKYFIKIYLQPRIKYIKIKIINHQIVCLINHLKLINIAEEFIKNNK
CCCHHHHCCCEECCEEEEEEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHCCCC
LKILKIYENDLKKIKYDEQSLDIILLGIKFTTIKIKNNNFHCQFNFQKQIIYLYDQNQNL
EEEEEEEHHHHHHEECCCCCCCEEEEEEEEEEEEEECCEEEEEEEECEEEEEEEECCCCC
TNTKLLYQKILIYLAEIIFPQIIKNAQNITTLTVKKYVFGFYKSQGVYNKIKHTIGLSYF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHCCEEE
LVHYDQDIINYVVIHELAHIKYQHHQKSFWDFVLKYCKNAKIYNNQLKF
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC
>Mature Secondary Structure
MLSFVKELNFEINQKKYFIKIYLQPRIKYIKIKIINHQIVCLINHLKLINIAEEFIKNNK
CCCHHHHCCCEECCEEEEEEEEEECCEEEEEEEEECCEEEEEEHHHHHHHHHHHHHCCCC
LKILKIYENDLKKIKYDEQSLDIILLGIKFTTIKIKNNNFHCQFNFQKQIIYLYDQNQNL
EEEEEEEHHHHHHEECCCCCCCEEEEEEEEEEEEEECCEEEEEEEECEEEEEEEECCCCC
TNTKLLYQKILIYLAEIIFPQIIKNAQNITTLTVKKYVFGFYKSQGVYNKIKHTIGLSYF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHCCEEE
LVHYDQDIINYVVIHELAHIKYQHHQKSFWDFVLKYCKNAKIYNNQLKF
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA