Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126698635

Identifier: 126698635

GI number: 126698635

Start: 1244382

End: 1245071

Strand: Direct

Name: 126698635

Synonym: CD1051

Alternate gene names: NA

Gene position: 1244382-1245071 (Clockwise)

Preceding gene: 126698634

Following gene: 126698636

Centisome position: 29.0

GC content: 21.59

Gene sequence:

>690_bases
ATGATGTTCAATTTAATAAGAAAAGATTTAATAATAGGGATTAGTTCAGATGGTATCCGTAATTTAAAGTACATATTGCT
ATTTTTTGTGTTTTATTTTTTCCTTAATTCAATTTCATATTATACAGTAAGTATTGTTGTTAGTTATTTGATATTTATAA
ATACGTTTGAGTGTGATTATGAAAATGATTCAAGGATTTTTATAAGGAGTATGCCAGTTAGTATAGAAGATATAGTTTAC
TCAAAATATTTATTAGGTGTAGGATTAATAATTTCTGTAACAATAATTGTGTCCTTACTAAGTAAATTGACATCACTAGT
GTTCTTTAGAAATATGGTTTTAAATGATGTATTTTTTTCTGTAAATATATTTTTAGCAATTTTGACGATTTTACTGCCTT
TAATTTTTAAGTTTGGATATGGAAAAATGAAAGTTTGTGGTTTTATAGTAAGTATTTTAATTTACTTTGTATATGGAAGT
CTTTTGAAGATGATTAGTATGATTGTATATCAAGTAAAGCATTTTAATTATAGTAAAGTTGGAGGAGTATATCTTTCAAA
TTATGTAACTGATATAGCTAATACTAAGTATATAAATTTATATAGTATGACATTTTTAACAATAATAATTTTTATAATAT
CAATGTATTTTTCTATTAAGATTTCAAAAAAGAATAAGTTTAATTATTAA

Upstream 100 bases:

>100_bases
ATAGCTTGAAAGTAAAAAGCCTATTGATAGAAATTGATAAGCATAAGGTCAAAAATCCTACTATAGAAGAACTAATGTAT
TATTATGTAAATGAGGTGAG

Downstream 100 bases:

>100_bases
AATTTTGATTAATATTATAGCACAATAGCACAAAATATAAGGAGACTAAAAATGAAGAAGTTTATAAAAGTTTCATTTTT
TATTTTGGGGATTTTTACAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY
SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS
LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY

Sequences:

>Translated_229_residues
MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY
SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS
LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY
>Mature_229_residues
MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY
SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS
LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26655; Mature: 26655

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDY
CHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
ENDSRIFIRSMPVSIEDIVYSKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGSLLKMISMIVYQVKHFNYSKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
GGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDY
CHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
ENDSRIFIRSMPVSIEDIVYSKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFS
CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGSLLKMISMIVYQVKHFNYSKV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
GGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY
HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA