Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699223

Identifier: 126699223

GI number: 126699223

Start: 1874544

End: 1875308

Strand: Direct

Name: 126699223

Synonym: CD1619

Alternate gene names: NA

Gene position: 1874544-1875308 (Clockwise)

Preceding gene: 126699222

Following gene: 126699224

Centisome position: 43.69

GC content: 26.54

Gene sequence:

>765_bases
ATGTTAGGTAAATTATTAAAATATGAGTTAAAAGCAAGTGGAAGAATATTTATACCGTTATATATAGCCATATTGATAGT
AGCTGTATTTAATGGAATATTTATGAATACAAATATACTTCAGGTACAGGGAATAGGAATACTAGTATTAACAAGTCTTT
TTATGGCATTAGGAGTTTTAACTATTGTAGTTACAATTCAAAGATTTAGAAAAAATCTTTTGGGGGATGAAGGTTATTTA
ATGTTTACTCTTCCTGTTAGCACTAGTTCACTTATATTATCTAAATGTATAACAGCACTTATATACGCTGTACTTAGTTT
TATAGTTGCAGTATTCACTTTTGGAGTTCTTATGCTTTTTGGTACTTCTGGAATTTTACTACCTGAAATTTTAGATTTGT
TTAACACTAGTTTTAAATGGATTTCTGAAAACTTTTTAGATATTTTATTATTAGTAGTAGTAATGTTTATTTCGTATTCA
TCATTTATTTTGTTATTATATACATCAATCTCAATGGGACAATTACCAAAATTCAATAAACATAGAAACATAGTGGCATT
TGCTTCTTTTATAGCTATAAATATAGTAATATCAATTGTTGGAGATGCAGTTGGAAGCATCTTACCAAATGAAGATACAA
ATATGGTATATCATCTTTATCAGAGTCCTAGTTTTATGCTTGCAATACTTGGTAGTCTTGTAGTTGCAATAGCGTTATTT
TTCGCTACAAAATTTATATTAGATAAAAAATTAAATTTAGAATAA

Upstream 100 bases:

>100_bases
TATTCATATCAAAAGGAGAAATAGTGTTACAAGGAGACGTTGAAGCAATAAGAGAAGAAAAAGGAAAATCTATAGATGCA
TTATTTAGGGAGGAATTTAA

Downstream 100 bases:

>100_bases
ATGTTTTTATATGGAGCTATCTTTTGAGTAATGTTAAAAGATGGCTCTTATTATTTATGTAGTTAATTCATGTATATAAT
ATGAATAGTGTTTTATTTCT

Product: ABC transporter permease

Products: NA

Alternate protein names: ABC Transporter Permease; Permease; ABC Transporter Peremase Protein; ABC Transporter Membrane-Spanning Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVLTIVVTIQRFRKNLLGDEGYL
MFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLFGTSGILLPEILDLFNTSFKWISENFLDILLLVVVMFISYS
SFILLLYTSISMGQLPKFNKHRNIVAFASFIAINIVISIVGDAVGSILPNEDTNMVYHLYQSPSFMLAILGSLVVAIALF
FATKFILDKKLNLE

Sequences:

>Translated_254_residues
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVLTIVVTIQRFRKNLLGDEGYL
MFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLFGTSGILLPEILDLFNTSFKWISENFLDILLLVVVMFISYS
SFILLLYTSISMGQLPKFNKHRNIVAFASFIAINIVISIVGDAVGSILPNEDTNMVYHLYQSPSFMLAILGSLVVAIALF
FATKFILDKKLNLE
>Mature_254_residues
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVLTIVVTIQRFRKNLLGDEGYL
MFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLFGTSGILLPEILDLFNTSFKWISENFLDILLLVVVMFISYS
SFILLLYTSISMGQLPKFNKHRNIVAFASFIAINIVISIVGDAVGSILPNEDTNMVYHLYQSPSFMLAILGSLVVAIALF
FATKFILDKKLNLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28132; Mature: 28132

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVL
CCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
TIVVTIQRFRKNLLGDEGYLMFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLF
HHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTSGILLPEILDLFNTSFKWISENFLDILLLVVVMFISYSSFILLLYTSISMGQLPKFNK
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HRNIVAFASFIAINIVISIVGDAVGSILPNEDTNMVYHLYQSPSFMLAILGSLVVAIALF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
FATKFILDKKLNLE
HHHHHHHHHCCCCC
>Mature Secondary Structure
MLGKLLKYELKASGRIFIPLYIAILIVAVFNGIFMNTNILQVQGIGILVLTSLFMALGVL
CCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
TIVVTIQRFRKNLLGDEGYLMFTLPVSTSSLILSKCITALIYAVLSFIVAVFTFGVLMLF
HHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTSGILLPEILDLFNTSFKWISENFLDILLLVVVMFISYSSFILLLYTSISMGQLPKFNK
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
HRNIVAFASFIAINIVISIVGDAVGSILPNEDTNMVYHLYQSPSFMLAILGSLVVAIALF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
FATKFILDKKLNLE
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA