Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is 126698635
Identifier: 126698635
GI number: 126698635
Start: 1244382
End: 1245071
Strand: Direct
Name: 126698635
Synonym: CD1051
Alternate gene names: NA
Gene position: 1244382-1245071 (Clockwise)
Preceding gene: 126698634
Following gene: 126698636
Centisome position: 29.0
GC content: 21.59
Gene sequence:
>690_bases ATGATGTTCAATTTAATAAGAAAAGATTTAATAATAGGGATTAGTTCAGATGGTATCCGTAATTTAAAGTACATATTGCT ATTTTTTGTGTTTTATTTTTTCCTTAATTCAATTTCATATTATACAGTAAGTATTGTTGTTAGTTATTTGATATTTATAA ATACGTTTGAGTGTGATTATGAAAATGATTCAAGGATTTTTATAAGGAGTATGCCAGTTAGTATAGAAGATATAGTTTAC TCAAAATATTTATTAGGTGTAGGATTAATAATTTCTGTAACAATAATTGTGTCCTTACTAAGTAAATTGACATCACTAGT GTTCTTTAGAAATATGGTTTTAAATGATGTATTTTTTTCTGTAAATATATTTTTAGCAATTTTGACGATTTTACTGCCTT TAATTTTTAAGTTTGGATATGGAAAAATGAAAGTTTGTGGTTTTATAGTAAGTATTTTAATTTACTTTGTATATGGAAGT CTTTTGAAGATGATTAGTATGATTGTATATCAAGTAAAGCATTTTAATTATAGTAAAGTTGGAGGAGTATATCTTTCAAA TTATGTAACTGATATAGCTAATACTAAGTATATAAATTTATATAGTATGACATTTTTAACAATAATAATTTTTATAATAT CAATGTATTTTTCTATTAAGATTTCAAAAAAGAATAAGTTTAATTATTAA
Upstream 100 bases:
>100_bases ATAGCTTGAAAGTAAAAAGCCTATTGATAGAAATTGATAAGCATAAGGTCAAAAATCCTACTATAGAAGAACTAATGTAT TATTATGTAAATGAGGTGAG
Downstream 100 bases:
>100_bases AATTTTGATTAATATTATAGCACAATAGCACAAAATATAAGGAGACTAAAAATGAAGAAGTTTATAAAAGTTTCATTTTT TATTTTGGGGATTTTTACAC
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY
Sequences:
>Translated_229_residues MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY >Mature_229_residues MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDYENDSRIFIRSMPVSIEDIVY SKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFSVNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGS LLKMISMIVYQVKHFNYSKVGGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26655; Mature: 26655
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDY CHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC ENDSRIFIRSMPVSIEDIVYSKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFS CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGSLLKMISMIVYQVKHFNYSKV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure MMFNLIRKDLIIGISSDGIRNLKYILLFFVFYFFLNSISYYTVSIVVSYLIFINTFECDY CHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC ENDSRIFIRSMPVSIEDIVYSKYLLGVGLIISVTIIVSLLSKLTSLVFFRNMVLNDVFFS CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNIFLAILTILLPLIFKFGYGKMKVCGFIVSILIYFVYGSLLKMISMIVYQVKHFNYSKV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH GGVYLSNYVTDIANTKYINLYSMTFLTIIIFIISMYFSIKISKKNKFNY HHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA