Definition | Clostridium difficile 630 chromosome, complete genome. |
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Accession | NC_009089 |
Length | 4,290,252 |
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The map label for this gene is mnaA [H]
Identifier: 126698617
GI number: 126698617
Start: 1206797
End: 1207921
Strand: Direct
Name: mnaA [H]
Synonym: CD1033
Alternate gene names: 126698617
Gene position: 1206797-1207921 (Clockwise)
Preceding gene: 126698616
Following gene: 126698618
Centisome position: 28.13
GC content: 29.51
Gene sequence:
>1125_bases ATGAATGACATCAAGGTTATGACTGTATTTGGAACTAGACCTGAAGCTATCAAAGTAGCACCTTTAATAAAGGAACTTGA AAAAAGAGAGAATATAAAAAGTATTGTTTGCGTTACAGCTCAACATAGAGAAATGCTTGACCAAGTTATAGAAACCTTTA ATATAAATGTAGACTATGATTTGGATATAATGGAAAAAGGACAAAGCCTGAATGATATAACATGTAAGATTTTAAATAAA CTTCCCTTGATTTTAAACAAGGAAAATCCAAATATAATATTGGTACATGGAGATACAACCACAACTCTAGCTACAAGTTT GACTGCATTTTATAATAAAACTCTTGTTGGTCATATAGAAGCTGGGCTTAGAACCTATGATAAATATTCTCCTTTTCCAG AGGAGTTAAATAGACAACTTACAGGTATTATTGCTGATATGCACTTTGCTCCTACTAATTTGGCTAGAAAAAACTTGATT TCTGAAGGAAAACCTAATAATAATATATTTGTAACTGGTAATACTGCTATTGATGCTTTAAAGATGACAATAAAAGAAAA CTATAATCATCCTATAATTGATGAGATTGGTAACGATAGGATGATTTTGTTAACCTCTCACAGAAGAGAAAATTTGGGTA AACCTATGAAAAATATATTCAGAGCTATAAAGCGAATAGTAGATGACTTTGAAGATGTACAGATAGTATATCCCATACAT TTAAATCCTAAAATACGAACTATAGCTGATGAGATATTTGGAAAATTTCCTGAAAAAATTCATATTATAGAGCCTTTAGA TGTAGCTGATTTTCATAACTTTTTAAATAAATCTTATATGATAATGACTGATAGTGGAGGAATACAGGAAGAAGCTCCAT CATTAGGTAAGCCAGTTCTTGTGTTGCGTGATAAAACAGAAAGAACAGAAGGAATTGAAGCAAAGACACTTAAATTAGTA GGTACTAATGAAGATAGAATATATAATTCAGTGAGCGATTTATTAATAAATAAAGATAACTATGTTCAGATGAGTAAAGC ATCTAATCCATATGGAGATGGAAATGCAAGCAAATATATAGTGGATATAATAATTAAAAAATTTAATTGCAAATATTTAA ATTAG
Upstream 100 bases:
>100_bases ACCCATCAAAAGAGAGTATAAAAGTTATTAAGTCTTGGTATGAATAATTTTGAAAGTGTAGAATTTATATAGATTAAATA GATGATTAGGAGAGATATAA
Downstream 100 bases:
>100_bases ATAAGGCCTAAAACATTAACTAATTGATATAAGATTTATGATAATATTAAGGAATACAATTTTTAAGGGGGAGTAATATG GCTAGAAAATTAATAAAAAA
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYDLDIMEKGQSLNDITCKILNK LPLILNKENPNIILVHGDTTTTLATSLTAFYNKTLVGHIEAGLRTYDKYSPFPEELNRQLTGIIADMHFAPTNLARKNLI SEGKPNNNIFVTGNTAIDALKMTIKENYNHPIIDEIGNDRMILLTSHRRENLGKPMKNIFRAIKRIVDDFEDVQIVYPIH LNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYMIMTDSGGIQEEAPSLGKPVLVLRDKTERTEGIEAKTLKLV GTNEDRIYNSVSDLLINKDNYVQMSKASNPYGDGNASKYIVDIIIKKFNCKYLN
Sequences:
>Translated_374_residues MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYDLDIMEKGQSLNDITCKILNK LPLILNKENPNIILVHGDTTTTLATSLTAFYNKTLVGHIEAGLRTYDKYSPFPEELNRQLTGIIADMHFAPTNLARKNLI SEGKPNNNIFVTGNTAIDALKMTIKENYNHPIIDEIGNDRMILLTSHRRENLGKPMKNIFRAIKRIVDDFEDVQIVYPIH LNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYMIMTDSGGIQEEAPSLGKPVLVLRDKTERTEGIEAKTLKLV GTNEDRIYNSVSDLLINKDNYVQMSKASNPYGDGNASKYIVDIIIKKFNCKYLN >Mature_374_residues MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYDLDIMEKGQSLNDITCKILNK LPLILNKENPNIILVHGDTTTTLATSLTAFYNKTLVGHIEAGLRTYDKYSPFPEELNRQLTGIIADMHFAPTNLARKNLI SEGKPNNNIFVTGNTAIDALKMTIKENYNHPIIDEIGNDRMILLTSHRRENLGKPMKNIFRAIKRIVDDFEDVQIVYPIH LNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYMIMTDSGGIQEEAPSLGKPVLVLRDKTERTEGIEAKTLKLV GTNEDRIYNSVSDLLINKDNYVQMSKASNPYGDGNASKYIVDIIIKKFNCKYLN
Specific function: Catalyzes the conversion of UDP-N-acetylglucosamine into UDP-N-acetylmannosamine, a precursor of the teichoic acid linkage unit [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=372, Percent_Identity=51.8817204301075, Blast_Score=363, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 42489; Mature: 42489
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYD CCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCC LDIMEKGQSLNDITCKILNKLPLILNKENPNIILVHGDTTTTLATSLTAFYNKTLVGHIE CHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTYDKYSPFPEELNRQLTGIIADMHFAPTNLARKNLISEGKPNNNIFVTGNTAIDAL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHH KMTIKENYNHPIIDEIGNDRMILLTSHRRENLGKPMKNIFRAIKRIVDDFEDVQIVYPIH HHHHHHCCCCCCHHHCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEE LNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYMIMTDSGGIQEEAPSLGKPVL CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE VLRDKTERTEGIEAKTLKLVGTNEDRIYNSVSDLLINKDNYVQMSKASNPYGDGNASKYI EEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH VDIIIKKFNCKYLN EEEHHHHCCCEECC >Mature Secondary Structure MNDIKVMTVFGTRPEAIKVAPLIKELEKRENIKSIVCVTAQHREMLDQVIETFNINVDYD CCCEEEEEEECCCCCCEEHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCC LDIMEKGQSLNDITCKILNKLPLILNKENPNIILVHGDTTTTLATSLTAFYNKTLVGHIE CHHHHCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH AGLRTYDKYSPFPEELNRQLTGIIADMHFAPTNLARKNLISEGKPNNNIFVTGNTAIDAL HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHH KMTIKENYNHPIIDEIGNDRMILLTSHRRENLGKPMKNIFRAIKRIVDDFEDVQIVYPIH HHHHHHCCCCCCHHHCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEEE LNPKIRTIADEIFGKFPEKIHIIEPLDVADFHNFLNKSYMIMTDSGGIQEEAPSLGKPVL CCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE VLRDKTERTEGIEAKTLKLVGTNEDRIYNSVSDLLINKDNYVQMSKASNPYGDGNASKYI EEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHH VDIIIKKFNCKYLN EEEHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8126437; 12107153; 9384377 [H]